#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12NVQ|1|R (rep)5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'synthetic constructRNA Polymerase II Elongation Complex in 150 mM Mg+2 with 2'dUTPX-ray diffraction2.92006-12-12
22NVX|1|R5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'RNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dUTPX-ray diffraction3.62006-12-19
32E2I|1|R5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'RNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dGTPX-ray diffraction3.412006-12-19
42E2H|1|R5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'RNA polymerase II elongation complex at 5 mM Mg2+ with GTPX-ray diffraction3.952006-12-12
51SFO|1|RRNA STRANDRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEXX-ray diffraction3.612004-03-02
61R9T|1|RRNA strandRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDEX-ray diffraction3.52004-11-16
72YU9|1|R5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'synthetic constructRNA polymerase II elongation complex in 150 mm MG+2 with UTPX-ray diffraction3.42007-04-24

Release history

Release3.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.36
Date2017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-24

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_34359.2NR_4.0_34359.13.0(7) 1R9T|1|R, 1SFO|1|R, 2E2H|1|R, 2E2I|1|R, 2NVQ|1|R, 2NVX|1|R, 2YU9|1|R(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_34359.2NR_4.0_34359.33.37(7) 1R9T|1|R, 1SFO|1|R, 2E2H|1|R, 2E2I|1|R, 2NVQ|1|R, 2NVX|1|R, 2YU9|1|R(0) (1) 6H67|1|R

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
11R9T|1|RRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDEX-RAY DIFFRACTION3.510
21SFO|1|RRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEXX-RAY DIFFRACTION3.6110
32NVX|1|RRNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dUTPX-RAY DIFFRACTION3.610
42E2I|1|RRNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dGTPX-RAY DIFFRACTION3.4110
52YU9|1|RRNA polymerase II elongation complex in 150 mm MG+2 with UTPX-RAY DIFFRACTION3.410
62NVQ|1|RRNA Polymerase II Elongation Complex in 150 mM Mg+2 with 2'dUTPX-RAY DIFFRACTION2.910
72E2H|1|RRNA polymerase II elongation complex at 5 mM Mg2+ with GTPX-RAY DIFFRACTION3.9510

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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