#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14FE5|1|B (rep)xpt-pbuX guanine riboswitch aptamer domainCrystal structure of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-ray diffraction1.322012-06-27
23FO4|1|AGuanine riboswitch C74U mutantCrystal structure of guanine riboswitch C74U mutant bound to 6-chloroguanineX-ray diffraction1.92009-06-23
33GOG|1|AGuanine riboswitchGuanine riboswitch A21G,U75C mutant bound to 6-chloroguanineX-ray diffraction2.12009-06-23
42XNZ|1|APurine riboswitchGuanine riboswitchBacillus subtilisBacteriaRF00167xpt-pbuX C74U Riboswitch from B. subtilis bound to acetoguanamine identified by virtual screeningX-ray diffraction1.592011-04-06
52EEV|1|Aguanine riboswitchGuanine riboswitch U22C, A52G mutant bound to hypoxanthineX-ray diffraction1.952007-11-13
62G9C|1|Aguanine riboswitchModified pyrimidines Specifically bind the purine riboswitchX-ray diffraction1.72006-11-21
73FO6|1|AGuanine riboswitchCrystal structure of guanine riboswitch bound to 6-O-methylguanineX-ray diffraction1.92009-06-23
83GAO|1|AGuanine riboswitchCrystal structure of the guanine riboswitch bound to xanthine.X-ray diffraction1.92009-06-23
93GER|1|AGuanine riboswitchGuanine riboswitch bound to 6-chloroguanineX-ray diffraction1.72009-06-23
102EET|1|AGuanine RiboswitchGuanine Riboswitch A21G, U75C mutant bound to hypoxanthineX-ray diffraction1.952007-11-13
114FEN|1|BA24U/U25A/A46G mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainCrystal structure of the A24U/U25A/A46G mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-ray diffraction1.352013-02-27
124FEO|1|BU25A/A46G/C74U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainCrystal structure of the AU25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurineX-ray diffraction1.62013-02-27
134FEP|1|BA24U/U25A/A46G/C74U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainCrystal structure of the A24U/U25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurineX-ray diffraction1.652013-02-27
142EEW|1|AGuanine riboswitchGuanine Riboswitch U47C mutant bound to hypoxanthineX-ray diffraction2.252007-11-13
152EES|1|AGuanine riboswitchGuanine riboswitch A21U, U75A mutant bound to hypoxanthineX-ray diffraction1.752007-11-13
162EEU|1|AGuanine riboswitchGuanine riboswitch U22A, A52U mutant bound to hypoxanthineX-ray diffraction1.952007-11-13
173GES|1|AGuanine riboswitchCrystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanineX-ray diffraction2.152009-06-23
183DS7|1|A67-MERStructure of an RNA-2'-deoxyguanosine complexX-ray diffraction1.852009-02-17
194FEJ|1|BA24U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainCrystal structure of the A24U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-ray diffraction1.52013-02-27
205C7U|1|BPurine riboswitch5'-monophosphate wt guanine riboswitchBacillus subtilisBacteriaRF001675'-monophosphate wt Guanine Riboswitch bound to hypoxanthine.X-ray diffraction3.052015-08-12
213DS7|1|B67-MERStructure of an RNA-2'-deoxyguanosine complexX-ray diffraction1.852009-02-17
224FEL|1|BU25A/A46G mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domainCrystal structure of the U25A/A46G mutant of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-ray diffraction1.62013-02-27
232XO0|1|APurine riboswitchGUANINE RIBOSWITCHBacillus subtilisBacteriaRF00167xpt-pbuX C74U Riboswitch from B. subtilis bound to 24-diamino-1,3,5- triazine identified by virtual screeningX-ray diffraction1.72011-04-06
242XNW|1|APurine riboswitchGUANINE RIBOSWITCHBacillus subtilisBacteriaRF00167XPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO A TRIAZOLO- TRIAZOLE-DIAMINE LIGAND IDENTIFIED BY VIRTUAL SCREENINGX-ray diffraction1.52011-04-06
252XO1|1|APurine riboswitchGuanine riboswitchBacillus subtilisBacteriaRF00167xpt-pbuX C74U Riboswitch from B. subtilis bound to N6-methyladenineX-ray diffraction1.62011-04-06
263GOT|1|AGuanine riboswitchGuanine riboswitch C74U mutant bound to 2-fluoroadenine.X-ray diffraction1.952009-06-23
273G4M|1|AGuanine riboswitchCrystal structure of guanine riboswitch bound to 2-aminopurineX-ray diffraction2.42009-06-23
282B57|1|A65-MERGuanine Riboswitch C74U mutant bound to 2,6-diaminopurineX-ray diffraction2.152006-05-23
295C7W|1|C5'-monophosphate Z:P guanine riboswitchsynthetic construct5'-monophosphate Z:P Guanine Riboswitch bound to hypoxanthine.X-ray diffraction3.222015-08-12

Release history

Release2.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.922.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.158
Date2015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-092016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-08

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15C7W|1|C5'-monophosphate Z:P Guanine Riboswitch bound to hypoxanthine.X-RAY DIFFRACTION3.2265
25C7U|1|B5'-monophosphate wt Guanine Riboswitch bound to hypoxanthine.X-RAY DIFFRACTION3.0567
34FEO|1|BCrystal structure of the AU25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurineX-RAY DIFFRACTION1.667
44FEN|1|BCrystal structure of the A24U/U25A/A46G mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-RAY DIFFRACTION1.3567
54FEP|1|BCrystal structure of the A24U/U25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurineX-RAY DIFFRACTION1.6567
64FEL|1|BCrystal structure of the U25A/A46G mutant of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-RAY DIFFRACTION1.667
73G4M|1|ACrystal structure of guanine riboswitch bound to 2-aminopurineX-RAY DIFFRACTION2.467
82B57|1|AGuanine Riboswitch C74U mutant bound to 2,6-diaminopurineX-RAY DIFFRACTION2.1565
93GOT|1|AGuanine riboswitch C74U mutant bound to 2-fluoroadenine.X-RAY DIFFRACTION1.9567
104FEJ|1|BCrystal structure of the A24U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-RAY DIFFRACTION1.567
113FO4|1|ACrystal structure of guanine riboswitch C74U mutant bound to 6-chloroguanineX-RAY DIFFRACTION1.963
123GER|1|AGuanine riboswitch bound to 6-chloroguanineX-RAY DIFFRACTION1.767
132G9C|1|AModified pyrimidines Specifically bind the purine riboswitchX-RAY DIFFRACTION1.767
142XNZ|1|Axpt-pbuX C74U Riboswitch from B. subtilis bound to acetoguanamine identified by virtual screeningX-RAY DIFFRACTION1.5965
154FE5|1|BCrystal structure of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthineX-RAY DIFFRACTION1.3267
162XO1|1|Axpt-pbuX C74U Riboswitch from B. subtilis bound to N6-methyladenineX-RAY DIFFRACTION1.665
172EES|1|AGuanine riboswitch A21U, U75A mutant bound to hypoxanthineX-RAY DIFFRACTION1.7567
182EET|1|AGuanine Riboswitch A21G, U75C mutant bound to hypoxanthineX-RAY DIFFRACTION1.9567
193GOG|1|AGuanine riboswitch A21G,U75C mutant bound to 6-chloroguanineX-RAY DIFFRACTION2.165
203FO6|1|ACrystal structure of guanine riboswitch bound to 6-O-methylguanineX-RAY DIFFRACTION1.967
212EEW|1|AGuanine Riboswitch U47C mutant bound to hypoxanthineX-RAY DIFFRACTION2.2567
223GES|1|ACrystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanineX-RAY DIFFRACTION2.1567
232XO0|1|Axpt-pbuX C74U Riboswitch from B. subtilis bound to 24-diamino-1,3,5- triazine identified by virtual screeningX-RAY DIFFRACTION1.765
243GAO|1|ACrystal structure of the guanine riboswitch bound to xanthine.X-RAY DIFFRACTION1.967
252EEU|1|AGuanine riboswitch U22A, A52U mutant bound to hypoxanthineX-RAY DIFFRACTION1.9567
262XNW|1|AXPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO A TRIAZOLO- TRIAZOLE-DIAMINE LIGAND IDENTIFIED BY VIRTUAL SCREENINGX-RAY DIFFRACTION1.565
272EEV|1|AGuanine riboswitch U22C, A52G mutant bound to hypoxanthineX-RAY DIFFRACTION1.9567
283DS7|1|AStructure of an RNA-2'-deoxyguanosine complexX-RAY DIFFRACTION1.8567
293DS7|1|BStructure of an RNA-2'-deoxyguanosine complexX-RAY DIFFRACTION1.8567

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0847 s