#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13NMU|1|D+ 3NMU|1|I (rep)RNA (34-MER), RNA (5'-R(*GP*AP*GP*CP*UP*UP*CP*AP*AP*CP*GP*GP*C)-3')Pyrococcus furiosusCrystal Structure of substrate-bound halfmer box C/D RNPX-ray diffraction2.732011-05-25
23NMU|1|E+ 3NMU|1|KRNA (34-MER), RNA (5'-R(*GP*AP*GP*CP*UP*UP*CP*AP*AP*CP*GP*GP*C)-3')Pyrococcus furiosusCrystal Structure of substrate-bound halfmer box C/D RNPX-ray diffraction2.732011-05-25
33NVK|1|K+ 3NVK|1|GRNA (5'-R(*GP*AP*GP*CP*UP*UP*CP*AP*AP*CP*GP*GP*C)-3'), RNA (5'-R(*GP*CP*CP*GP*UP*UP*GP*AP*AP*GP*CP*UP*CP*UP*GP*AP*CP*CP*GP*AP*AP*AP*GP*GP*CP*GP*UP*GP*AP*UP*GP*AP*GP*C)-3')Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particleX-ray diffraction3.212011-07-20
43NVK|1|L+ 3NVK|1|SRNA (5'-R(*GP*AP*GP*CP*UP*UP*CP*AP*AP*CP*GP*GP*C)-3'), RNA (5'-R(*GP*CP*CP*GP*UP*UP*GP*AP*AP*GP*CP*UP*CP*UP*GP*AP*CP*CP*GP*AP*AP*AP*GP*GP*CP*GP*UP*GP*AP*UP*GP*AP*GP*C)-3')Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particleX-ray diffraction3.212011-07-20

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.92
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_09932.1NR_4.0_15188.12.93(2) 3NVK|1|K+3NVK|1|G, 3NVK|1|L+3NVK|1|S(2) 3NMU|1|D+3NMU|1|I, 3NMU|1|E+3NMU|1|K(0)
NR_4.0_09932.1NR_4.0_46231.12.93(2) 3NMU|1|D+3NMU|1|I, 3NMU|1|E+3NMU|1|K(2) 3NVK|1|K+3NVK|1|G, 3NVK|1|L+3NVK|1|S(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
13NVK|1|L+ 3NVK|1|SStructural basis for substrate placement by an archaeal box C/D ribonucleoprotein particleX-RAY DIFFRACTION3.2124
23NMU|1|D+ 3NMU|1|ICrystal Structure of substrate-bound halfmer box C/D RNPX-RAY DIFFRACTION2.7334
33NMU|1|E+ 3NMU|1|KCrystal Structure of substrate-bound halfmer box C/D RNPX-RAY DIFFRACTION2.7334
43NVK|1|K+ 3NVK|1|GStructural basis for substrate placement by an archaeal box C/D ribonucleoprotein particleX-RAY DIFFRACTION3.2124

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0413 s