#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15FLX|1|z (rep)Internal ribosome entry siteHCV-IRESHepacivirus CVirusesRF00061Mammalian 40S HCV-IRES complexElectron microscopy3.92015-12-23
25A2Q|1|3Internal ribosome entry siteHCV IRESHepacivirus CVirusesRF00061Structure of the HCV IRES bound to the human ribosomeElectron microscopy3.92015-07-15
37SYW|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)Electron microscopy3.72022-07-13
47SYX|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)Electron microscopy3.72022-07-13
57SYN|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII)Electron microscopy42022-07-13

Release history

Release3.239
Date2022-07-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_12406.1NR_4.0_58054.13.239(2) 5A2Q|1|3, 5FLX|1|z(3) 7SYN|1|z, 7SYW|1|z, 7SYX|1|z(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_12406.1NR_4.0_12406.23.240(5) 5A2Q|1|3, 5FLX|1|z, 7SYN|1|z, 7SYW|1|z, 7SYX|1|z(0) (1) 7SYV|1|z

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17SYW|1|zStructure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)ELECTRON MICROSCOPY3.7188
27SYX|1|zStructure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)ELECTRON MICROSCOPY3.7188
37SYN|1|zStructure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII)ELECTRON MICROSCOPY4162
45A2Q|1|3Structure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.9257
55FLX|1|zMammalian 40S HCV-IRES complexELECTRON MICROSCOPY3.9264

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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