#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15TBW|1|AS (rep)5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
25TBW|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
34V88|1|A35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
44V88|1|A75S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
57OSA|1|AB5S ribosomal RNA5SSaccharomyces cerevisiaeEukaryaRF00001Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
65I4L|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
76HHQ|1|AS5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of compound C45 bound to the yeast 80S ribosomeX-ray diffraction3.12019-02-20
85MEI|1|AS5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
95MEI|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
105OBM|1|75S ribosomal RNA5S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
116HHQ|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of compound C45 bound to the yeast 80S ribosomeX-ray diffraction3.12019-02-20
125LYB|1|75S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
135ON6|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
145I4L|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
155ON6|1|AS5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
165LYB|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
175OBM|1|35S ribosomal RNA5S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
185NDW|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
197OSM|1|AB5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
205NDW|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
215NDV|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
225NDV|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
235NDG|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
245NDG|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
255TGM|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
265TGM|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
274V7R|1|B25S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome.X-ray diffraction42014-07-09
284V7R|1|D25S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome.X-ray diffraction42014-07-09
295DAT|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
305DGV|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
315DGF|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
325DAT|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
335DGE|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
345DGV|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
355TGA|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
365DC3|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
375DGE|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
385DC3|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
395TGA|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
405DGF|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
417UOO|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae BY4741EukaryaRF00001Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation stateElectron microscopy2.342023-03-15
427V08|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae BY4741EukaryaRF00001Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strainElectron microscopy2.362023-03-15
437ZW0|1|LC5S ribosomal RNA5S ribosomal RNA (RDN5-1)Saccharomyces cerevisiae W303EukaryaRF00001FAP-80S Complex - Rotated stateElectron microscopy2.42022-10-05
448AGX|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state with the RING domain of Ltn1 in the IN positionElectron microscopy2.42023-03-08
457TOP|1|A5S5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.42022-05-25
467UQB|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae BY4741EukaryaRF00001Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4Electron microscopy2.432023-03-15
477UQZ|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae BY4741EukaryaRF00001Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strainElectron microscopy2.442023-03-15
487ZUX|1|45S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Collided ribosome in a disome unit from S. cerevisiaeElectron microscopy2.52023-02-22
498AAF|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state GElectron microscopy2.52023-03-08
506T4Q|1|C45S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.Electron microscopy2.62019-12-25
518AGW|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state DElectron microscopy2.62023-03-08
528AGT|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state FElectron microscopy2.62023-03-08
538AGV|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state HElectron microscopy2.62023-03-08
548AGZ|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state with the RING domain of Ltn1 in the OUT positionElectron microscopy2.62023-03-08
558AGU|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state EElectron microscopy2.72023-03-08
567TOO|1|A5S5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.72022-05-25
577MPJ|1|A35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Stm1 bound vacant 80S structure isolated from nop1-D243AElectron microscopy2.72022-05-11
586TB3|1|BR5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexElectron microscopy2.82020-04-22
596SNT|1|45S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome stalled on SDD1 mRNA.Electron microscopy2.82020-03-04
607AZY|1|F5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiae S288CEukaryaRF00001Context-specific inhibition of eukaryotic translation by macrolide antibioticsElectron microscopy2.8772021-05-19
614U4R|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
624U3U|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
636WOO|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDPElectron microscopy2.92020-09-23
647UG6|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae S288CEukaryaRF00001Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922Electron microscopy2.92022-12-21
654U4R|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
664U3U|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
677N8B|1|A35S ribosomal RNA5SSaccharomyces cerevisiaeEukaryaRF00001Cycloheximide bound vacant 80S structure isolated from cbf5-D95AElectron microscopy3.052022-05-11
687MPI|1|A35S ribosomal RNA5s rRNASaccharomyces cerevisiaeEukaryaRF00001Stm1 bound vacant 80S structure isolated from cbf5-D95AElectron microscopy3.052022-05-11
694U4Q|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
704U4Q|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
714U3M|1|75S ribosomal RNA5.8s rRNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
724U52|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
734U3M|1|35S ribosomal RNA5.8s rRNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
748BIP|1|C45S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complexElectron microscopy3.12023-02-08
756QIK|1|x5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.12019-06-26
767OHQ|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae S288CEukaryaRF00001Nog1-TAP associated immature ribosomal particle population C from S. cerevisiaeElectron microscopy3.12021-11-03
774U4U|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
787BT6|1|35S ribosomal RNARDN5-2 rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)Electron microscopy3.122020-10-28
796Q8Y|1|BR5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexElectron microscopy3.12019-03-13
806YLG|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)Electron microscopy32020-07-29
814U6F|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
825T62|1|B5S ribosomal RNA5S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 ComplexElectron microscopy3.12017-02-08
834U52|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
844U4U|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
856T7T|1|C45S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of yeast 80S ribosome stalled on poly(A) tract.Electron microscopy3.12019-12-25
866XIR|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative StressElectron microscopy3.22020-08-26
876RZZ|1|x5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.22019-06-26
887ZS5|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNAElectron microscopy3.22023-02-22
896M62|1|35S ribosomal RNARDN5-2 rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.Electron microscopy3.22020-08-26
907BTB|1|35S ribosomal RNARDN5-2 rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)Electron microscopy3.222020-10-28
917RR5|1|C45S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of ribosomal complex bound with Rbg1/Tma46Electron microscopy3.232021-11-10
926YLH|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Rix1-Rea1 pre-60S particle - full composite structureElectron microscopy3.12020-07-29
934U4N|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
944U6F|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
956TNU|1|BR5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.Electron microscopy3.12020-04-22
963JCT|1|35S ribosomal RNARDN5-2 rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-em structure of eukaryotic pre-60S ribosomal subunitsElectron microscopy3.082016-06-01
974U3N|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
984U4Z|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
994U4N|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
1006T7I|1|C45S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.Electron microscopy3.22019-12-25
1017B7D|1|LB5S ribosomal RNA5S rRNASaccharomyces cerevisiae S288CEukaryaRF00001Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsElectron microscopy3.32021-03-10
1026RI5|1|x5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.32019-06-26
1036S47|1|AB5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1Electron microscopy3.282019-07-24
1044U4Z|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
1054U55|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1064U50|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1075M1J|1|345S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Nonstop ribosomal complex bound with Dom34 and Hbs1Electron microscopy3.32017-01-18
1084U50|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1094U3N|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1104U4Y|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1114U4Y|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1124U51|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1136Z6K|1|C45S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomesElectron microscopy3.42020-07-29
1146Z6J|1|C45S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native conditionElectron microscopy3.42020-07-29
1156QT0|1|x5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.42019-06-26
1167OH3|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae S288CEukaryaRF00001Nog1-TAP associated immature ribosomal particle population B from S. cerevisiaeElectron microscopy3.42021-11-03
1174U55|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1185H4P|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1Electron microscopy3.072017-01-25
1196SV4|1|YR5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1206SV4|1|ZR5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1214U53|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
1227ZPQ|1|45S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)Electron microscopy3.472023-02-22
1235APO|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1Electron microscopy3.412015-12-16
1246QTZ|1|x5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.52019-06-26
1256R86|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Yeast Vms1-60S ribosomal subunit complex (post-state)Electron microscopy3.42019-07-31
1266N8M|1|B5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1274U51|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1284U53|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
1296SV4|1|BR5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1306N8O|1|B5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1316N8J|1|25S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1326R87|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)Electron microscopy3.42019-06-26
1336HD7|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of the ribosome-NatA complexElectron microscopy3.42018-12-19
1345JUP|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)Electron microscopy3.52016-10-05
1356N8K|1|25S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunitElectron microscopy3.62019-03-13
1366N8L|1|25S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunitElectron microscopy3.62019-03-13
1374U56|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
1386R84|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)Electron microscopy3.62019-06-26
1394U56|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
1408BJQ|1|C45S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complexElectron microscopy3.82023-02-08
1416OIG|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Subunit joining exposes nascent pre-40S rRNA for processing and quality controlElectron microscopy3.82020-09-30
1427Z34|1|25S ribosomal RNA5S rRNASaccharomyces cerevisiae S288CEukaryaRF00001Structure of pre-60S particle bound to DRG1(AFG2)Electron microscopy3.82022-09-21
1436N8N|1|B5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunitElectron microscopy3.82019-03-13
1446S05|1|x5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.92019-06-26
1457NRC|1|LB5S ribosomal RNA5S rRNA (121-MER)Saccharomyces cerevisiae S288CEukaryaRF00001Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5AElectron microscopy3.92021-05-05
1466GQB|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)Electron microscopy3.92018-07-11
1475MC6|1|BR5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiaeElectron microscopy3.82017-01-18
1486T83|1|Bb5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of yeast disome (di-ribosome) stalled on poly(A) tract.Electron microscopy42019-12-25
1496T83|1|4b5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of yeast disome (di-ribosome) stalled on poly(A) tract.Electron microscopy42019-12-25
1505JUT|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)Electron microscopy42016-10-05
1516FT6|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactorsElectron microscopy3.92018-03-28
1525JUO|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)Electron microscopy42016-10-05
1535JUU|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)Electron microscopy42016-10-05
1546GQV|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)Electron microscopy42018-07-11
1555APN|1|75S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1Electron microscopy3.912015-12-16
1564U4O|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Geneticin bound to the yeast 80S ribosomeX-ray diffraction3.62014-10-22
1574U4O|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Geneticin bound to the yeast 80S ribosomeX-ray diffraction3.62014-10-22
1585GAK|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AElectron microscopy3.882016-02-24
1597OF1|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae S288CEukaryaRF00001Nog1-TAP associated immature ribosomal particle population A from S. cerevisiaeElectron microscopy3.12021-11-03

Release history

Release3.274
Date2023-03-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_18586.54NR_4.0_18586.533.274(155) 3JCT|1|3, 4U3M|1|3, 4U3M|1|7, 4U3N|1|3, 4U3N|1|7, 4U3U|1|3, 4U3U|1|7, 4U4N|1|3, 4U4N|1|7, 4U4O|1|3, 4U4O|1|7, 4U4Q|1|3, 4U4Q|1|7, 4U4R|1|3, 4U4R|1|7, 4U4U|1|3, 4U4U|1|7, 4U4Y|1|3, 4U4Y|1|7, 4U4Z|1|3, 4U4Z|1|7, 4U50|1|3, 4U50|1|7, 4U51|1|3, 4U51|1|7, 4U52|1|3, 4U52|1|7, 4U53|1|3, 4U53|1|7, 4U55|1|3, 4U55|1|7, 4U56|1|3, 4U56|1|7, 4U6F|1|3, 4U6F|1|7, 4V7R|1|B2, 4V7R|1|D2, 4V88|1|A3, 4V88|1|A7, 5APN|1|7, 5APO|1|7, 5DAT|1|3, 5DAT|1|7, 5DC3|1|3, 5DC3|1|7, 5DGE|1|3, 5DGE|1|7, 5DGF|1|3, 5DGF|1|7, 5DGV|1|3, 5DGV|1|7, 5GAK|1|3, 5H4P|1|3, 5I4L|1|3, 5I4L|1|7, 5JUO|1|D, 5JUP|1|D, 5JUT|1|D, 5JUU|1|D, 5LYB|1|3, 5LYB|1|7, 5M1J|1|34, 5MC6|1|BR, 5MEI|1|3, 5MEI|1|AS, 5NDG|1|3, 5NDG|1|7, 5NDV|1|3, 5NDV|1|7, 5NDW|1|3, 5NDW|1|7, 5OBM|1|3, 5OBM|1|7, 5ON6|1|3, 5ON6|1|AS, 5T62|1|B, 5TBW|1|3, 5TBW|1|AS, 5TGA|1|3, 5TGA|1|7, 5TGM|1|3, 5TGM|1|7, 6FT6|1|3, 6GQB|1|3, 6GQV|1|3, 6HD7|1|3, 6HHQ|1|3, 6HHQ|1|AS, 6M62|1|3, 6N8J|1|2, 6N8K|1|2, 6N8L|1|2, 6N8M|1|B, 6N8N|1|B, 6N8O|1|B, 6OIG|1|7, 6Q8Y|1|BR, 6QIK|1|x, 6QT0|1|x, 6QTZ|1|x, 6R84|1|3, 6R86|1|3, 6R87|1|3, 6RI5|1|x, 6RZZ|1|x, 6S05|1|x, 6S47|1|AB, 6SNT|1|4, 6SV4|1|BR, 6SV4|1|YR, 6SV4|1|ZR, 6T4Q|1|C4, 6T7I|1|C4, 6T7T|1|C4, 6T83|1|4b, 6T83|1|Bb, 6TB3|1|BR, 6TNU|1|BR, 6WOO|1|7, 6XIR|1|3, 6YLG|1|3, 6YLH|1|3, 6Z6J|1|C4, 6Z6K|1|C4, 7AZY|1|F, 7B7D|1|LB, 7BT6|1|3, 7BTB|1|3, 7MPI|1|A3, 7MPJ|1|A3, 7N8B|1|A3, 7NRC|1|LB, 7OF1|1|3, 7OH3|1|3, 7OHQ|1|3, 7OSA|1|AB, 7OSM|1|AB, 7RR5|1|C4, 7TOO|1|A5S, 7TOP|1|A5S, 7UG6|1|3, 7Z34|1|2, 7ZPQ|1|4, 7ZS5|1|3, 7ZUX|1|4, 7ZW0|1|LC, 8AAF|1|h, 8AGT|1|h, 8AGU|1|h, 8AGV|1|h, 8AGW|1|h, 8AGX|1|h, 8AGZ|1|h, 8BIP|1|C4, 8BJQ|1|C4(4) 7UOO|1|3, 7UQB|1|3, 7UQZ|1|3, 7V08|1|3(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_18586.54NR_4.0_18586.553.275(159) 3JCT|1|3, 4U3M|1|3, 4U3M|1|7, 4U3N|1|3, 4U3N|1|7, 4U3U|1|3, 4U3U|1|7, 4U4N|1|3, 4U4N|1|7, 4U4O|1|3, 4U4O|1|7, 4U4Q|1|3, 4U4Q|1|7, 4U4R|1|3, 4U4R|1|7, 4U4U|1|3, 4U4U|1|7, 4U4Y|1|3, 4U4Y|1|7, 4U4Z|1|3, 4U4Z|1|7, 4U50|1|3, 4U50|1|7, 4U51|1|3, 4U51|1|7, 4U52|1|3, 4U52|1|7, 4U53|1|3, 4U53|1|7, 4U55|1|3, 4U55|1|7, 4U56|1|3, 4U56|1|7, 4U6F|1|3, 4U6F|1|7, 4V7R|1|B2, 4V7R|1|D2, 4V88|1|A3, 4V88|1|A7, 5APN|1|7, 5APO|1|7, 5DAT|1|3, 5DAT|1|7, 5DC3|1|3, 5DC3|1|7, 5DGE|1|3, 5DGE|1|7, 5DGF|1|3, 5DGF|1|7, 5DGV|1|3, 5DGV|1|7, 5GAK|1|3, 5H4P|1|3, 5I4L|1|3, 5I4L|1|7, 5JUO|1|D, 5JUP|1|D, 5JUT|1|D, 5JUU|1|D, 5LYB|1|3, 5LYB|1|7, 5M1J|1|34, 5MC6|1|BR, 5MEI|1|3, 5MEI|1|AS, 5NDG|1|3, 5NDG|1|7, 5NDV|1|3, 5NDV|1|7, 5NDW|1|3, 5NDW|1|7, 5OBM|1|3, 5OBM|1|7, 5ON6|1|3, 5ON6|1|AS, 5T62|1|B, 5TBW|1|3, 5TBW|1|AS, 5TGA|1|3, 5TGA|1|7, 5TGM|1|3, 5TGM|1|7, 6FT6|1|3, 6GQB|1|3, 6GQV|1|3, 6HD7|1|3, 6HHQ|1|3, 6HHQ|1|AS, 6M62|1|3, 6N8J|1|2, 6N8K|1|2, 6N8L|1|2, 6N8M|1|B, 6N8N|1|B, 6N8O|1|B, 6OIG|1|7, 6Q8Y|1|BR, 6QIK|1|x, 6QT0|1|x, 6QTZ|1|x, 6R84|1|3, 6R86|1|3, 6R87|1|3, 6RI5|1|x, 6RZZ|1|x, 6S05|1|x, 6S47|1|AB, 6SNT|1|4, 6SV4|1|BR, 6SV4|1|YR, 6SV4|1|ZR, 6T4Q|1|C4, 6T7I|1|C4, 6T7T|1|C4, 6T83|1|4b, 6T83|1|Bb, 6TB3|1|BR, 6TNU|1|BR, 6WOO|1|7, 6XIR|1|3, 6YLG|1|3, 6YLH|1|3, 6Z6J|1|C4, 6Z6K|1|C4, 7AZY|1|F, 7B7D|1|LB, 7BT6|1|3, 7BTB|1|3, 7MPI|1|A3, 7MPJ|1|A3, 7N8B|1|A3, 7NRC|1|LB, 7OF1|1|3, 7OH3|1|3, 7OHQ|1|3, 7OSA|1|AB, 7OSM|1|AB, 7RR5|1|C4, 7TOO|1|A5S, 7TOP|1|A5S, 7UG6|1|3, 7UOO|1|3, 7UQB|1|3, 7UQZ|1|3, 7V08|1|3, 7Z34|1|2, 7ZPQ|1|4, 7ZS5|1|3, 7ZUX|1|4, 7ZW0|1|LC, 8AAF|1|h, 8AGT|1|h, 8AGU|1|h, 8AGV|1|h, 8AGW|1|h, 8AGX|1|h, 8AGZ|1|h, 8BIP|1|C4, 8BJQ|1|C4(0) (2) 8BQD|1|BR, 8BQX|1|BR

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14V7R|1|D2Yeast 80S ribosome.X-RAY DIFFRACTION4121
24V7R|1|B2Yeast 80S ribosome.X-RAY DIFFRACTION4121
37OF1|1|3Nog1-TAP associated immature ribosomal particle population A from S. cerevisiaeELECTRON MICROSCOPY3.143
47Z34|1|2Structure of pre-60S particle bound to DRG1(AFG2)ELECTRON MICROSCOPY3.8121
56YLG|1|3Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)ELECTRON MICROSCOPY3117
66YLH|1|3Rix1-Rea1 pre-60S particle - full composite structureELECTRON MICROSCOPY3.1117
76OIG|1|7Subunit joining exposes nascent pre-40S rRNA for processing and quality controlELECTRON MICROSCOPY3.8121
87ZS5|1|3Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNAELECTRON MICROSCOPY3.2121
96HD7|1|3Cryo-EM structure of the ribosome-NatA complexELECTRON MICROSCOPY3.4121
105GAK|1|3Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AELECTRON MICROSCOPY3.88121
115JUO|1|DSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)ELECTRON MICROSCOPY4121
125JUT|1|DSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)ELECTRON MICROSCOPY4121
135JUU|1|DSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)ELECTRON MICROSCOPY4121
145JUP|1|DSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)ELECTRON MICROSCOPY3.5121
155MC6|1|BRCryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiaeELECTRON MICROSCOPY3.8121
166R86|1|3Yeast Vms1-60S ribosomal subunit complex (post-state)ELECTRON MICROSCOPY3.4121
176R84|1|3Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)ELECTRON MICROSCOPY3.6121
186R87|1|3Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)ELECTRON MICROSCOPY3.4121
196QTZ|1|xCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.5121
206RI5|1|xCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.3121
217RR5|1|C4Structure of ribosomal complex bound with Rbg1/Tma46ELECTRON MICROSCOPY3.23121
227B7D|1|LBYeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsELECTRON MICROSCOPY3.3121
237NRC|1|LBStructure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5AELECTRON MICROSCOPY3.9121
246TNU|1|BRYeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.ELECTRON MICROSCOPY3.1121
256T83|1|4bStructure of yeast disome (di-ribosome) stalled on poly(A) tract.ELECTRON MICROSCOPY4121
266T83|1|BbStructure of yeast disome (di-ribosome) stalled on poly(A) tract.ELECTRON MICROSCOPY4121
276SV4|1|BRThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.3121
286SV4|1|ZRThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.3121
296SV4|1|YRThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.3121
307ZUX|1|4Collided ribosome in a disome unit from S. cerevisiaeELECTRON MICROSCOPY2.5121
317TOO|1|A5SYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.7121
327TOP|1|A5SYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.4121
337ZPQ|1|4Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)ELECTRON MICROSCOPY3.47121
348BJQ|1|C4Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complexELECTRON MICROSCOPY3.8121
358BIP|1|C4Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complexELECTRON MICROSCOPY3.1121
368AGU|1|hYeast RQC complex in state EELECTRON MICROSCOPY2.7121
378AGV|1|hYeast RQC complex in state HELECTRON MICROSCOPY2.6121
388AGT|1|hYeast RQC complex in state FELECTRON MICROSCOPY2.6121
398AGX|1|hYeast RQC complex in state with the RING domain of Ltn1 in the IN positionELECTRON MICROSCOPY2.4121
408AAF|1|hYeast RQC complex in state GELECTRON MICROSCOPY2.5121
418AGZ|1|hYeast RQC complex in state with the RING domain of Ltn1 in the OUT positionELECTRON MICROSCOPY2.6121
428AGW|1|hYeast RQC complex in state DELECTRON MICROSCOPY2.6121
437ZW0|1|LCFAP-80S Complex - Rotated stateELECTRON MICROSCOPY2.4121
445NDW|1|3Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.7121
455NDG|1|3Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.7121
464U56|1|3Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.45121
475ON6|1|3Crystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.1121
485DAT|1|3Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.15121
495MEI|1|3Crystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.5121
504U53|1|3Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.3121
514U50|1|3Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
524U52|1|3Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
534U51|1|3Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
544U55|1|3Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
554U4N|1|3Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
564U4Z|1|3Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
574U6F|1|3Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
584U3N|1|3Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
594V88|1|A3The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION3121
604U4R|1|3Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.8121
614U3U|1|3Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.9121
624U3M|1|3Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
634U4U|1|3Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
644U4Q|1|3Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
656HHQ|1|3Crystal structure of compound C45 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
665TBW|1|3Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
674U4Y|1|3Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
685I4L|1|3Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
695TGA|1|3Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.3121
705LYB|1|3Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.25121
715DGV|1|3Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.1121
725DC3|1|3Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.25121
735DGE|1|3Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.45121
745DGF|1|3Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.3121
755TGM|1|3Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.5121
764U4O|1|3Crystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.6121
775NDV|1|3Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.3121
786T7I|1|C4Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.ELECTRON MICROSCOPY3.2121
796T7T|1|C4Structure of yeast 80S ribosome stalled on poly(A) tract.ELECTRON MICROSCOPY3.1121
806SNT|1|4Yeast 80S ribosome stalled on SDD1 mRNA.ELECTRON MICROSCOPY2.8121
816T4Q|1|C4Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.ELECTRON MICROSCOPY2.6121
826TB3|1|BRyeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexELECTRON MICROSCOPY2.8121
836S47|1|ABSaccharomyces cerevisiae 80S ribosome bound with ABCF protein New1ELECTRON MICROSCOPY3.28121
846Z6K|1|C4Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomesELECTRON MICROSCOPY3.4121
856Z6J|1|C4Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native conditionELECTRON MICROSCOPY3.4121
866Q8Y|1|BRCryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexELECTRON MICROSCOPY3.1121
877AZY|1|FContext-specific inhibition of eukaryotic translation by macrolide antibioticsELECTRON MICROSCOPY2.877121
887MPI|1|A3Stm1 bound vacant 80S structure isolated from cbf5-D95AELECTRON MICROSCOPY3.05121
897N8B|1|A3Cycloheximide bound vacant 80S structure isolated from cbf5-D95AELECTRON MICROSCOPY3.05121
907MPJ|1|A3Stm1 bound vacant 80S structure isolated from nop1-D243AELECTRON MICROSCOPY2.7120
916WOO|1|7CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDPELECTRON MICROSCOPY2.9121
925APN|1|7Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1ELECTRON MICROSCOPY3.91121
935APO|1|7Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1ELECTRON MICROSCOPY3.41121
945NDW|1|7Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.7121
955NDG|1|7Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.7121
964U56|1|7Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.45121
975TGA|1|7Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.3121
985LYB|1|7Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.25121
995I4L|1|7Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
1004U3N|1|7Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
1014U4Z|1|7Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
1024U55|1|7Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
1034U4Y|1|7Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
1044U3M|1|7Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
1054U4R|1|7Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.8121
1064U3U|1|7Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.9121
1074V88|1|A7The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION3121
1084U4Q|1|7Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
1094U4U|1|7Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
1104U4N|1|7Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
1114U53|1|7Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.3121
1124U51|1|7Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
1134U50|1|7Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
1144U52|1|7Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
1155DAT|1|7Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.15121
1165DGF|1|7Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.3121
1174U6F|1|7Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
1185DGV|1|7Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.1121
1195DC3|1|7Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.25121
1205DGE|1|7Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.45121
1215TGM|1|7Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.5121
1224U4O|1|7Crystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.6121
1235MEI|1|ASCrystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.5121
1245ON6|1|ASCrystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.1121
1256HHQ|1|ASCrystal structure of compound C45 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
1265TBW|1|ASCrystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
1275NDV|1|7Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.3121
1287OSA|1|ABPre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION3121
1297OSM|1|ABIntermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION3121
1305M1J|1|34Nonstop ribosomal complex bound with Dom34 and Hbs1ELECTRON MICROSCOPY3.3121
1316XIR|1|3Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative StressELECTRON MICROSCOPY3.2121
1326QT0|1|xCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.4121
1335OBM|1|7Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.4121
1345OBM|1|3Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.4121
1356RZZ|1|xCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.2121
1366QIK|1|xCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.1121
1376S05|1|xCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.9121
1385H4P|1|3Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1ELECTRON MICROSCOPY3.07121
1396N8J|1|2Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunitELECTRON MICROSCOPY3.5121
1406GQV|1|3Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)ELECTRON MICROSCOPY4121
1416GQB|1|3Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)ELECTRON MICROSCOPY3.9121
1426N8L|1|2Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunitELECTRON MICROSCOPY3.6121
1436N8K|1|2Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunitELECTRON MICROSCOPY3.6121
1446N8N|1|BCryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunitELECTRON MICROSCOPY3.8121
1456N8M|1|BCryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunitELECTRON MICROSCOPY3.5121
1465T62|1|BNmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 ComplexELECTRON MICROSCOPY3.1121
1476N8O|1|BCryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunitELECTRON MICROSCOPY3.5121
1483JCT|1|3Cryo-em structure of eukaryotic pre-60S ribosomal subunitsELECTRON MICROSCOPY3.08121
1497BTB|1|3Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)ELECTRON MICROSCOPY3.22121
1506FT6|1|3Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactorsELECTRON MICROSCOPY3.9121
1517UG6|1|3Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922ELECTRON MICROSCOPY2.9121
1527OHQ|1|3Nog1-TAP associated immature ribosomal particle population C from S. cerevisiaeELECTRON MICROSCOPY3.1121
1537OH3|1|3Nog1-TAP associated immature ribosomal particle population B from S. cerevisiaeELECTRON MICROSCOPY3.4121
1547UQB|1|3Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4ELECTRON MICROSCOPY2.43120
1557V08|1|3Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strainELECTRON MICROSCOPY2.36120
1567UQZ|1|3Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strainELECTRON MICROSCOPY2.44120
1577UOO|1|3Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation stateELECTRON MICROSCOPY2.34120
1587BT6|1|3Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)ELECTRON MICROSCOPY3.12121
1596M62|1|3Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.ELECTRON MICROSCOPY3.2121

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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