#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14TUD|1|QV (rep)Transfer RNAA-site ASL-SufJ, messenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
24V9S|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
34V9R|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
44TUA|1|QVTransfer RNAA-site ASL-Thr, messenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
54P70|1|XVTransfer RNAA site ASL of tRNA-Proline CGG (unmodified), mRNA, P-site tRNA fMETEscherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
64V5F|1|AVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
74V9S|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
84V9R|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
93JCE|1|8mRNA, tRNAsynthetic constructStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
104V7M|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
114V63|1|AYTransfer RNAmRNA, P and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
124V67|1|AYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
134V87|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
144V8F|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
154V9I|1|CVTransfer RNAmRNA, P-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
164V6A|1|CWTransfer RNARNA (5'-R(P*AP*AP*AP*UP*G)-3'), tRNA-MetEscherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
174V63|1|CYTransfer RNAmRNA, P and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
184V67|1|CYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
194V8C|1|DCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
204YZV|1|QVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
214TUB|1|QVTransfer RNAA-site tRNA Thr, messenger RNA, P-site tRNA f-MetEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
224TUB|1|XVTransfer RNAA-site tRNA Thr, messenger RNA, P-site tRNA f-MetEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
234TUD|1|XVTransfer RNAA-site ASL-SufJ, messenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
244V5F|1|CVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
254Z3S|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
265DOY|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
274V8B|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
284V67|1|AZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
294V63|1|AZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
304V8E|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
314V8Q|1|BVTransfer RNAE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
324V8B|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
334V6G|1|CCTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
344V8C|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
354V8J|1|CVTransfer RNAmessenger RNA, tRNA-fMet, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
364V63|1|CZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
374V67|1|CZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
384V8E|1|DCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
395D8B|1|EDTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
405D8B|1|FDTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
414TUC|1|QVTransfer RNAA-site ASL-SufJ, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
424P70|1|QVTransfer RNAA site ASL of tRNA-Proline CGG (unmodified), mRNA, P-site tRNA fMETEscherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
434LT8|1|QVTransfer RNAA-site ASL Pro, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
444LNT|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
454W4G|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
464P6F|1|XVTransfer RNAE-Site tRNA-Phe or A-Site tRNA-Phe, mRNA, tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
474LT8|1|XVTransfer RNAA-site ASL Pro, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
484YZV|1|XVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
495HCR|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
505HCP|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
515HCQ|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
524Y4P|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
534WRO|1|2KTransfer RNARNA (30-MER), tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
544Y4P|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
554Z8C|1|2xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
563CW5|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.12008-09-02
574W2I|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
584W2G|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
594W2F|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
601VY5|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
614W2H|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
624W2I|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
634W2G|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
644W2F|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
651VY5|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
664V5C|1|AVTransfer RNAMRNA, P-SITE TRNA FMETEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
675DOY|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
685IBB|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.962016-05-25
694Z3S|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
701VY6|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
711VY4|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
721VY7|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
731VY6|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
744WPO|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
754V8D|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
764V9I|1|AVTransfer RNAmRNA, P-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
774V6A|1|AWTransfer RNARNA (5'-R(P*AP*AP*AP*UP*G)-3'), tRNA-MetEscherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
784V87|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
794V7M|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), RNA (77-MER)Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
804LNT|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
814YPB|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
824P6F|1|QVTransfer RNAE-Site tRNA-Phe or A-Site tRNA-Phe, mRNA, tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
834TUC|1|XVTransfer RNAA-site ASL-SufJ, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
844YPB|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
854TUA|1|XVTransfer RNAA-site ASL-Thr, messenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
865HAU|1|1wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
874Z8C|1|1xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
885J4B|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
894ZER|1|1xTransfer RNAmRNA, tRNA metEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
905HD1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
915IB7|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.992016-05-25
925EL4|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.152016-01-27
934WQR|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
944WT1|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
954WSD|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
965EL6|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.12016-01-27
975EL7|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.152016-01-27
985IBB|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.962016-05-25
995HAU|1|2wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
1005J4C|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
1014ZER|1|2xTransfer RNAmRNA, tRNA metEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
1025HD1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
1035HCP|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
1045HCR|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
1055J4B|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
1065HCQ|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
1073CW6|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.32008-09-02
1084WQY|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
1094V8D|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
1104V97|1|CVTransfer RNAE-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA, P-SITE tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
1114LSK|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
1124L71|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
1134LEL|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
1141VVJ|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1154W4G|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1164LFZ|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
1174LFZ|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
1184LEL|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
1194LSK|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
1204L71|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
1211VVJ|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1224WR6|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
1234WPO|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
1244V6G|1|CBTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1255F8K|1|1xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1265J4C|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
1275EL5|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.152016-01-27
1284WQ1|1|2KTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
1295E7K|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.22016-01-27
1305IB8|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.132016-05-25
1314WQ1|1|2LTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
1324WSD|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1335EL6|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.12016-01-27
1345F8K|1|2xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1354W2H|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
1364WQY|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
1374V51|1|AVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1384V51|1|CVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1394V5F|1|CWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
1404WRA|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
1414WZO|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1425J4D|1|IATransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
1435J4D|1|NCTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
1444V6G|1|ACTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1454V5K|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1464V97|1|AVTransfer RNAE-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA, P-SITE tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
1474V7P|1|AWTransfer RNAmessenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3'), P-site tRNA-fMetEscherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1484V7L|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1495D8B|1|BDTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
1504V7P|1|DWTransfer RNAmessenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3'), P-site tRNA-fMetEscherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1515D8B|1|XCTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
1521VY4|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1531VY7|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
1544WZO|1|1KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1554WZO|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1565IB7|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.992016-05-25
1575E7K|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.22016-01-27
1585IB8|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.132016-05-25
1592FMT|1|CFORMYL-METHIONYL-TRNAFMET2synthetic constructMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.81999-07-29
1602FMT|1|DFORMYL-METHIONYL-TRNAFMET2synthetic constructMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.81999-07-29
1614V5C|1|CVTransfer RNAMRNA, P-SITE TRNA FMETEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
1624WRA|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
1633J9Y|1|vTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
1645AFI|1|vTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
1654V8F|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
1664V6G|1|CDTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1675EL4|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.152016-01-27
1684WRO|1|2LTransfer RNARNA (30-MER), tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1695IQR|1|5Transfer RNAmRNA, P-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
1705J4D|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
1715J4D|1|IBTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
1724V8J|1|AVTransfer RNAmessenger RNA, tRNA-fMet, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
1734V5K|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1745EL5|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.152016-01-27
1754WT1|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1764WQR|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
1775EL7|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.152016-01-27
1784YPB|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
1794W4G|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1804W4G|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1814YPB|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
1824WR6|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
1833JCJ|1|vTransfer RNAmessenger RNA, tRNAEscherichia coliBacteriaRF00005Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
1844V6G|1|ADTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1854V7L|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1864V5F|1|AWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
1874V8Q|1|BWTransfer RNAE-SITE or P-SITE TRNA FMETEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
1884V8O|1|AVTransfer RNAMRNA 5'-R(*AP*AP*AP*AP*AP*AP*UP*GP*UP)-3', PE HYBRID STATE TRNA FMETEscherichia coliBacteriaRF00005Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-ray diffraction3.82014-07-09
1894V8C|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
1904V8B|1|ADTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
1914V87|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
1924V8C|1|DDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
1934V87|1|BDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
1944V8B|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
1955AFI|1|wTransfer RNAP-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
1963QSY|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-ray diffraction3.22012-03-21
1974V5K|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1984V5K|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09

Release history

Release2.772.782.792.802.812.822.832.84
Date2016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_35542.21NR_all_35542.202.77(192) 1VVJ|1|QV, 1VVJ|1|XV, 1VY4|1|AX, 1VY4|1|CX, 1VY5|1|AX, 1VY5|1|CX, 1VY6|1|AX, 1VY6|1|CX, 1VY7|1|AX, 1VY7|1|CX, 2FMT|1|C, 2FMT|1|D, 3CW5|1|A, 3CW6|1|A, 3J9Y|1|v, 3JCE|1|8, 3JCJ|1|v, 3QSY|1|D, 4L71|1|QV, 4L71|1|XV, 4LEL|1|QV, 4LEL|1|XV, 4LFZ|1|QV, 4LFZ|1|XV, 4LNT|1|QV, 4LNT|1|XV, 4LSK|1|QV, 4LSK|1|XV, 4LT8|1|QV, 4LT8|1|XV, 4P6F|1|QV, 4P6F|1|XV, 4P70|1|QV, 4P70|1|XV, 4TUA|1|QV, 4TUA|1|XV, 4TUB|1|QV, 4TUB|1|XV, 4TUC|1|QV, 4TUC|1|XV, 4TUD|1|QV, 4TUD|1|XV, 4V51|1|AV, 4V51|1|CV, 4V5C|1|AV, 4V5C|1|CV, 4V5F|1|AV, 4V5F|1|AW, 4V5F|1|CV, 4V5F|1|CW, 4V5K|1|AV, 4V5K|1|AW, 4V5K|1|CV, 4V5K|1|CW, 4V63|1|AY, 4V63|1|AZ, 4V63|1|CY, 4V63|1|CZ, 4V67|1|AY, 4V67|1|AZ, 4V67|1|CY, 4V67|1|CZ, 4V6A|1|AW, 4V6A|1|CW, 4V6G|1|AC, 4V6G|1|AD, 4V6G|1|CB, 4V6G|1|CC, 4V6G|1|CD, 4V7L|1|AX, 4V7L|1|CX, 4V7M|1|AX, 4V7M|1|CX, 4V7P|1|AW, 4V7P|1|DW, 4V87|1|BC, 4V87|1|BD, 4V87|1|CC, 4V87|1|CD, 4V8B|1|AC, 4V8B|1|AD, 4V8B|1|CC, 4V8B|1|CD, 4V8C|1|CC, 4V8C|1|CD, 4V8C|1|DC, 4V8C|1|DD, 4V8D|1|AC, 4V8D|1|CC, 4V8E|1|BC, 4V8E|1|DC, 4V8F|1|BC, 4V8F|1|CC, 4V8J|1|AV, 4V8J|1|CV, 4V8O|1|AV, 4V8Q|1|BV, 4V8Q|1|BW, 4V97|1|AV, 4V97|1|CV, 4V9I|1|AV, 4V9I|1|CV, 4V9R|1|AX, 4V9R|1|CX, 4V9S|1|AX, 4V9S|1|CX, 4W2F|1|AX, 4W2F|1|CX, 4W2G|1|AX, 4W2G|1|CX, 4W2H|1|AX, 4W2H|1|CX, 4W2I|1|AX, 4W2I|1|CX, 4W4G|1|QV, 4W4G|1|QW, 4W4G|1|XV, 4W4G|1|XW, 4WPO|1|BX, 4WPO|1|DX, 4WQ1|1|2K, 4WQ1|1|2L, 4WQR|1|2K, 4WQR|1|2L, 4WQY|1|BX, 4WQY|1|DX, 4WR6|1|2K, 4WR6|1|2L, 4WRA|1|2K, 4WRA|1|2L, 4WRO|1|2K, 4WRO|1|2L, 4WSD|1|2K, 4WSD|1|2L, 4WT1|1|2K, 4WT1|1|2L, 4WZO|1|1K, 4WZO|1|2K, 4WZO|1|2L, 4Y4P|1|1x, 4Y4P|1|2x, 4YPB|1|QV, 4YPB|1|QW, 4YPB|1|XV, 4YPB|1|XW, 4YZV|1|QV, 4YZV|1|XV, 4Z3S|1|1x, 4Z3S|1|2x, 4Z8C|1|1x, 4Z8C|1|2x, 4ZER|1|1x, 4ZER|1|2x, 5AFI|1|v, 5AFI|1|w, 5D8B|1|BD, 5D8B|1|ED, 5D8B|1|FD, 5D8B|1|XC, 5DOY|1|1x, 5DOY|1|2x, 5E7K|1|2K, 5E7K|1|2L, 5EL4|1|2K, 5EL4|1|2L, 5EL5|1|2K, 5EL5|1|2L, 5EL6|1|2K, 5EL6|1|2L, 5EL7|1|2K, 5EL7|1|2L, 5F8K|1|1x, 5F8K|1|2x, 5HAU|1|1w, 5HAU|1|2w, 5HCP|1|1x, 5HCP|1|2x, 5HCQ|1|1x, 5HCQ|1|2x, 5HCR|1|1x, 5HCR|1|2x, 5HD1|1|1x, 5HD1|1|2x, 5IQR|1|5, 5J4B|1|1x, 5J4B|1|2x, 5J4C|1|1x, 5J4C|1|2x, 5J4D|1|D, 5J4D|1|IA, 5J4D|1|IB, 5J4D|1|NC(6) 5IB7|1|2K, 5IB7|1|2L, 5IB8|1|2K, 5IB8|1|2L, 5IBB|1|2K, 5IBB|1|2L(34) 1EG0|1|O, 3DEG|1|B, 3J5S|1|E, 3J77|1|PT, 3J78|1|ET, 3J78|1|PT, 3JBN|1|7, 3JBO|1|7, 3JCN|1|v, 3V11|1|D, 4V4X|1|AC, 4V4Z|1|AC, 4V69|1|AV, 4V6N|1|BD, 4V6O|1|AD, 4V6P|1|AD, 4V6Q|1|AD, 4V6R|1|AD, 4V6S|1|BC, 4V6T|1|AX, 4V6V|1|A3, 4V6Y|1|A3, 4V6Z|1|A3, 4V70|1|A3, 4V71|1|A3, 4V72|1|A3, 4V73|1|A3, 4V74|1|A3, 4V75|1|A3, 4V76|1|A3, 4V77|1|A3, 4V78|1|A3, 4V79|1|A3, 4V7B|1|AV

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
13QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277
23JCJ|1|vStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.773
32FMT|1|CMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
42FMT|1|DMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
53CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.372
63CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.172
75AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
84V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
94V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
104V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
114V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
124V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
134V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
144V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
155EL5|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1572
165E7K|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.272
175EL6|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.172
185EL7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1572
194WZO|1|2KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.372
204WQ1|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
214WR6|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0572
224WQR|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
234V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
244V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
254V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
264WRA|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
275IBB|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9672
284WQ1|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
294WQR|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
304WT1|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
314WRO|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
324WR6|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0571
334WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
344V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
355IB7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9972
365IB8|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1372
375EL4|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1572
385EL5|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1572
394V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
404V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
414WRA|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
425EL7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1572
435EL4|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1571
444WRO|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
454WT1|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
464WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
475IBB|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9671
485EL6|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.172
495E7K|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.272
505IB7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9972
515IB8|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1372
524WZO|1|2LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.373
535AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
543J9Y|1|vCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.973
555HCP|1|2xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8972
564Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
575HCQ|1|2xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
585HCR|1|2xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
595HD1|1|2xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.772
605HD1|1|1xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.772
615HCR|1|1xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
625HCP|1|1xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8972
635HCQ|1|1xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
644Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
655HAU|1|2wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION372
665HAU|1|1wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION372
675DOY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.671
684W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
694Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
704V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
714V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
724WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
734WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
741VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
751VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
764W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
771VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
781VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
794W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
805J4B|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
815J4C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
824Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
834W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
844ZER|1|1xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
855F8K|1|1xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
865J4D|1|IAE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
875J4D|1|NCE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
885F8K|1|2xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
894ZER|1|2xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
904V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
914V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
924V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
934V5F|1|AVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
944V5F|1|CVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
954V8J|1|CVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
964V97|1|CVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
974V97|1|AVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
984V8J|1|AVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
994P70|1|XVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
1004TUD|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1014P6F|1|QVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
1024LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
1034LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
1041VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
1054LFZ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
1064L71|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
1071VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
1084LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
1094L71|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
1104LFZ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
1114LEL|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
1124LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
1134LEL|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
1144LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
1154LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
1164P6F|1|XVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
1174YZV|1|QVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
1184W4G|1|QVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1194YPB|1|QVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1204V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1215D8B|1|FDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1225D8B|1|EDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1233JCE|1|8Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.277
1244V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
1254V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
1264V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
1274V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
1284V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
1294V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
1304V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
1314V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
1324TUA|1|QVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1334P70|1|QVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
1344TUD|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1354TUA|1|XVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1364TUC|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1374TUB|1|QVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1384YZV|1|XVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
1394YPB|1|XVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1404W4G|1|XVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1414V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1424V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1434V7P|1|AWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1444V7P|1|DWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1454V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1464V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1474V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1484V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1494V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
1504TUC|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1514TUB|1|XVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1521VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
1535DOY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.671
1544W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
1554W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
1564V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
1574V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
1584Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
1594W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
1604W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
1615J4C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
1625J4B|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
1634Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
1641VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
1651VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
1661VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
1674WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
1684WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
1694V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1705IQR|1|5Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY372
1714WZO|1|1KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.368
1724V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
1734V5F|1|AWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1744V5F|1|CWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1754W4G|1|QWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1764YPB|1|QWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1774YPB|1|XWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1784W4G|1|XWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1794V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1804V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1814V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1825D8B|1|BDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1835D8B|1|XCCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1844V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1854V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1864V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1875J4D|1|IBE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
1885J4D|1|DE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
1894V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1904V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1914V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1924V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1934V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1944V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1954V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1964V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1974V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1984V8O|1|AVCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.877

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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