#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16TPQ|1|U (rep)Large subunit ribosomal RNApre-23S rRNABacillus subtilisBacteriaRF02541RNase M5 bound to 50S ribosome with precursor 5S rRNAElectron microscopy3.072020-09-30
27AQD|1|ALarge subunit ribosomal RNA23S ribosomal RNABacillus subtilis subsp. subtilis str. 168BacteriaRF02541Structure of the bacterial RQC complex (Translocating State)Electron microscopy3.12020-11-25
37AQC|1|ALarge subunit ribosomal RNA23S ribosomal RNABacillus subtilis subsp. subtilis str. 168BacteriaRF02541Structure of the bacterial RQC complex (Decoding State)Electron microscopy2.992020-11-25
46TNN|1|ULarge subunit ribosomal RNApre-23S rRNABacillus subtilisBacteriaRF02541Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNAElectron microscopy3.072020-09-30
56HA1|1|ALarge subunit ribosomal RNA23S ribosomal RNABacillus subtilisBacteriaRF02541Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinElectron microscopy3.12018-08-29
66HA8|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilisBacteriaRF02541Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeElectron microscopy3.52018-08-29
75NJT|1|ULarge subunit ribosomal RNA23S ribosomal RNABacillus subtilisBacteriaRF02541Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.Electron microscopy3.82017-06-14
83J9W|1|BALarge subunit ribosomal RNA23S ribosomal RNABacillus subtilisBacteriaRF02541Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexElectron microscopy3.92015-04-29
96PPF|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilisBacteriaRF02541Bacterial 45SRbgA ribosomal particle class BElectron microscopy3.42019-09-18
106PVK|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilisBacteriaRF02541Bacterial 45SRbgA ribosomal particle class AElectron microscopy3.42019-09-18

Release history

Release3.1543.155
Date2020-11-252020-12-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_41610.8NR_4.0_41610.73.154(8) 3J9W|1|BA, 5NJT|1|U, 6HA1|1|A, 6HA8|1|A, 6PPF|1|A, 6PVK|1|A, 6TNN|1|U, 6TPQ|1|U(2) 7AQC|1|A, 7AQD|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_41610.8NR_4.0_41610.93.156(10) 3J9W|1|BA, 5NJT|1|U, 6HA1|1|A, 6HA8|1|A, 6PPF|1|A, 6PVK|1|A, 6TNN|1|U, 6TPQ|1|U, 7AQC|1|A, 7AQD|1|A(0) (1) 7AS8|1|A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16PVK|1|ABacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42169
26PPF|1|ABacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42471
36TPQ|1|URNase M5 bound to 50S ribosome with precursor 5S rRNAELECTRON MICROSCOPY3.072924
46TNN|1|UMini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNAELECTRON MICROSCOPY3.072930
57AQC|1|AStructure of the bacterial RQC complex (Decoding State)ELECTRON MICROSCOPY2.992820
67AQD|1|AStructure of the bacterial RQC complex (Translocating State)ELECTRON MICROSCOPY3.12918
73J9W|1|BACryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92923
85NJT|1|UStructure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82923
96HA8|1|ACryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52887
106HA1|1|ACryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12887

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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