#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14LGT|1|E (rep)stem-loop of 23S rRNACrystal structure of the catalytic domain of RluB in complex with a 21-nucleotide RNA substrateX-ray diffraction1.32013-11-20
24LGT|1|Fstem-loop of 23S rRNACrystal structure of the catalytic domain of RluB in complex with a 21-nucleotide RNA substrateX-ray diffraction1.32013-11-20
33DH3|1|F+ 3DH3|1|Estem loop fragment of E. Coli 23S RNACrystal Structure of RluF in complex with a 22 nucleotide RNA substrateX-ray diffraction32009-04-28
43DH3|1|G+ 3DH3|1|Hstem loop fragment of E. Coli 23S RNACrystal Structure of RluF in complex with a 22 nucleotide RNA substrateX-ray diffraction32009-04-28

Release history

Release2.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.98
Date2016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_24235.1NR_4.0_07845.12.93(2) 3DH3|1|F+3DH3|1|E, 3DH3|1|G+3DH3|1|H(2) 4LGT|1|E, 4LGT|1|F(0)
NR_4.0_24235.1NR_4.0_10684.12.93(2) 4LGT|1|E, 4LGT|1|F(2) 3DH3|1|F+3DH3|1|E, 3DH3|1|G+3DH3|1|H(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_24235.1NR_4.0_51791.13.99(2) 3DH3|1|F+3DH3|1|E, 3DH3|1|G+3DH3|1|H(2) 4LGT|1|E, 4LGT|1|F(0)
NR_4.0_24235.1NR_4.0_86334.13.99(2) 4LGT|1|E, 4LGT|1|F(2) 3DH3|1|F+3DH3|1|E, 3DH3|1|G+3DH3|1|H(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
13DH3|1|F+ 3DH3|1|ECrystal Structure of RluF in complex with a 22 nucleotide RNA substrateX-RAY DIFFRACTION321
23DH3|1|G+ 3DH3|1|HCrystal Structure of RluF in complex with a 22 nucleotide RNA substrateX-RAY DIFFRACTION321
34LGT|1|FCrystal structure of the catalytic domain of RluB in complex with a 21-nucleotide RNA substrateX-RAY DIFFRACTION1.319
44LGT|1|ECrystal structure of the catalytic domain of RluB in complex with a 21-nucleotide RNA substrateX-RAY DIFFRACTION1.320

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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