NR_4.0_19951.47

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	4YCO\|1\|D (rep)	Transfer RNA	tRNAphe	Escherichia coli	Bacteria	RF00005	E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe	X-ray diffraction	2.1	74	2015-04-22
2	4YCO\|1\|E	Transfer RNA	tRNAphe	Escherichia coli	Bacteria	RF00005	E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe	X-ray diffraction	2.1	67	2015-04-22
3	4YCO\|1\|F	Transfer RNA	tRNAphe	Escherichia coli	Bacteria	RF00005	E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe	X-ray diffraction	2.1	71	2015-04-22
4	3FOZ\|1\|C		tRNA(Phe)				Structure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)	X-ray diffraction	2.5	74	2009-01-20
5	4WOI\|1\|DW	Transfer RNA	Messenger RNA, Phenylalanine specific transfer RNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	76	2015-08-05
6	5NDK\|1\|X1	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	76	2017-12-13
7	4V9H\|1\|AV	Transfer RNA	mRNA, PE hybrid state tRNA Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-ray diffraction	2.86	74	2014-07-09
8	3L0U\|1\|A	Transfer RNA	Unmodified tRNAPhe	Escherichia coli	Bacteria	RF00005	The crystal structure of unmodified tRNAPhe from Escherichia coli	X-ray diffraction	3	73	2010-03-16
9	2ZM5\|1\|C	Transfer RNA	tRNA(Phe)	Escherichia coli	Bacteria	RF00005	Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)	X-ray diffraction	2.55	74	2009-04-14
10	5NDK\|1\|X4	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	76	2017-12-13
11	4V5R\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	76	2014-07-09
12	4V9D\|1\|BV	Transfer RNA	messenger RNA, phenylalanine specific transfer RNA	Escherichia coli	Bacteria	RF00005	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	76	2014-07-09
13	4V5R\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	76	2014-07-09
14	6QNR\|1\|2K	Transfer RNA	E. coli tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-ray diffraction	3.1	76	2019-06-19
15	4V5P\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	76	2014-07-09
16	4V5P\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	76	2014-07-09
17	2ZXU\|1\|C	Transfer RNA	tRNA(Phe)	Escherichia coli	Bacteria	RF00005	Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPP	X-ray diffraction	2.75	74	2009-05-26
18	4V6F\|1\|CC	Transfer RNA	MRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37	Escherichia coli	Bacteria	RF00005	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	76	2014-07-09
19	5NDJ\|1\|X1	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-ray diffraction	3.15	76	2018-05-02
20	6QNR\|1\|2L	Transfer RNA	E. coli tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-ray diffraction	3.1	76	2019-06-19
21	5NDJ\|1\|X4	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-ray diffraction	3.15	76	2018-05-02
22	4WQU\|1\|BW	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	76	2015-01-28
23	4V5S\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	76	2014-07-09
24	4W2E\|1\|w	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	76	2014-10-01
25	4V5Q\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	76	2014-07-09
26	4WQF\|1\|BW	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	76	2015-01-28
27	4V5S\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	76	2014-07-09
28	4V5E\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Insights into translational termination from the structure of RF2 bound to the ribosome	X-ray diffraction	3.45	76	2014-07-09
29	5J4B\|1\|1y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	74	2016-04-27
30	6C5L\|1\|AV	Transfer RNA	E-site tRNA PHE OR P-site tRNA PHE (unmodified bases), mRNA	Escherichia coli	Bacteria	RF00005	Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)	X-ray diffraction	3.2	76	2018-02-21
31	6CFJ\|1\|1w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	74	2018-03-07
32	4V5E\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Insights into translational termination from the structure of RF2 bound to the ribosome	X-ray diffraction	3.45	76	2014-07-09
33	5W4K\|1\|1y	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	74	2017-08-30
34	4V5J\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-ray diffraction	3.1	76	2014-07-09
35	4V5Q\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	76	2014-07-09
36	6XHY\|1\|1w	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-ray diffraction	2.6	74	2020-12-23
37	5WIT\|1\|1w	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	74	2018-02-14
38	6C5L\|1\|CV	Transfer RNA	E-site tRNA PHE OR P-site tRNA PHE (unmodified bases), mRNA	Escherichia coli	Bacteria	RF00005	Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)	X-ray diffraction	3.2	76	2018-02-21
39	6CFJ\|1\|1y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	74	2018-03-07
40	6CFJ\|1\|2w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	72	2018-03-07
41	5J4C\|1\|1w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	74	2016-04-27
42	5WIS\|1\|1y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	74	2018-02-14
43	5J4C\|1\|1y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	74	2016-04-27
44	4V6F\|1\|BC	Transfer RNA	MRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37	Escherichia coli	Bacteria	RF00005	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	76	2014-07-09
45	6Y3G\|1\|F	Transfer RNA	RNA (75-MER)	Escherichia coli	Bacteria	RF00005	Crystal structure of phenylalanine tRNA from Escherichia coli	X-ray diffraction	3.1	75	2020-12-30
46	4WQU\|1\|DW	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	76	2015-01-28
47	4V5D\|1\|CV	Transfer RNA	MRNA, P AND A-SITE PHE-TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	76	2014-07-09
48	6XHW\|1\|1w	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	74	2020-12-23
49	4V5D\|1\|AV	Transfer RNA	MRNA, P AND A-SITE PHE-TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	76	2014-07-09
50	6CFJ\|1\|2y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	73	2018-03-07
51	5WIS\|1\|1w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	74	2018-02-14
52	4WT1\|1\|1K	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-ray diffraction	3.05	76	2015-06-10
53	5J4B\|1\|1w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	74	2016-04-27
54	6XHV\|1\|1w	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	74	2020-12-23
55	5NDK\|1\|W1	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	76	2017-12-13
56	6XHY\|1\|2w	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-ray diffraction	2.6	72	2020-12-23
57	5J4C\|1\|2w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	72	2016-04-27
58	4V51\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	76	2014-07-09
59	4WQF\|1\|DW	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	76	2015-01-28
60	5J4B\|1\|2w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	72	2016-04-27
61	4WT1\|1\|3K	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-ray diffraction	3.05	76	2015-06-10
62	4V5J\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-ray diffraction	3.1	76	2014-07-09
63	4V9C\|1\|AV	Transfer RNA	Messenger RNA, mRNA, Phenylalanine specific transfer RNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	76	2014-07-09
64	5J4B\|1\|2y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	73	2016-04-27
65	5J4C\|1\|2y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	73	2016-04-27
66	5W4K\|1\|1w	Transfer RNA	mRNA, tRNA, A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	74	2017-08-30
67	5NDK\|1\|W4	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	76	2017-12-13
68	6ND5\|1\|1y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	74	2019-03-20
69	4WOI\|1\|AX	Transfer RNA	Messenger RNA, Phenylalanine specific transfer RNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	76	2015-08-05
70	4W2G\|1\|AW	Transfer RNA	A/P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	74	2014-10-15
71	4WQR\|1\|3K	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.15	76	2015-06-10
72	6XHW\|1\|2w	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	72	2020-12-23
73	5WIS\|1\|2y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	73	2018-02-14
74	5WIT\|1\|2w	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	72	2018-02-14
75	6XHV\|1\|2w	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	72	2020-12-23
76	5DOY\|1\|1y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	74	2015-12-30
77	5W4K\|1\|2y	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	73	2017-08-30
78	2ZM5\|1\|D	Transfer RNA	tRNA(Phe)	Escherichia coli	Bacteria	RF00005	Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)	X-ray diffraction	2.55	69	2009-04-14
79	4Y4P\|1\|1y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	74	2015-03-18
80	4V9D\|1\|AV	Transfer RNA	messenger RNA, phenylalanine specific transfer RNA	Escherichia coli	Bacteria	RF00005	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	76	2014-07-09
81	4Z3S\|1\|1y	Transfer RNA	A/E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	74	2015-06-03
82	4WSD\|1\|1K	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	76	2015-06-10
83	5DOY\|1\|1w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	75	2015-12-30
84	4WT1\|1\|3L	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-ray diffraction	3.05	76	2015-06-10
85	4V5S\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	76	2014-07-09
86	5DOY\|1\|2y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	73	2015-12-30
87	4V51\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	76	2014-07-09
88	6ND5\|1\|1w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	74	2019-03-20
89	4W2I\|1\|AW	Transfer RNA	A/P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	74	2014-10-15
90	4WSD\|1\|3L	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	76	2015-06-10
91	4V6F\|1\|BD	Transfer RNA	MRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37	Escherichia coli	Bacteria	RF00005	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	76	2014-07-09
92	4W2I\|1\|CW	Transfer RNA	A/P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	72	2014-10-15
93	4Z3S\|1\|2y	Transfer RNA	A/E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	73	2015-06-03
94	4Z3S\|1\|1w	Transfer RNA	A/E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	74	2015-06-03
95	5W4K\|1\|2w	Transfer RNA	mRNA, tRNA, A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	72	2017-08-30
96	4WQR\|1\|3L	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.15	76	2015-06-10
97	1VY4\|1\|AW	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	74	2014-08-20
98	4V5S\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	76	2014-07-09
99	6ND5\|1\|2y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	73	2019-03-20
100	4WPO\|1\|BY	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	74	2015-01-28
101	4Y4P\|1\|2y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	73	2015-03-18
102	4WRO\|1\|1K	Transfer RNA	RNA (30-MER), tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-ray diffraction	3.05	74	2015-06-10
103	4W2G\|1\|CW	Transfer RNA	A/P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	72	2014-10-15
104	4V5D\|1\|CW	Transfer RNA	E-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	76	2014-07-09
105	6UO1\|1\|2y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	73	2019-11-27
106	4V5L\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog	X-ray diffraction	3.1	76	2014-07-09
107	6UO1\|1\|2w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	69	2019-11-27
108	4WSD\|1\|3K	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	75	2015-06-10
109	4W2I\|1\|AY	Transfer RNA	A/P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	74	2014-10-15
110	4V5D\|1\|AW	Transfer RNA	E-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	76	2014-07-09
111	4W2F\|1\|AW	Transfer RNA	A/P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	74	2014-10-15
112	4Y4P\|1\|1w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	74	2015-03-18
113	5NDJ\|1\|W1	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-ray diffraction	3.15	76	2018-05-02
114	4Z3S\|1\|2w	Transfer RNA	A/E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	73	2015-06-03
115	4WT1\|1\|1L	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-ray diffraction	3.05	76	2015-06-10
116	6UO1\|1\|1y	Transfer RNA	A-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	74	2019-11-27
117	4W2I\|1\|CY	Transfer RNA	A/P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	73	2014-10-15
118	1VY4\|1\|AY	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	74	2014-08-20
119	4V5D\|1\|AY	Transfer RNA	MRNA, P AND A-SITE PHE-TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	76	2014-07-09
120	4V5E\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Insights into translational termination from the structure of RF2 bound to the ribosome	X-ray diffraction	3.45	76	2014-07-09
121	6QNR\|1\|1K	Transfer RNA	E. coli tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-ray diffraction	3.1	76	2019-06-19
122	5NDJ\|1\|W4	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-ray diffraction	3.15	76	2018-05-02
123	4WZO\|1\|3K	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-fMet and mRNA	X-ray diffraction	3.3	76	2015-06-10
124	4WPO\|1\|DY	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	73	2015-01-28
125	4W2G\|1\|AY	Transfer RNA	A/P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	74	2014-10-15
126	4V5J\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-ray diffraction	3.1	76	2014-07-09
127	6XHY\|1\|1y	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-ray diffraction	2.6	74	2020-12-23
128	4V5G\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA	X-ray diffraction	3.6	76	2014-07-09
129	6UO1\|1\|1w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	71	2019-11-27
130	5WIS\|1\|2w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	72	2018-02-14
131	4V5G\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA	X-ray diffraction	3.6	76	2014-07-09
132	4V5D\|1\|CY	Transfer RNA	MRNA, P AND A-SITE PHE-TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	76	2014-07-09
133	6QNR\|1\|3L	Transfer RNA	E. coli tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-ray diffraction	3.1	76	2019-06-19
134	4V5J\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-ray diffraction	3.1	76	2014-07-09
135	2ZXU\|1\|D	Transfer RNA	tRNA(Phe)	Escherichia coli	Bacteria	RF00005	Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPP	X-ray diffraction	2.75	69	2009-05-26
136	4V5Q\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	76	2014-07-09
137	4V5Q\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	76	2014-07-09
138	6QNR\|1\|1L	Transfer RNA	E. coli tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-ray diffraction	3.1	76	2019-06-19
139	4WQR\|1\|1K	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.15	76	2015-06-10
140	5NDK\|1\|V4	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	76	2017-12-13
141	4W2G\|1\|CY	Transfer RNA	A/P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	73	2014-10-15
142	4V6F\|1\|CD	Transfer RNA	MRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37	Escherichia coli	Bacteria	RF00005	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	76	2014-07-09
143	5NDJ\|1\|V4	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-ray diffraction	3.15	76	2018-05-02
144	5WIT\|1\|1y	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	74	2018-02-14
145	6QNR\|1\|5K	Transfer RNA	E. coli tRNAPhe	Escherichia coli	Bacteria	RF00005	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-ray diffraction	3.1	76	2019-06-19
146	4WZO\|1\|3L	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-fMet and mRNA	X-ray diffraction	3.3	76	2015-06-10
147	6QNR\|1\|3K	Transfer RNA	E. coli tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-ray diffraction	3.1	76	2019-06-19
148	6ND5\|1\|2w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	72	2019-03-20
149	4V5G\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA	X-ray diffraction	3.6	76	2014-07-09
150	4W2F\|1\|AY	Transfer RNA	A/P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	74	2014-10-15
151	4Y4P\|1\|2w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	72	2015-03-18
152	1VY7\|1\|AY	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	5	2014-08-20
153	6C5L\|1\|CW	Transfer RNA	E-site tRNA PHE OR P-site tRNA PHE (unmodified bases)	Escherichia coli	Bacteria	RF00005	Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)	X-ray diffraction	3.2	75	2018-02-21
154	6C5L\|1\|AW	Transfer RNA	E-site tRNA PHE OR P-site tRNA PHE (unmodified bases)	Escherichia coli	Bacteria	RF00005	Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)	X-ray diffraction	3.2	75	2018-02-21
155	5DOY\|1\|2w	Transfer RNA	A-site and E-site tRNAs, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	74	2015-12-30
156	1VY5\|1\|AW	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	74	2014-08-20
157	1VY4\|1\|CY	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	73	2014-08-20
158	4V6F\|1\|CB	Transfer RNA	MRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37	Escherichia coli	Bacteria	RF00005	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	76	2014-07-09
159	5WIT\|1\|2y	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	73	2018-02-14
160	4WSD\|1\|1L	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	76	2015-06-10
161	4WRO\|1\|3L	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-ray diffraction	3.05	76	2015-06-10
162	5NDK\|1\|V1	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	76	2017-12-13
163	4V5C\|1\|AW	Transfer RNA	E-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	76	2014-07-09
164	4V5G\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA	X-ray diffraction	3.6	76	2014-07-09
165	4W2F\|1\|CW	Transfer RNA	A/P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	72	2014-10-15
166	6XHV\|1\|1y	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	74	2020-12-23
167	4WRO\|1\|1L	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-ray diffraction	3.05	76	2015-06-10
168	4V5P\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	76	2014-07-09
169	6XHY\|1\|2y	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-ray diffraction	2.6	73	2020-12-23
170	4W2F\|1\|CY	Transfer RNA	A/P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	73	2014-10-15
171	4V5R\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	76	2014-07-09
172	6XHW\|1\|1y	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	74	2020-12-23
173	4V5C\|1\|CY	Transfer RNA	A-SITE PHE-TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	76	2014-07-09
174	4WPO\|1\|BW	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	74	2015-01-28
175	4WRO\|1\|3K	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-ray diffraction	3.05	76	2015-06-10
176	4V5R\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	76	2014-07-09
177	4V5C\|1\|AY	Transfer RNA	A-SITE PHE-TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	76	2014-07-09
178	4V6F\|1\|BB	Transfer RNA	MRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37	Escherichia coli	Bacteria	RF00005	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	76	2014-07-09
179	4V5P\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	76	2014-07-09
180	1VY7\|1\|CY	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	5	2014-08-20
181	5NDJ\|1\|V1	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-ray diffraction	3.15	76	2018-05-02
182	1VY5\|1\|AY	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	74	2014-08-20
183	4P6F\|1\|QW	Transfer RNA	E-Site tRNA-Phe or A-Site tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-ray diffraction	3.6	76	2014-10-01
184	6XHW\|1\|2y	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	73	2020-12-23
185	1VY4\|1\|CW	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	72	2014-08-20
186	4V5E\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Insights into translational termination from the structure of RF2 bound to the ribosome	X-ray diffraction	3.45	76	2014-07-09
187	7LH5\|1\|CW	Transfer RNA	E-Site tRNA Phe and A-site tRNA Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs	X-ray diffraction	3.27	76	2021-06-02
188	6UCQ\|1\|1y	Transfer RNA	P-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome recycling complex	X-ray diffraction	3.5	74	2019-12-25
189	6XHV\|1\|2y	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	73	2020-12-23
190	7LH5\|1\|AW	Transfer RNA	E-Site tRNA Phe and A-site tRNA Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs	X-ray diffraction	3.27	76	2021-06-02
191	4V97\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR A-SITE tRNA Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G299A.	X-ray diffraction	3.52	76	2014-07-09
192	4V4I\|1\|z	Transfer RNA	MRNA, P-site PHE-tRNA	Escherichia coli	Bacteria	RF00005	Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.	X-ray diffraction	3.71	76	2014-07-09
193	4P6F\|1\|XW	Transfer RNA	E-Site tRNA-Phe or A-Site tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-ray diffraction	3.6	76	2014-10-01
194	1VY5\|1\|CW	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	72	2014-08-20
195	4V5C\|1\|CW	Transfer RNA	E-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	76	2014-07-09
196	1VY5\|1\|CY	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	73	2014-08-20
197	6UCQ\|1\|1x	Transfer RNA	mRNA, P-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome recycling complex	X-ray diffraction	3.5	74	2019-12-25
198	4WQR\|1\|1L	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.15	76	2015-06-10
199	4V9I\|1\|AW	Transfer RNA	E-SITE tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	76	2014-07-09
200	4V9I\|1\|CW	Transfer RNA	E-SITE tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	76	2014-07-09
201	4WPO\|1\|DW	Transfer RNA	A-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	72	2015-01-28
202	4V97\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR A-SITE tRNA Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G299A.	X-ray diffraction	3.52	76	2014-07-09
203	4V5L\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog	X-ray diffraction	3.1	76	2014-07-09
204	4W2H\|1\|AY	Transfer RNA	E-site tRNA Acceptor Stem	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	18	2014-10-15
205	4V9C\|1\|CV	Transfer RNA	Messenger RNA, mRNA, Phenylalanine specific transfer RNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	76	2014-07-09
206	4V8J\|1\|AW	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G347U.	X-ray diffraction	3.9	76	2014-07-09
207	4WQU\|1\|BY	Transfer RNA	P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	74	2015-01-28
208	4W2H\|1\|CY	Transfer RNA	E-site tRNA Acceptor Stem	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	5	2014-10-15
209	6UCQ\|1\|2y	Transfer RNA	P-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome recycling complex	X-ray diffraction	3.5	74	2019-12-25
210	4V8J\|1\|CW	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G347U.	X-ray diffraction	3.9	76	2014-07-09
211	4W2E\|1\|x	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	74	2014-10-01
212	4WQU\|1\|DY	Transfer RNA	P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	73	2015-01-28
213	4WQF\|1\|BY	Transfer RNA	P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	74	2015-01-28
214	6UCQ\|1\|2x	Transfer RNA	mRNA, P-site and E-site tRNAs	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome recycling complex	X-ray diffraction	3.5	74	2019-12-25
215	4WQF\|1\|DY	Transfer RNA	P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	73	2015-01-28
216	7N1P\|1\|Dt	Transfer RNA	mRNA, tRNA	Escherichia coli K-12	Bacteria	RF00005	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	76	2021-07-14
217	7N2U\|1\|Dt	Transfer RNA	mRNA, tRNA	Escherichia coli K-12	Bacteria	RF00005	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	76	2021-07-14
218	6YSS\|1\|w	Transfer RNA	mRNA, P-site tRNAPhe	Escherichia coli	Bacteria	RF00005	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	76	2020-08-19
219	6AZ1\|1\|2	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin	Electron microscopy	2.7	76	2017-12-06
220	6AZ1\|1\|4	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin	Electron microscopy	2.7	76	2017-12-06
221	7N30\|1\|Dt	Transfer RNA	mRNA, tRNA	Escherichia coli K-12	Bacteria	RF00005	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	76	2021-07-14
222	7N31\|1\|Dt	Transfer RNA	mRNA, tRNA	Escherichia coli K-12	Bacteria	RF00005	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	76	2021-07-14
223	7N2C\|1\|Dt	Transfer RNA	Chains: mR, tRNA	Escherichia coli	Bacteria	RF00005	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	76	2021-07-14
224	6WDE\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	76	2020-07-01
225	6ZJ3\|1\|S3	Transfer RNA	A-site tRNA, P-tRNA	Euglena gracilis	Eukarya	RF00005	Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis	Electron microscopy	3.15	76	2020-10-07
226	6ZJ3\|1\|S4	Transfer RNA	E-tRNA	Euglena gracilis	Eukarya	RF00005	Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis	Electron microscopy	3.15	76	2020-10-07
227	5AFI\|1\|y	Transfer RNA	A/T-site Phe-tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	76	2015-03-11
228	6ZJ3\|1\|S2	Transfer RNA	A-site tRNA, A-tRNA	Euglena gracilis	Eukarya	RF00005	Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis	Electron microscopy	3.15	76	2020-10-07
229	6WDD\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)	Electron microscopy	3.2	76	2020-07-01
230	5UYM\|1\|Y	Transfer RNA	mRNA, Phe-tRNAPhe	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	76	2017-06-07
231	5UQ8\|1\|z	Transfer RNA	E-site tRNA Phe	Escherichia coli	Bacteria	RF00005	70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)	Electron microscopy	3.2	76	2018-03-07
232	6WNW\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA	Electron microscopy	3.2	76	2020-06-24
233	5WDT\|1\|y	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	76	2018-04-25
234	5WFS\|1\|y	Transfer RNA	mRNA, Phe-tRNA-Phe	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	76	2018-05-02
235	6WDG\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)	Electron microscopy	3.3	76	2020-07-01
236	6YSR\|1\|w	Transfer RNA	mRNA, P-site fMet-Phe-tRNA(Phe)	Escherichia coli	Bacteria	RF00005	Structure of the P+9 stalled ribosome complex	Electron microscopy	3.1	76	2020-08-19
237	6WDF\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)	Electron microscopy	3.3	76	2020-07-01
238	6VWL\|1\|5	Transfer RNA	tRNAPhe	Escherichia coli	Bacteria	RF00005	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)	Electron microscopy	3.1	76	2020-06-03
239	5WE4\|1\|y	Transfer RNA	mRNA, Phe-tRNA-Phe	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu wt complex with GppNHp	Electron microscopy	3.1	76	2018-04-25
240	7AC7\|1\|7	Transfer RNA	mRNA, tRNA-Phe	Escherichia coli	Bacteria	RF00005	Structure of accomodated trans-translation complex on E. Coli stalled ribosome.	Electron microscopy	3.08	76	2021-08-18
241	6YST\|1\|w	Transfer RNA	mRNA, P/E-site tRNAPhe	Escherichia coli	Bacteria	RF00005	Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state	Electron microscopy	3.2	76	2020-08-19
242	6ZTO\|1\|AX	Transfer RNA	mRNA, Phe-NH-tRNA(Phe) A-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	66	2020-09-23
243	6ZTP\|1\|AX	Transfer RNA	mRNA, Phe-NH-tRNA(Phe) A-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	66	2020-09-16
244	6ZU1\|1\|AX	Transfer RNA	mRNA, Phe-NH-tRNA(Phe) A-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	66	2020-09-16
245	7ABZ\|1\|7	Transfer RNA	tRNA-Phe	Escherichia coli K-12	Bacteria	RF00005	Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.	Electron microscopy	3.21	76	2021-08-18
246	3JCE\|1\|6	Transfer RNA	mRNA, tRNA	synthetic construct	Synthetic	RF00005	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	76	2016-01-13
247	6BU8\|1\|Y	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	70S ribosome with S1 domains 1 and 2 (Class 1)	Electron microscopy	3.5	76	2018-01-31
248	5UQ7\|1\|z	Transfer RNA	E-site tRNA Phe	Escherichia coli	Bacteria	RF00005	70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)	Electron microscopy	3.5	76	2018-03-07
249	6WD5\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)	Electron microscopy	3.6	76	2020-07-08
250	6WD3\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)	Electron microscopy	3.6	76	2020-07-08
251	5UYL\|1\|Y	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	Electron microscopy	3.6	76	2017-06-14
252	6WDK\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)	Electron microscopy	3.6	76	2020-07-08
253	6WD2\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)	Electron microscopy	3.6	76	2020-07-08
254	6WDM\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)	Electron microscopy	3.6	76	2020-07-01
255	5IQR\|1\|4	Transfer RNA	E-site tRNA(Phe)	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	76	2016-05-04
256	5WE6\|1\|y	Transfer RNA	mRNA, Phe-tRNA-Phe	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	Electron microscopy	3.4	76	2018-04-25
257	5WFK\|1\|y	Transfer RNA	mRNA, Phe-tRNA-Phe	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)	Electron microscopy	3.4	76	2018-05-02
258	6VWM\|1\|5	Transfer RNA	tRNAPhe	Escherichia coli	Bacteria	RF00005	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)	Electron microscopy	3.4	76	2020-06-03
259	6VWN\|1\|5	Transfer RNA	tRNAPhe	Escherichia coli	Bacteria	RF00005	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)	Electron microscopy	3.4	76	2020-06-03
260	6WD8\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)	Electron microscopy	3.7	76	2020-07-08
261	6WD6\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)	Electron microscopy	3.7	76	2020-07-08
262	6WD9\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)	Electron microscopy	3.7	76	2020-07-08
263	6WDJ\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)	Electron microscopy	3.7	76	2020-07-01
264	6WDL\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)	Electron microscopy	3.7	76	2020-07-01
265	6WD4\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)	Electron microscopy	3.7	76	2020-07-08
266	6WDA\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)	Electron microscopy	3.8	76	2020-07-08
267	6ZTM\|1\|AX	Transfer RNA	mRNA, Phe-NH-tRNA(Phe) A-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in collided state without NusG	Electron microscopy	3.3	66	2020-09-16
268	5WF0\|1\|y	Transfer RNA	Phe-tRNA-Phe	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)	Electron microscopy	3.6	76	2018-05-02
269	6O9J\|1\|v	Transfer RNA	P-tRNA	Escherichia coli	Bacteria	RF00005	70S Elongation Competent Ribosome	Electron microscopy	3.9	76	2019-05-29
270	5UYK\|1\|Y	Transfer RNA	tRNAPhe	Escherichia coli	Bacteria	RF00005	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	Electron microscopy	3.9	76	2017-06-07
271	6YSU\|1\|w	Transfer RNA	P-site tRNAPhe, RNA (5'-R(PAPUPGPUPUPC)-3')	Escherichia coli	Bacteria	RF00005	Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	3.7	76	2020-08-19
272	5OT7\|1\|2	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Elongation factor G-ribosome complex captures in the absence of inhibitors.	Electron microscopy	3.8	76	2018-02-14
273	6WD7\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)	Electron microscopy	3.9	75	2020-07-08
274	5KPX\|1\|30	Transfer RNA	A-site tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	Electron microscopy	3.9	76	2016-09-28
275	5KPW\|1\|30	Transfer RNA	A-site tRNAPhe, mRNA	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	Electron microscopy	3.9	76	2016-09-28
276	6ZTJ\|1\|AX	Transfer RNA	mRNA, Phe-NH-tRNA(Phe) A-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)	Electron microscopy	3.4	66	2020-09-16
277	6Q95\|1\|8	Transfer RNA	tRNA-Phe	Escherichia coli	Bacteria	RF00005	Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome	Electron microscopy	3.7	76	2019-02-27
278	3JCE\|1\|9	Transfer RNA	tRNA	synthetic construct	Synthetic	RF00005	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	76	2016-01-13
279	6WDI\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)	Electron microscopy	4	73	2020-07-01
280	6WDB\|1\|7	Transfer RNA	mRNA, tRNAPhe	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)	Electron microscopy	4	73	2020-07-01
281	6ZTL\|1\|AX	Transfer RNA	mRNA, Phe-NH-tRNA(Phe) A-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in collided state bound to NusG	Electron microscopy	3.5	66	2020-09-16
282	5IQR\|1\|6	Transfer RNA	A/T tRNA(Phe), mRNA	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	76	2016-05-04
283	6ZTN\|1\|AX	Transfer RNA	mRNA, Phe-NH-tRNA(Phe) A-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)	Electron microscopy	3.9	66	2020-09-16
284	3JCD\|1\|8	Transfer RNA	mRNA, tRNA	synthetic construct	Synthetic	RF00005	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	Electron microscopy	3.7	76	2016-01-13
285	6ZTN\|1\|AZ	Transfer RNA	mRNA, Phe-NH-tRNA(Phe) A-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)	Electron microscopy	3.9	66	2020-09-16
286	3JCD\|1\|9	Transfer RNA	tRNA	synthetic construct	Synthetic	RF00005	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	Electron microscopy	3.7	76	2016-01-13
287	3JBV\|1\|V	Transfer RNA	RNA (5'-R(PCPUPGPGPCPCPCPUPCPAP*A)-3'), RNA (76-MER)	Escherichia coli	Bacteria	RF00005	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	76	2016-01-27

Release history

Release	3.192	3.193	3.194	3.195	3.196	3.197	3.198	3.199
Date	2021-08-18	2021-08-25	2021-09-01	2021-09-08	2021-09-15	2021-09-22	2021-09-29	2021-10-06

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_19951.47	NR_4.0_19951.46	3.192	(285) 1VY4\|1\|AW, 1VY4\|1\|AY, 1VY4\|1\|CW, 1VY4\|1\|CY, 1VY5\|1\|AW, 1VY5\|1\|AY, 1VY5\|1\|CW, 1VY5\|1\|CY, 1VY7\|1\|AY, 1VY7\|1\|CY, 2ZM5\|1\|C, 2ZM5\|1\|D, 2ZXU\|1\|C, 2ZXU\|1\|D, 3FOZ\|1\|C, 3JBV\|1\|V, 3JCD\|1\|8, 3JCD\|1\|9, 3JCE\|1\|6, 3JCE\|1\|9, 3L0U\|1\|A, 4P6F\|1\|QW, 4P6F\|1\|XW, 4V4I\|1\|z, 4V51\|1\|AW, 4V51\|1\|CW, 4V5C\|1\|AW, 4V5C\|1\|AY, 4V5C\|1\|CW, 4V5C\|1\|CY, 4V5D\|1\|AV, 4V5D\|1\|AW, 4V5D\|1\|AY, 4V5D\|1\|CV, 4V5D\|1\|CW, 4V5D\|1\|CY, 4V5E\|1\|AV, 4V5E\|1\|AW, 4V5E\|1\|CV, 4V5E\|1\|CW, 4V5G\|1\|AV, 4V5G\|1\|AW, 4V5G\|1\|CV, 4V5G\|1\|CW, 4V5J\|1\|AV, 4V5J\|1\|AW, 4V5J\|1\|CV, 4V5J\|1\|CW, 4V5L\|1\|AV, 4V5L\|1\|AW, 4V5P\|1\|AV, 4V5P\|1\|AW, 4V5P\|1\|CV, 4V5P\|1\|CW, 4V5Q\|1\|AV, 4V5Q\|1\|AW, 4V5Q\|1\|CV, 4V5Q\|1\|CW, 4V5R\|1\|AV, 4V5R\|1\|AW, 4V5R\|1\|CV, 4V5R\|1\|CW, 4V5S\|1\|AV, 4V5S\|1\|AW, 4V5S\|1\|CV, 4V5S\|1\|CW, 4V6F\|1\|BB, 4V6F\|1\|BC, 4V6F\|1\|BD, 4V6F\|1\|CB, 4V6F\|1\|CC, 4V6F\|1\|CD, 4V8J\|1\|AW, 4V8J\|1\|CW, 4V97\|1\|AW, 4V97\|1\|CW, 4V9C\|1\|AV, 4V9C\|1\|CV, 4V9D\|1\|AV, 4V9D\|1\|BV, 4V9H\|1\|AV, 4V9I\|1\|AW, 4V9I\|1\|CW, 4W2E\|1\|w, 4W2E\|1\|x, 4W2F\|1\|AW, 4W2F\|1\|AY, 4W2F\|1\|CW, 4W2F\|1\|CY, 4W2G\|1\|AW, 4W2G\|1\|AY, 4W2G\|1\|CW, 4W2G\|1\|CY, 4W2H\|1\|AY, 4W2H\|1\|CY, 4W2I\|1\|AW, 4W2I\|1\|AY, 4W2I\|1\|CW, 4W2I\|1\|CY, 4WOI\|1\|AX, 4WOI\|1\|DW, 4WPO\|1\|BW, 4WPO\|1\|BY, 4WPO\|1\|DW, 4WPO\|1\|DY, 4WQF\|1\|BW, 4WQF\|1\|BY, 4WQF\|1\|DW, 4WQF\|1\|DY, 4WQR\|1\|1K, 4WQR\|1\|1L, 4WQR\|1\|3K, 4WQR\|1\|3L, 4WQU\|1\|BW, 4WQU\|1\|BY, 4WQU\|1\|DW, 4WQU\|1\|DY, 4WRO\|1\|1K, 4WRO\|1\|1L, 4WRO\|1\|3K, 4WRO\|1\|3L, 4WSD\|1\|1K, 4WSD\|1\|1L, 4WSD\|1\|3K, 4WSD\|1\|3L, 4WT1\|1\|1K, 4WT1\|1\|1L, 4WT1\|1\|3K, 4WT1\|1\|3L, 4WZO\|1\|3K, 4WZO\|1\|3L, 4Y4P\|1\|1w, 4Y4P\|1\|1y, 4Y4P\|1\|2w, 4Y4P\|1\|2y, 4YCO\|1\|D, 4YCO\|1\|E, 4YCO\|1\|F, 4Z3S\|1\|1w, 4Z3S\|1\|1y, 4Z3S\|1\|2w, 4Z3S\|1\|2y, 5AFI\|1\|y, 5DOY\|1\|1w, 5DOY\|1\|1y, 5DOY\|1\|2w, 5DOY\|1\|2y, 5IQR\|1\|4, 5IQR\|1\|6, 5J4B\|1\|1w, 5J4B\|1\|1y, 5J4B\|1\|2w, 5J4B\|1\|2y, 5J4C\|1\|1w, 5J4C\|1\|1y, 5J4C\|1\|2w, 5J4C\|1\|2y, 5KPW\|1\|30, 5KPX\|1\|30, 5NDJ\|1\|V1, 5NDJ\|1\|V4, 5NDJ\|1\|W1, 5NDJ\|1\|W4, 5NDJ\|1\|X1, 5NDJ\|1\|X4, 5NDK\|1\|V1, 5NDK\|1\|V4, 5NDK\|1\|W1, 5NDK\|1\|W4, 5NDK\|1\|X1, 5NDK\|1\|X4, 5OT7\|1\|2, 5UQ7\|1\|z, 5UQ8\|1\|z, 5UYK\|1\|Y, 5UYL\|1\|Y, 5UYM\|1\|Y, 5W4K\|1\|1w, 5W4K\|1\|1y, 5W4K\|1\|2w, 5W4K\|1\|2y, 5WDT\|1\|y, 5WE4\|1\|y, 5WE6\|1\|y, 5WF0\|1\|y, 5WFK\|1\|y, 5WFS\|1\|y, 5WIS\|1\|1w, 5WIS\|1\|1y, 5WIS\|1\|2w, 5WIS\|1\|2y, 5WIT\|1\|1w, 5WIT\|1\|1y, 5WIT\|1\|2w, 5WIT\|1\|2y, 6AZ1\|1\|2, 6AZ1\|1\|4, 6BU8\|1\|Y, 6C5L\|1\|AV, 6C5L\|1\|AW, 6C5L\|1\|CV, 6C5L\|1\|CW, 6CFJ\|1\|1w, 6CFJ\|1\|1y, 6CFJ\|1\|2w, 6CFJ\|1\|2y, 6ND5\|1\|1w, 6ND5\|1\|1y, 6ND5\|1\|2w, 6ND5\|1\|2y, 6O9J\|1\|v, 6Q95\|1\|8, 6QNR\|1\|1K, 6QNR\|1\|1L, 6QNR\|1\|2K, 6QNR\|1\|2L, 6QNR\|1\|3K, 6QNR\|1\|3L, 6QNR\|1\|5K, 6UCQ\|1\|1x, 6UCQ\|1\|1y, 6UCQ\|1\|2x, 6UCQ\|1\|2y, 6UO1\|1\|1w, 6UO1\|1\|1y, 6UO1\|1\|2w, 6UO1\|1\|2y, 6VWL\|1\|5, 6VWM\|1\|5, 6VWN\|1\|5, 6WD2\|1\|7, 6WD3\|1\|7, 6WD4\|1\|7, 6WD5\|1\|7, 6WD6\|1\|7, 6WD7\|1\|7, 6WD8\|1\|7, 6WD9\|1\|7, 6WDA\|1\|7, 6WDB\|1\|7, 6WDD\|1\|7, 6WDE\|1\|7, 6WDF\|1\|7, 6WDG\|1\|7, 6WDI\|1\|7, 6WDJ\|1\|7, 6WDK\|1\|7, 6WDL\|1\|7, 6WDM\|1\|7, 6WNW\|1\|7, 6XHV\|1\|1w, 6XHV\|1\|1y, 6XHV\|1\|2w, 6XHV\|1\|2y, 6XHW\|1\|1w, 6XHW\|1\|1y, 6XHW\|1\|2w, 6XHW\|1\|2y, 6XHY\|1\|1w, 6XHY\|1\|1y, 6XHY\|1\|2w, 6XHY\|1\|2y, 6Y3G\|1\|F, 6YSR\|1\|w, 6YSS\|1\|w, 6YST\|1\|w, 6YSU\|1\|w, 6ZJ3\|1\|S2, 6ZJ3\|1\|S3, 6ZJ3\|1\|S4, 6ZTJ\|1\|AX, 6ZTL\|1\|AX, 6ZTM\|1\|AX, 6ZTN\|1\|AX, 6ZTN\|1\|AZ, 6ZTO\|1\|AX, 6ZTP\|1\|AX, 6ZU1\|1\|AX, 7LH5\|1\|AW, 7LH5\|1\|CW, 7N1P\|1\|Dt, 7N2C\|1\|Dt, 7N2U\|1\|Dt, 7N30\|1\|Dt, 7N31\|1\|Dt	(2) 7ABZ\|1\|7, 7AC7\|1\|7	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_19951.47	NR_4.0_19951.48	3.200	(287) 1VY4\|1\|AW, 1VY4\|1\|AY, 1VY4\|1\|CW, 1VY4\|1\|CY, 1VY5\|1\|AW, 1VY5\|1\|AY, 1VY5\|1\|CW, 1VY5\|1\|CY, 1VY7\|1\|AY, 1VY7\|1\|CY, 2ZM5\|1\|C, 2ZM5\|1\|D, 2ZXU\|1\|C, 2ZXU\|1\|D, 3FOZ\|1\|C, 3JBV\|1\|V, 3JCD\|1\|8, 3JCD\|1\|9, 3JCE\|1\|6, 3JCE\|1\|9, 3L0U\|1\|A, 4P6F\|1\|QW, 4P6F\|1\|XW, 4V4I\|1\|z, 4V51\|1\|AW, 4V51\|1\|CW, 4V5C\|1\|AW, 4V5C\|1\|AY, 4V5C\|1\|CW, 4V5C\|1\|CY, 4V5D\|1\|AV, 4V5D\|1\|AW, 4V5D\|1\|AY, 4V5D\|1\|CV, 4V5D\|1\|CW, 4V5D\|1\|CY, 4V5E\|1\|AV, 4V5E\|1\|AW, 4V5E\|1\|CV, 4V5E\|1\|CW, 4V5G\|1\|AV, 4V5G\|1\|AW, 4V5G\|1\|CV, 4V5G\|1\|CW, 4V5J\|1\|AV, 4V5J\|1\|AW, 4V5J\|1\|CV, 4V5J\|1\|CW, 4V5L\|1\|AV, 4V5L\|1\|AW, 4V5P\|1\|AV, 4V5P\|1\|AW, 4V5P\|1\|CV, 4V5P\|1\|CW, 4V5Q\|1\|AV, 4V5Q\|1\|AW, 4V5Q\|1\|CV, 4V5Q\|1\|CW, 4V5R\|1\|AV, 4V5R\|1\|AW, 4V5R\|1\|CV, 4V5R\|1\|CW, 4V5S\|1\|AV, 4V5S\|1\|AW, 4V5S\|1\|CV, 4V5S\|1\|CW, 4V6F\|1\|BB, 4V6F\|1\|BC, 4V6F\|1\|BD, 4V6F\|1\|CB, 4V6F\|1\|CC, 4V6F\|1\|CD, 4V8J\|1\|AW, 4V8J\|1\|CW, 4V97\|1\|AW, 4V97\|1\|CW, 4V9C\|1\|AV, 4V9C\|1\|CV, 4V9D\|1\|AV, 4V9D\|1\|BV, 4V9H\|1\|AV, 4V9I\|1\|AW, 4V9I\|1\|CW, 4W2E\|1\|w, 4W2E\|1\|x, 4W2F\|1\|AW, 4W2F\|1\|AY, 4W2F\|1\|CW, 4W2F\|1\|CY, 4W2G\|1\|AW, 4W2G\|1\|AY, 4W2G\|1\|CW, 4W2G\|1\|CY, 4W2H\|1\|AY, 4W2H\|1\|CY, 4W2I\|1\|AW, 4W2I\|1\|AY, 4W2I\|1\|CW, 4W2I\|1\|CY, 4WOI\|1\|AX, 4WOI\|1\|DW, 4WPO\|1\|BW, 4WPO\|1\|BY, 4WPO\|1\|DW, 4WPO\|1\|DY, 4WQF\|1\|BW, 4WQF\|1\|BY, 4WQF\|1\|DW, 4WQF\|1\|DY, 4WQR\|1\|1K, 4WQR\|1\|1L, 4WQR\|1\|3K, 4WQR\|1\|3L, 4WQU\|1\|BW, 4WQU\|1\|BY, 4WQU\|1\|DW, 4WQU\|1\|DY, 4WRO\|1\|1K, 4WRO\|1\|1L, 4WRO\|1\|3K, 4WRO\|1\|3L, 4WSD\|1\|1K, 4WSD\|1\|1L, 4WSD\|1\|3K, 4WSD\|1\|3L, 4WT1\|1\|1K, 4WT1\|1\|1L, 4WT1\|1\|3K, 4WT1\|1\|3L, 4WZO\|1\|3K, 4WZO\|1\|3L, 4Y4P\|1\|1w, 4Y4P\|1\|1y, 4Y4P\|1\|2w, 4Y4P\|1\|2y, 4YCO\|1\|D, 4YCO\|1\|E, 4YCO\|1\|F, 4Z3S\|1\|1w, 4Z3S\|1\|1y, 4Z3S\|1\|2w, 4Z3S\|1\|2y, 5AFI\|1\|y, 5DOY\|1\|1w, 5DOY\|1\|1y, 5DOY\|1\|2w, 5DOY\|1\|2y, 5IQR\|1\|4, 5IQR\|1\|6, 5J4B\|1\|1w, 5J4B\|1\|1y, 5J4B\|1\|2w, 5J4B\|1\|2y, 5J4C\|1\|1w, 5J4C\|1\|1y, 5J4C\|1\|2w, 5J4C\|1\|2y, 5KPW\|1\|30, 5KPX\|1\|30, 5NDJ\|1\|V1, 5NDJ\|1\|V4, 5NDJ\|1\|W1, 5NDJ\|1\|W4, 5NDJ\|1\|X1, 5NDJ\|1\|X4, 5NDK\|1\|V1, 5NDK\|1\|V4, 5NDK\|1\|W1, 5NDK\|1\|W4, 5NDK\|1\|X1, 5NDK\|1\|X4, 5OT7\|1\|2, 5UQ7\|1\|z, 5UQ8\|1\|z, 5UYK\|1\|Y, 5UYL\|1\|Y, 5UYM\|1\|Y, 5W4K\|1\|1w, 5W4K\|1\|1y, 5W4K\|1\|2w, 5W4K\|1\|2y, 5WDT\|1\|y, 5WE4\|1\|y, 5WE6\|1\|y, 5WF0\|1\|y, 5WFK\|1\|y, 5WFS\|1\|y, 5WIS\|1\|1w, 5WIS\|1\|1y, 5WIS\|1\|2w, 5WIS\|1\|2y, 5WIT\|1\|1w, 5WIT\|1\|1y, 5WIT\|1\|2w, 5WIT\|1\|2y, 6AZ1\|1\|2, 6AZ1\|1\|4, 6BU8\|1\|Y, 6C5L\|1\|AV, 6C5L\|1\|AW, 6C5L\|1\|CV, 6C5L\|1\|CW, 6CFJ\|1\|1w, 6CFJ\|1\|1y, 6CFJ\|1\|2w, 6CFJ\|1\|2y, 6ND5\|1\|1w, 6ND5\|1\|1y, 6ND5\|1\|2w, 6ND5\|1\|2y, 6O9J\|1\|v, 6Q95\|1\|8, 6QNR\|1\|1K, 6QNR\|1\|1L, 6QNR\|1\|2K, 6QNR\|1\|2L, 6QNR\|1\|3K, 6QNR\|1\|3L, 6QNR\|1\|5K, 6UCQ\|1\|1x, 6UCQ\|1\|1y, 6UCQ\|1\|2x, 6UCQ\|1\|2y, 6UO1\|1\|1w, 6UO1\|1\|1y, 6UO1\|1\|2w, 6UO1\|1\|2y, 6VWL\|1\|5, 6VWM\|1\|5, 6VWN\|1\|5, 6WD2\|1\|7, 6WD3\|1\|7, 6WD4\|1\|7, 6WD5\|1\|7, 6WD6\|1\|7, 6WD7\|1\|7, 6WD8\|1\|7, 6WD9\|1\|7, 6WDA\|1\|7, 6WDB\|1\|7, 6WDD\|1\|7, 6WDE\|1\|7, 6WDF\|1\|7, 6WDG\|1\|7, 6WDI\|1\|7, 6WDJ\|1\|7, 6WDK\|1\|7, 6WDL\|1\|7, 6WDM\|1\|7, 6WNW\|1\|7, 6XHV\|1\|1w, 6XHV\|1\|1y, 6XHV\|1\|2w, 6XHV\|1\|2y, 6XHW\|1\|1w, 6XHW\|1\|1y, 6XHW\|1\|2w, 6XHW\|1\|2y, 6XHY\|1\|1w, 6XHY\|1\|1y, 6XHY\|1\|2w, 6XHY\|1\|2y, 6Y3G\|1\|F, 6YSR\|1\|w, 6YSS\|1\|w, 6YST\|1\|w, 6YSU\|1\|w, 6ZJ3\|1\|S2, 6ZJ3\|1\|S3, 6ZJ3\|1\|S4, 6ZTJ\|1\|AX, 6ZTL\|1\|AX, 6ZTM\|1\|AX, 6ZTN\|1\|AX, 6ZTN\|1\|AZ, 6ZTO\|1\|AX, 6ZTP\|1\|AX, 6ZU1\|1\|AX, 7ABZ\|1\|7, 7AC7\|1\|7, 7LH5\|1\|AW, 7LH5\|1\|CW, 7N1P\|1\|Dt, 7N2C\|1\|Dt, 7N2U\|1\|Dt, 7N30\|1\|Dt, 7N31\|1\|Dt	(0)	(8) 7RQ8\|1\|1w, 7RQ8\|1\|1y, 7RQ8\|1\|2w, 7RQ8\|1\|2y, 7RQ9\|1\|1w, 7RQ9\|1\|1y, 7RQ9\|1\|2w, 7RQ9\|1\|2y

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	6ZJ3\|1\|S3	Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis	ELECTRON MICROSCOPY	3.15	76
2	6WDF\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)	ELECTRON MICROSCOPY	3.3	76
3	6WDG\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)	ELECTRON MICROSCOPY	3.3	76
4	3JBV\|1\|V	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	76
5	5DOY\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	74
6	4Z3S\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	73
7	4Z3S\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	74
8	5DOY\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	75
9	6QNR\|1\|1L	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-RAY DIFFRACTION	3.1	76
10	6QNR\|1\|1K	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-RAY DIFFRACTION	3.1	76
11	5NDK\|1\|W4	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	76
12	5NDJ\|1\|W4	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-RAY DIFFRACTION	3.15	76
13	5NDJ\|1\|W1	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-RAY DIFFRACTION	3.15	76
14	5NDK\|1\|W1	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	76
15	4V6F\|1\|CB	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	76
16	4V6F\|1\|BB	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	76
17	4WT1\|1\|1L	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	76
18	4WSD\|1\|1L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	76
19	4WRO\|1\|1L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	76
20	4WQR\|1\|1L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.15	76
21	4WQR\|1\|1K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.15	76
22	4WT1\|1\|1K	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	76
23	4WSD\|1\|1K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	76
24	4WRO\|1\|1K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	74
25	6XHV\|1\|1w	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	74
26	6XHY\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	74
27	6XHW\|1\|1w	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	74
28	6CFJ\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	74
29	5W4K\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	74
30	5J4C\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	74
31	5J4B\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	74
32	5WIS\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	74
33	4Y4P\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	74
34	6ND5\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	74
35	5WIT\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	74
36	4W2F\|1\|AW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	74
37	4W2G\|1\|AW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	74
38	4WPO\|1\|BW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	74
39	1VY4\|1\|AW	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	74
40	1VY5\|1\|AW	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	74
41	4W2I\|1\|AW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	74
42	6UO1\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	71
43	6UO1\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	69
44	6XHW\|1\|2w	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	72
45	6XHY\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	72
46	6XHV\|1\|2w	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	72
47	6CFJ\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	72
48	5W4K\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	72
49	5J4C\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	72
50	5J4B\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
51	5WIS\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	72
52	4Y4P\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	72
53	6ND5\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	72
54	4W2F\|1\|CW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
55	4W2G\|1\|CW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
56	1VY5\|1\|CW	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
57	1VY4\|1\|CW	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	72
58	4WPO\|1\|DW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	72
59	4W2I\|1\|CW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
60	5WIT\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
61	4V5D\|1\|AY	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	76
62	4V5C\|1\|CY	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
63	4V5C\|1\|AY	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
64	4V5D\|1\|CY	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	76
65	6AZ1\|1\|2	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin	ELECTRON MICROSCOPY	2.7	76
66	6ZJ3\|1\|S2	Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis	ELECTRON MICROSCOPY	3.15	76
67	6VWN\|1\|5	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)	ELECTRON MICROSCOPY	3.4	76
68	6VWM\|1\|5	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)	ELECTRON MICROSCOPY	3.4	76
69	7ABZ\|1\|7	Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.	ELECTRON MICROSCOPY	3.21	76
70	6WDI\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)	ELECTRON MICROSCOPY	4	73
71	6BU8\|1\|Y	70S ribosome with S1 domains 1 and 2 (Class 1)	ELECTRON MICROSCOPY	3.5	76
72	6WDK\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)	ELECTRON MICROSCOPY	3.6	76
73	6WDE\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	76
74	6WDM\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)	ELECTRON MICROSCOPY	3.6	76
75	6WDL\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)	ELECTRON MICROSCOPY	3.7	76
76	6WDJ\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)	ELECTRON MICROSCOPY	3.7	76
77	6WDD\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)	ELECTRON MICROSCOPY	3.2	76
78	6WNW\|1\|7	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA	ELECTRON MICROSCOPY	3.2	76
79	6ZTL\|1\|AX	E. coli 70S-RNAP expressome complex in collided state bound to NusG	ELECTRON MICROSCOPY	3.5	66
80	6ZTJ\|1\|AX	E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)	ELECTRON MICROSCOPY	3.4	66
81	6ZTN\|1\|AX	E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)	ELECTRON MICROSCOPY	3.9	66
82	6ZTO\|1\|AX	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	66
83	6ZU1\|1\|AX	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	66
84	6ZTP\|1\|AX	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	66
85	6ZTM\|1\|AX	E. coli 70S-RNAP expressome complex in collided state without NusG	ELECTRON MICROSCOPY	3.3	66
86	6YSU\|1\|w	Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	3.7	76
87	4WQU\|1\|DW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	76
88	4WQF\|1\|DW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	76
89	4V4I\|1\|z	Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.	X-RAY DIFFRACTION	3.71	76
90	4W2E\|1\|w	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	76
91	4WQF\|1\|BW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	76
92	4WQU\|1\|BW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	76
93	7N1P\|1\|Dt	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	76
94	6YSR\|1\|w	Structure of the P+9 stalled ribosome complex	ELECTRON MICROSCOPY	3.1	76
95	6YSS\|1\|w	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	76
96	3JCD\|1\|8	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	ELECTRON MICROSCOPY	3.7	76
97	4V5J\|1\|AV	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-RAY DIFFRACTION	3.1	76
98	6C5L\|1\|AV	Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)	X-RAY DIFFRACTION	3.2	76
99	6C5L\|1\|CV	Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)	X-RAY DIFFRACTION	3.2	76
100	4V5J\|1\|CV	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-RAY DIFFRACTION	3.1	76
101	4V5E\|1\|AV	Insights into translational termination from the structure of RF2 bound to the ribosome	X-RAY DIFFRACTION	3.45	76
102	4V5E\|1\|CV	Insights into translational termination from the structure of RF2 bound to the ribosome	X-RAY DIFFRACTION	3.45	76
103	4V5D\|1\|CV	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	76
104	4V5G\|1\|CV	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA	X-RAY DIFFRACTION	3.6	76
105	4V5G\|1\|AV	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA	X-RAY DIFFRACTION	3.6	76
106	4V5D\|1\|AV	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	76
107	4V5S\|1\|AV	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	76
108	4V5Q\|1\|AV	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	76
109	4V5P\|1\|AV	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	76
110	4V5P\|1\|CV	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	76
111	4V5R\|1\|CV	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	76
112	4V5R\|1\|AV	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	76
113	4V5S\|1\|CV	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	76
114	4V5L\|1\|AV	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog	X-RAY DIFFRACTION	3.1	76
115	4V5Q\|1\|CV	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	76
116	4V6F\|1\|CC	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	76
117	5NDK\|1\|X1	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	76
118	5NDJ\|1\|X1	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-RAY DIFFRACTION	3.15	76
119	7AC7\|1\|7	Structure of accomodated trans-translation complex on E. Coli stalled ribosome.	ELECTRON MICROSCOPY	3.08	76
120	5NDJ\|1\|X4	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-RAY DIFFRACTION	3.15	76
121	5NDK\|1\|X4	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	76
122	4V6F\|1\|BC	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	76
123	6QNR\|1\|2L	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-RAY DIFFRACTION	3.1	76
124	4V9D\|1\|BV	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	76
125	6O9J\|1\|v	70S Elongation Competent Ribosome	ELECTRON MICROSCOPY	3.9	76
126	4WOI\|1\|DW	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	76
127	4V9C\|1\|AV	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	76
128	6QNR\|1\|2K	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-RAY DIFFRACTION	3.1	76
129	6QNR\|1\|5K	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-RAY DIFFRACTION	3.1	76
130	6WDB\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)	ELECTRON MICROSCOPY	4	73
131	4YCO\|1\|E	E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe	X-RAY DIFFRACTION	2.1	67
132	4YCO\|1\|D	E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe	X-RAY DIFFRACTION	2.1	74
133	4YCO\|1\|F	E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe	X-RAY DIFFRACTION	2.1	71
134	3JCE\|1\|6	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	76
135	6UCQ\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome recycling complex	X-RAY DIFFRACTION	3.5	74
136	6UCQ\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome recycling complex	X-RAY DIFFRACTION	3.5	74
137	4WZO\|1\|3K	Complex of 70S ribosome with tRNA-fMet and mRNA	X-RAY DIFFRACTION	3.3	76
138	4WRO\|1\|3K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	76
139	4WT1\|1\|3K	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	76
140	4WQR\|1\|3K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.15	76
141	4WSD\|1\|3K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	75
142	5NDJ\|1\|V1	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-RAY DIFFRACTION	3.15	76
143	5NDK\|1\|V1	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	76
144	5NDK\|1\|V4	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	76
145	5NDJ\|1\|V4	Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)	X-RAY DIFFRACTION	3.15	76
146	4V6F\|1\|CD	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	76
147	4V6F\|1\|BD	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	76
148	4WSD\|1\|3L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	76
149	4WT1\|1\|3L	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	76
150	4WRO\|1\|3L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	76
151	4WZO\|1\|3L	Complex of 70S ribosome with tRNA-fMet and mRNA	X-RAY DIFFRACTION	3.3	76
152	4WQR\|1\|3L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.15	76
153	6QNR\|1\|3L	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-RAY DIFFRACTION	3.1	76
154	6QNR\|1\|3K	70S ribosome elongation complex (EC) with experimentally assigned potassium ions	X-RAY DIFFRACTION	3.1	76
155	7LH5\|1\|AW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs	X-RAY DIFFRACTION	3.27	76
156	7LH5\|1\|CW	Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs	X-RAY DIFFRACTION	3.27	76
157	4V9I\|1\|CW	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	76
158	4V9I\|1\|AW	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	76
159	4W2H\|1\|AY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	18
160	4W2G\|1\|CY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	73
161	4W2I\|1\|CY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	73
162	1VY5\|1\|CY	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	73
163	1VY4\|1\|CY	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	73
164	4WQU\|1\|DY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	73
165	4WQF\|1\|DY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	73
166	4WPO\|1\|DY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	73
167	4Z3S\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	73
168	5DOY\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	73
169	4W2F\|1\|CY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	73
170	5J4C\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	73
171	5J4B\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	73
172	4Y4P\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	73
173	6CFJ\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	73
174	6XHV\|1\|2y	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	73
175	6XHY\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	73
176	6XHW\|1\|2y	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	73
177	5WIT\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	73
178	6UO1\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	73
179	5WIS\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	73
180	5W4K\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	73
181	6ND5\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	73
182	5W4K\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	74
183	5WIS\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	74
184	6ND5\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	74
185	5J4C\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	74
186	5J4B\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	74
187	4Y4P\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	74
188	6CFJ\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	74
189	6XHW\|1\|1y	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	74
190	6XHY\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	74
191	6XHV\|1\|1y	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	74
192	5DOY\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	74
193	4Z3S\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	74
194	4W2F\|1\|AY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	74
195	5WIT\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	74
196	6UO1\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	74
197	4W2G\|1\|AY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	74
198	4W2I\|1\|AY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	74
199	1VY5\|1\|AY	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	74
200	1VY4\|1\|AY	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	74
201	4W2E\|1\|x	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	74
202	4WQF\|1\|BY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	74
203	4WQU\|1\|BY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	74
204	4WPO\|1\|BY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	74
205	6UCQ\|1\|1y	Crystal structure of the Thermus thermophilus 70S ribosome recycling complex	X-RAY DIFFRACTION	3.5	74
206	6UCQ\|1\|2y	Crystal structure of the Thermus thermophilus 70S ribosome recycling complex	X-RAY DIFFRACTION	3.5	74
207	4V5E\|1\|CW	Insights into translational termination from the structure of RF2 bound to the ribosome	X-RAY DIFFRACTION	3.45	76
208	4V51\|1\|CW	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
209	4V51\|1\|AW	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
210	4V5D\|1\|CW	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	76
211	4V5D\|1\|AW	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	76
212	4P6F\|1\|QW	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-RAY DIFFRACTION	3.6	76
213	4V97\|1\|AW	Crystal structure of the bacterial ribosome ram mutation G299A.	X-RAY DIFFRACTION	3.52	76
214	4V8J\|1\|AW	Crystal structure of the bacterial ribosome ram mutation G347U.	X-RAY DIFFRACTION	3.9	76
215	4V5C\|1\|AW	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
216	4V5C\|1\|CW	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
217	4P6F\|1\|XW	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-RAY DIFFRACTION	3.6	76
218	4V97\|1\|CW	Crystal structure of the bacterial ribosome ram mutation G299A.	X-RAY DIFFRACTION	3.52	76
219	4V8J\|1\|CW	Crystal structure of the bacterial ribosome ram mutation G347U.	X-RAY DIFFRACTION	3.9	76
220	5UQ7\|1\|z	70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)	ELECTRON MICROSCOPY	3.5	76
221	6Q95\|1\|8	Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome	ELECTRON MICROSCOPY	3.7	76
222	6C5L\|1\|CW	Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)	X-RAY DIFFRACTION	3.2	75
223	6C5L\|1\|AW	Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)	X-RAY DIFFRACTION	3.2	75
224	4V5J\|1\|CW	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-RAY DIFFRACTION	3.1	76
225	4V5J\|1\|AW	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-RAY DIFFRACTION	3.1	76
226	4V5E\|1\|AW	Insights into translational termination from the structure of RF2 bound to the ribosome	X-RAY DIFFRACTION	3.45	76
227	3JCE\|1\|9	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	76
228	4V5Q\|1\|CW	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	76
229	4V5S\|1\|CW	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	76
230	4V5G\|1\|CW	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA	X-RAY DIFFRACTION	3.6	76
231	4V5G\|1\|AW	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA	X-RAY DIFFRACTION	3.6	76
232	4V5P\|1\|CW	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	76
233	4V5P\|1\|AW	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	76
234	4V5R\|1\|AW	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	76
235	4V5R\|1\|CW	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	76
236	4V5Q\|1\|AW	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	76
237	4V5S\|1\|AW	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	76
238	4V5L\|1\|AW	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog	X-RAY DIFFRACTION	3.1	76
239	5IQR\|1\|4	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	76
240	6ZJ3\|1\|S4	Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis	ELECTRON MICROSCOPY	3.15	76
241	6AZ1\|1\|4	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin	ELECTRON MICROSCOPY	2.7	76
242	3JCD\|1\|9	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	ELECTRON MICROSCOPY	3.7	76
243	6YST\|1\|w	Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state	ELECTRON MICROSCOPY	3.2	76
244	3FOZ\|1\|C	Structure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)	X-RAY DIFFRACTION	2.5	74
245	2ZM5\|1\|C	Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)	X-RAY DIFFRACTION	2.55	74
246	2ZXU\|1\|C	Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPP	X-RAY DIFFRACTION	2.75	74
247	2ZM5\|1\|D	Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)	X-RAY DIFFRACTION	2.55	69
248	2ZXU\|1\|D	Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPP	X-RAY DIFFRACTION	2.75	69
249	4V9C\|1\|CV	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	76
250	4WOI\|1\|AX	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	76
251	3L0U\|1\|A	The crystal structure of unmodified tRNAPhe from Escherichia coli	X-RAY DIFFRACTION	3	73
252	6Y3G\|1\|F	Crystal structure of phenylalanine tRNA from Escherichia coli	X-RAY DIFFRACTION	3.1	75
253	4V9D\|1\|AV	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	76
254	4V9H\|1\|AV	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-RAY DIFFRACTION	2.86	74
255	5OT7\|1\|2	Elongation factor G-ribosome complex captures in the absence of inhibitors.	ELECTRON MICROSCOPY	3.8	76
256	6VWL\|1\|5	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)	ELECTRON MICROSCOPY	3.1	76
257	7N31\|1\|Dt	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	76
258	6ZTN\|1\|AZ	E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)	ELECTRON MICROSCOPY	3.9	66
259	7N2C\|1\|Dt	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	76
260	7N2U\|1\|Dt	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	76
261	7N30\|1\|Dt	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	76
262	5UYK\|1\|Y	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	ELECTRON MICROSCOPY	3.9	76
263	6WD8\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)	ELECTRON MICROSCOPY	3.7	76
264	6WD4\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)	ELECTRON MICROSCOPY	3.7	76
265	6WD6\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)	ELECTRON MICROSCOPY	3.7	76
266	6WD5\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)	ELECTRON MICROSCOPY	3.6	76
267	6WD2\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)	ELECTRON MICROSCOPY	3.6	76
268	6WD3\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)	ELECTRON MICROSCOPY	3.6	76
269	5UYL\|1\|Y	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	ELECTRON MICROSCOPY	3.6	76
270	6WD7\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)	ELECTRON MICROSCOPY	3.9	75
271	6WDA\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)	ELECTRON MICROSCOPY	3.8	76
272	6WD9\|1\|7	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)	ELECTRON MICROSCOPY	3.7	76
273	5UYM\|1\|Y	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	76
274	5AFI\|1\|y	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	76
275	5WE6\|1\|y	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	ELECTRON MICROSCOPY	3.4	76
276	5WFS\|1\|y	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	76
277	5WE4\|1\|y	70S ribosome-EF-Tu wt complex with GppNHp	ELECTRON MICROSCOPY	3.1	76
278	5WDT\|1\|y	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	76
279	5WF0\|1\|y	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)	ELECTRON MICROSCOPY	3.6	76
280	5WFK\|1\|y	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)	ELECTRON MICROSCOPY	3.4	76
281	5KPW\|1\|30	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	ELECTRON MICROSCOPY	3.9	76
282	5KPX\|1\|30	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	ELECTRON MICROSCOPY	3.9	76
283	5IQR\|1\|6	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	76
284	5UQ8\|1\|z	70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)	ELECTRON MICROSCOPY	3.2	76
285	1VY7\|1\|AY	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	5
286	1VY7\|1\|CY	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	5
287	4W2H\|1\|CY	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	5

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_19951.47 Obsolete

Release history

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