#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14U3L|1|A+ 4U3L|1|B (rep)RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')synthetic constructoctameric RNA duplex co-crystallized in calcium(II)chlorideX-ray diffraction1.482015-07-29
24U3R|1|A+ 4U3R|1|BRNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')synthetic constructOctameric RNA duplex co-crystallized with cobalt(II)chlorideX-ray diffraction1.72015-07-29
34U47|1|A+ 4U47|1|BRNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')synthetic constructOctameric RNA duplex soaked in terbium(III)chlorideX-ray diffraction1.952015-08-05
44U3O|1|A+ 4U3O|1|BRNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')synthetic constructOctameric RNA duplex soaked in manganese(II)chlorideX-ray diffraction1.82015-07-29
54U3P|1|A+ 4U3P|1|BRNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')synthetic constructOctameric RNA duplex co-crystallized with strontium(II)chlorideX-ray diffraction1.872015-07-29

Release history

Release2.352.362.37
Date2015-08-072015-08-142015-08-21

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_04974.2NR_all_04974.12.35(4) 4U3L|1|A+4U3L|1|B, 4U3O|1|A+4U3O|1|B, 4U3P|1|A+4U3P|1|B, 4U3R|1|A+4U3R|1|B(1) 4U47|1|A+4U47|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14U3O|1|A+ 4U3O|1|BOctameric RNA duplex soaked in manganese(II)chlorideX-RAY DIFFRACTION1.88
24U47|1|A+ 4U47|1|BOctameric RNA duplex soaked in terbium(III)chlorideX-RAY DIFFRACTION1.958
34U3P|1|A+ 4U3P|1|BOctameric RNA duplex co-crystallized with strontium(II)chlorideX-RAY DIFFRACTION1.878
44U3L|1|A+ 4U3L|1|Boctameric RNA duplex co-crystallized in calcium(II)chlorideX-RAY DIFFRACTION1.488
54U3R|1|A+ 4U3R|1|BOctameric RNA duplex co-crystallized with cobalt(II)chlorideX-RAY DIFFRACTION1.78

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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