Equivalence class NR_3.5_88517.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4JNG|1|L (rep) | RNA (42-MER) | Schmallenberg virus nucleoprotein-RNA complex | X-ray diffraction | 2.12 | 2013-07-31 | ||||
| 2 | 5UK4|1|x | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 3 | 5UK4|1|v | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 4 | 5UK4|1|w | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 5 | 5UK4|1|u | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 6 | 4BHH|1|R | POLY-URIDINE 45-MER | synthetic construct | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-ray diffraction | 3.4 | 2013-04-24 | |||
| 7 | 4J1G|1|E | RNA (45-MER) | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-ray diffraction | 2.79 | 2013-04-10 | ||||
| 8 | 3ZLA|1|I | RNA | Escherichia coli | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | |||
| 9 | 3ZLA|1|J | RNA | Escherichia coli | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | |||
| 10 | 3PU4|1|R | RNA (45-MER) | synthetic construct | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-ray diffraction | 3 | 2011-01-12 | |||
| 11 | 2GIC|1|R | 45-MER | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-ray diffraction | 2.92 | 2006-08-22 | ||||
| 12 | 3HHZ|1|R | RNA (45-MER) | Escherichia coli | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-ray diffraction | 3.5 | 2009-07-28 |
Release history
| Release | 2.124 | 2.125 | 2.126 | 2.127 | 2.128 | 2.129 | 2.130 | 2.131 | 2.132 | 2.133 | 2.134 | 2.135 | 2.136 | 2.137 | 2.138 | 2.139 | 2.140 | 2.141 | 2.142 | 2.143 | 2.144 | 2.145 | 2.146 | 2.147 | 2.148 | 2.149 | 2.150 | 2.151 | 2.152 | 2.153 | 2.154 | 2.155 | 2.156 | 2.157 | 2.158 | 3.0 | 3.1 | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-04-26 | 2017-04-29 | 2017-05-09 | 2017-05-15 | 2017-05-20 | 2017-05-27 | 2017-06-07 | 2017-06-11 | 2017-06-21 | 2017-06-24 | 2017-06-28 | 2017-07-04 | 2017-07-10 | 2017-07-15 | 2017-07-26 | 2017-07-31 | 2017-08-05 | 2017-08-12 | 2017-08-19 | 2017-08-26 | 2017-09-03 | 2017-09-09 | 2017-09-16 | 2017-09-23 | 2017-09-30 | 2017-10-07 | 2017-10-14 | 2017-10-21 | 2017-10-28 | 2017-11-03 | 2017-11-10 | 2017-11-17 | 2017-11-24 | 2017-12-01 | 2017-12-08 | 2017-12-15 | 2017-12-22 | 2017-12-29 | 2018-01-05 | 2018-01-12 | 2018-01-19 | 2018-01-26 | 2018-02-02 | 2018-02-09 | 2018-02-16 | 2018-02-23 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 5UK4|1|u | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 | |
| 2 | 5UK4|1|v | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 | |
| 3 | 5UK4|1|w | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 | |
| 4 | 5UK4|1|x | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 | |
| 5 | 3PU4|1|R | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-RAY DIFFRACTION | 3 | 45 | |
| 6 | 3HHZ|1|R | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-RAY DIFFRACTION | 3.5 | 45 | |
| 7 | 2GIC|1|R | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-RAY DIFFRACTION | 2.92 | 45 | |
| 8 | 4JNG|1|L | Schmallenberg virus nucleoprotein-RNA complex | X-RAY DIFFRACTION | 2.12 | 42 | |
| 9 | 3ZLA|1|J | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 | |
| 10 | 3ZLA|1|I | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 | |
| 11 | 4J1G|1|E | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-RAY DIFFRACTION | 2.79 | 45 | |
| 12 | 4BHH|1|R | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-RAY DIFFRACTION | 3.4 | 44 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: