#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16J6G|1|D (rep)U5 spliceosomal RNAACT1 pre-mRNA, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstromElectron microscopy3.22019-04-24
26BK8|1|5U5 spliceosomal RNARNA (34-MER), U5 snRNASaccharomyces cerevisiaeEukaryaRF00020S. cerevisiae spliceosomal post-catalytic P complexElectron microscopy3.32018-02-21
35GMK|1|DU5 spliceosomal RNA5'-Exon, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionElectron microscopy3.42016-08-17
45Y88|1|BU5 spliceosomal RNAU5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstromElectron microscopy3.462018-08-01
56EXN|1|5U5 spliceosomal RNALigated exons: UBC4 mRNA, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Post-catalytic P complex spliceosome with 3' splice site dockedElectron microscopy3.72018-01-17
65YLZ|1|BU5 spliceosomal RNAmRNA/intron lariat, U2 snRNA, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromElectron microscopy3.62018-07-18
76J6H|1|DU5 spliceosomal RNAACT1 pre-mRNA, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstromElectron microscopy3.62019-04-24
85LJ3|1|UU5 spliceosomal RNAExon 1 (5' exon) of UBC4 pre-mRNA, U5 snRNA (small nuclear RNA)Saccharomyces cerevisiaeEukaryaRF00020Structure of the core of the yeast spliceosome immediately after branchingElectron microscopy3.82016-08-03
95ZWM|1|BU5 spliceosomal RNAU5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)Electron microscopy3.42018-08-29
105GAN|1|UU5 spliceosomal RNAU5 snRNASaccharomyces cerevisiaeEukaryaRF00020The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromElectron microscopy3.72016-01-27
115MPS|1|5U5 spliceosomal RNAU5 snRNA, UBC4 gene exonSaccharomyces cerevisiaeEukaryaRF00020Structure of a spliceosome remodeled for exon ligationElectron microscopy3.852017-01-18
126J6N|1|DU5 spliceosomal RNAU5 snRNA, UBC4 pre-mRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstromElectron microscopy3.862019-04-24
136J6Q|1|DU5 spliceosomal RNAU5 snRNA, UBC4 pre-mRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstromElectron microscopy3.72019-04-24
145WSG|1|DU5 spliceosomal RNA5'-exon, U5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionElectron microscopy42017-01-25
155GAM|1|UU5 spliceosomal RNAU5 snRNASaccharomyces cerevisiaeEukaryaRF00020Foot region of the yeast spliceosomal U4/U6.U5 tri-snRNPElectron microscopy3.72016-02-03
165ZWO|1|BU5 spliceosomal RNAU5 snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstromElectron microscopy3.92018-08-29
173JCM|1|FU5 spliceosomal RNApre-mRNA, SNR6 snRNA, SNR7-L snRNASaccharomyces cerevisiaeEukaryaRF00020Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPElectron microscopy3.82016-02-24

Release history

Release3.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.98
Date2019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_30457.11NR_4.0_30457.103.71(13) 3JCM|1|F, 5GAM|1|U, 5GAN|1|U, 5GMK|1|D, 5LJ3|1|U, 5MPS|1|5, 5WSG|1|D, 5Y88|1|B, 5YLZ|1|B, 5ZWM|1|B, 5ZWO|1|B, 6BK8|1|5, 6EXN|1|5(4) 6J6G|1|D, 6J6H|1|D, 6J6N|1|D, 6J6Q|1|D(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
13JCM|1|FCryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.8113
25ZWM|1|BCryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)ELECTRON MICROSCOPY3.4175
35ZWO|1|BCryo-EM structure of the yeast B complex at average resolution of 3.9 angstromELECTRON MICROSCOPY3.9175
46EXN|1|5Post-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.7171
56J6H|1|DCryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstromELECTRON MICROSCOPY3.6179
66J6G|1|DCryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstromELECTRON MICROSCOPY3.2179
76J6N|1|DCryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstromELECTRON MICROSCOPY3.86179
86J6Q|1|DCryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstromELECTRON MICROSCOPY3.7179
96BK8|1|5S. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.3103
105YLZ|1|BCryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromELECTRON MICROSCOPY3.6117
115WSG|1|DCryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY4117
125GMK|1|DCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.4117
135Y88|1|BCryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstromELECTRON MICROSCOPY3.46117
145MPS|1|5Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.85141
155LJ3|1|UStructure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.8141
165GAN|1|UThe overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromELECTRON MICROSCOPY3.7141
175GAM|1|UFoot region of the yeast spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.7141

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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