#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14V8C|1|AB (rep)5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
24WU1|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-siteX-ray diffraction3.22015-06-10
34V8E|1|CB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
44Z3S|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
54Y4P|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
64WQF|1|AB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
74WQY|1|AB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
84V9R|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
94W2G|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
104V9S|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
111VY4|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
124TUE|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of ASL-SufJ bound to Codon ACC-U on the RibosomeX-ray diffraction3.52015-05-13
134P6F|1|YB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
144LT8|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
154TUC|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
164TUE|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of ASL-SufJ bound to Codon ACC-U on the RibosomeX-ray diffraction3.52015-05-13
174WZD|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with cognate tRNA-Tyr in the P-siteX-ray diffraction3.12015-06-10
184WQ1|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
194WRO|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
204WQ1|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
214V87|1|AB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
224V6F|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
234ZER|1|1B5S ribosomal RNA5s ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
244WPO|1|AB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
251VY7|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
261VY6|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
274V8H|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of HPF bound to the 70S ribosome.X-ray diffraction3.12014-07-09
284W2H|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
294TUB|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
304TUD|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
314L71|1|RB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
324L47|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-ray diffraction3.222014-08-06
334TUB|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
344TUD|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
354V5P|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
364V5P|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
374WSD|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
384V8E|1|AB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
394V8D|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
404V8C|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
414V8B|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
424V8D|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
434Y4O|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.32015-03-18
444ZER|1|2B5S ribosomal RNA5s ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
454Z3S|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
464WQU|1|AB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
474W2E|1|B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92014-10-01
484W2I|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
494W2F|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
504V95|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YAEJ bound to the 70S ribosomeX-ray diffraction3.22014-07-09
511VY5|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
524WQY|1|CB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
534WPO|1|CB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
544V9R|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
554L47|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-ray diffraction3.222014-08-06
564P6F|1|RB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
574LT8|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
584LNT|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
594P70|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
604TUA|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
614LNT|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
625D8B|1|AD5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
634V9I|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
644V8J|1|BB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
654V5C|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
664WT8|1|Cs5S ribosomal RNA5S rRNA (119-MER)Thermus thermophilusBacteriaRF00001Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-ray diffraction3.42015-01-21
674V5C|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
684V9M|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction42014-07-09
695D8B|1|WC5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
704WRA|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
714WSM|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-ray diffraction3.32015-06-10
724V8F|1|AB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
734V87|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
744Z8C|1|1B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
754Y4O|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.32015-03-18
764W2H|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
774WQU|1|CB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
784WQF|1|CB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
794V6G|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
804V8H|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of HPF bound to the 70S ribosome.X-ray diffraction3.12014-07-09
814V9S|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
824TUA|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
834P70|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
844LFZ|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
854L71|1|YB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
864LEL|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
874V9Q|1|AB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.X-ray diffraction3.42014-07-09
884V5E|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.452014-07-09
894V9Q|1|CB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.X-ray diffraction3.42014-07-09
904V97|1|DB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
914V5E|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.452014-07-09
924V9I|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
934V8J|1|DB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
944WT8|1|Ds5S ribosomal RNA5S rRNA (119-MER)Thermus thermophilusBacteriaRF00001Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-ray diffraction3.42015-01-21
954WT1|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
964WQR|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
974WR6|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
984WSM|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-ray diffraction3.32015-06-10
994V9A|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of the 70S ribosome with tetracycline.X-ray diffraction3.32014-07-09
1004V8F|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
1014V8B|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
1024V8I|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YfiA bound to the 70S ribosome.X-ray diffraction2.72014-07-09
1031VY5|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
1044W2G|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
1054W2I|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
1064LEL|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
1074TUC|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
1084LSK|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
1094V67|1|BB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
1104V6A|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
1114V83|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.X-ray diffraction3.52014-07-09
1124V9K|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.52014-07-09
1134V6A|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
1144V83|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.X-ray diffraction3.52014-07-09
1154V9L|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.52014-07-09
1164V5D|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
1174V67|1|DB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
1184WZO|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1194WRA|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
1204V8G|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of RMF bound to the 70S ribosome.X-ray diffraction32014-07-09
1214V8I|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YfiA bound to the 70S ribosome.X-ray diffraction2.72014-07-09
1221VVJ|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1234LSK|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
1244LFZ|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
1254V5D|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
1264V8U|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-ray diffraction3.72014-07-09
1274V5R|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
1284V9N|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-ray diffraction3.42014-07-09
1294V97|1|BB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
1304V7X|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with erythromycin.X-ray diffraction32014-07-09
1314V5J|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.12014-07-09
1324V5F|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
1334V63|1|DB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
1344V8U|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-ray diffraction3.72014-07-09
1354V5F|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
1364V5J|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.12014-07-09
1374V5R|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
1384V9N|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-ray diffraction3.42014-07-09
1394WZD|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with cognate tRNA-Tyr in the P-siteX-ray diffraction3.12015-06-10
1404Z8C|1|2B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
1414V8A|1|AB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.X-ray diffraction3.22014-07-09
1424V8A|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.X-ray diffraction3.22014-07-09
1434V8G|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of RMF bound to the 70S ribosome.X-ray diffraction32014-07-09
1444V95|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YAEJ bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1454W2F|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
1464V7L|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1474V5Q|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
1484V7M|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
1494V9L|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.52014-07-09
1504V9H|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-ray diffraction2.862014-07-09
1514V7P|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1524V63|1|BB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
1534V9M|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction42014-07-09
1544V7Y|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-ray diffraction32014-07-09
1554V7P|1|CB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1564V7Y|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-ray diffraction32014-07-09
1574V7X|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with erythromycin.X-ray diffraction32014-07-09
1584V9K|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.52014-07-09
1594V84|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.X-ray diffraction3.42014-07-09
1604WR6|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
1614V9B|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of the 70S ribosome with tigecycline.X-ray diffraction3.12014-07-09
1624V9A|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of the 70S ribosome with tetracycline.X-ray diffraction3.32014-07-09
1634V9B|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of the 70S ribosome with tigecycline.X-ray diffraction3.12014-07-09
1641VY4|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1651VVJ|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1664V7J|1|AB5S ribosomal RNARNA (119-MER)Thermus thermophilusBacteriaRF00001Structure of RelE nuclease bound to the 70S ribosome (precleavage state)X-ray diffraction3.32014-07-09
1674V51|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1684V90|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Thermus thermophilus RibosomeX-ray diffraction2.952014-07-09
1694V84|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.X-ray diffraction3.42014-07-09
1704V7W|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-ray diffraction32014-07-09
1714V7J|1|BB5S ribosomal RNARNA (119-MER)Thermus thermophilusBacteriaRF00001Structure of RelE nuclease bound to the 70S ribosome (precleavage state)X-ray diffraction3.32014-07-09
1724V51|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1734V5Q|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
1744V7W|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-ray diffraction32014-07-09
1754WQR|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
1764WSD|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1774WU1|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-siteX-ray diffraction3.22015-06-10
1784V6F|1|AB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
1794V4J|1|x5S ribosomal RNA5S LARGE SUBUNIT RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.X-ray diffraction3.832014-07-09
1804V7L|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1814V8N|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.X-ray diffraction3.12014-07-09
1824W29|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-ray diffraction3.82014-10-01
1834V8N|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.X-ray diffraction3.12014-07-09
1841VY6|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
1851VY7|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
1864XEJ|1|A5S5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001IRES bound to bacterial RibosomeX-ray diffraction3.82015-02-25
1874V8Q|1|AB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
1884V7K|1|AB5S ribosomal RNARNA (119-MER)Thermus thermophilusBacteriaRF00001Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-ray diffraction3.62014-07-09
1894V7K|1|BB5S ribosomal RNARNA (119-MER)Thermus thermophilusBacteriaRF00001Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-ray diffraction3.62014-07-09
1904V5S|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
1914V9J|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.862014-07-09
1924V5S|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
1934WZO|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1944Y4P|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
1954XEJ|1|B5S5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001IRES bound to bacterial RibosomeX-ray diffraction3.82015-02-25
1964V5K|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1974V8X|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of Thermus thermophilus ribosomeX-ray diffraction3.352014-07-09
1984V5K|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1994V8X|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of Thermus thermophilus ribosomeX-ray diffraction3.352014-07-09
2004V9J|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.862014-07-09
2014V5A|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
2024V6G|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
2034V4I|1|x5S ribosomal RNA5S LARGE SUBUNIT RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.X-ray diffraction3.712014-07-09
2044WT1|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
2054V5G|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-ray diffraction3.62014-07-09
2064V5A|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
2074WRO|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
2084V5G|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-ray diffraction3.62014-07-09
2094V8O|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-ray diffraction3.82014-07-09
2104V5L|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-ray diffraction3.12014-07-09
2114W29|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-ray diffraction3.82014-10-01
2124V7Z|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.X-ray diffraction3.12014-07-09
2134V7Z|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.X-ray diffraction3.12014-07-09
2144V7M|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09

Release history

Release2.45
Date2015-10-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_42622.10NR_all_42622.92.45(212) 1VVJ|1|RB, 1VVJ|1|YB, 1VY4|1|BB, 1VY4|1|DB, 1VY5|1|BB, 1VY5|1|DB, 1VY6|1|BB, 1VY6|1|DB, 1VY7|1|BB, 1VY7|1|DB, 4L47|1|RB, 4L47|1|YB, 4L71|1|RB, 4L71|1|YB, 4LEL|1|RB, 4LEL|1|YB, 4LFZ|1|RB, 4LFZ|1|YB, 4LNT|1|RB, 4LNT|1|YB, 4LSK|1|RB, 4LSK|1|YB, 4LT8|1|RB, 4LT8|1|YB, 4P6F|1|RB, 4P6F|1|YB, 4P70|1|RB, 4P70|1|YB, 4TUA|1|RB, 4TUA|1|YB, 4TUB|1|RB, 4TUB|1|YB, 4TUC|1|RB, 4TUC|1|YB, 4TUD|1|RB, 4TUD|1|YB, 4TUE|1|RB, 4TUE|1|YB, 4V4I|1|x, 4V4J|1|x, 4V51|1|BB, 4V51|1|DB, 4V5A|1|BB, 4V5A|1|DB, 4V5C|1|BB, 4V5C|1|DB, 4V5D|1|BB, 4V5D|1|DB, 4V5E|1|BB, 4V5E|1|DB, 4V5F|1|BB, 4V5F|1|DB, 4V5G|1|BB, 4V5G|1|DB, 4V5J|1|BB, 4V5J|1|DB, 4V5K|1|BB, 4V5K|1|DB, 4V5L|1|BB, 4V5P|1|BB, 4V5P|1|DB, 4V5Q|1|BB, 4V5Q|1|DB, 4V5R|1|BB, 4V5R|1|DB, 4V5S|1|BB, 4V5S|1|DB, 4V63|1|BB, 4V63|1|DB, 4V67|1|BB, 4V67|1|DB, 4V6A|1|BB, 4V6A|1|DB, 4V6F|1|AB, 4V6F|1|DB, 4V6G|1|BB, 4V6G|1|DB, 4V7J|1|AB, 4V7J|1|BB, 4V7K|1|AB, 4V7K|1|BB, 4V7L|1|BB, 4V7L|1|DB, 4V7M|1|BB, 4V7M|1|DB, 4V7P|1|BB, 4V7P|1|CB, 4V7W|1|BB, 4V7W|1|DB, 4V7X|1|BB, 4V7X|1|DB, 4V7Y|1|BB, 4V7Y|1|DB, 4V7Z|1|BB, 4V7Z|1|DB, 4V83|1|BB, 4V83|1|DB, 4V84|1|BB, 4V84|1|DB, 4V87|1|AB, 4V87|1|DB, 4V8A|1|AB, 4V8A|1|BB, 4V8B|1|BB, 4V8B|1|DB, 4V8C|1|AB, 4V8C|1|BB, 4V8D|1|BB, 4V8D|1|DB, 4V8E|1|AB, 4V8E|1|CB, 4V8F|1|AB, 4V8F|1|DB, 4V8G|1|BB, 4V8G|1|DB, 4V8H|1|BB, 4V8H|1|DB, 4V8I|1|BB, 4V8I|1|DB, 4V8J|1|BB, 4V8J|1|DB, 4V8N|1|BB, 4V8N|1|DB, 4V8O|1|BB, 4V8Q|1|AB, 4V8U|1|BB, 4V8U|1|DB, 4V8X|1|BB, 4V8X|1|DB, 4V90|1|BB, 4V95|1|BB, 4V95|1|DB, 4V97|1|BB, 4V97|1|DB, 4V9A|1|BB, 4V9A|1|DB, 4V9B|1|BB, 4V9B|1|DB, 4V9H|1|BB, 4V9I|1|BB, 4V9I|1|DB, 4V9J|1|BB, 4V9J|1|DB, 4V9K|1|BB, 4V9K|1|DB, 4V9L|1|BB, 4V9L|1|DB, 4V9M|1|BB, 4V9M|1|DB, 4V9N|1|BB, 4V9N|1|DB, 4V9Q|1|AB, 4V9Q|1|CB, 4V9R|1|BB, 4V9R|1|DB, 4V9S|1|BB, 4V9S|1|DB, 4W29|1|BB, 4W29|1|DB, 4W2E|1|B, 4W2F|1|BB, 4W2F|1|DB, 4W2G|1|BB, 4W2G|1|DB, 4W2H|1|BB, 4W2H|1|DB, 4W2I|1|BB, 4W2I|1|DB, 4WPO|1|AB, 4WPO|1|CB, 4WQ1|1|16, 4WQ1|1|1J, 4WQF|1|AB, 4WQF|1|CB, 4WQR|1|16, 4WQR|1|1J, 4WQU|1|AB, 4WQU|1|CB, 4WQY|1|AB, 4WQY|1|CB, 4WR6|1|16, 4WR6|1|1J, 4WRA|1|16, 4WRA|1|1J, 4WRO|1|16, 4WRO|1|1J, 4WSD|1|16, 4WSD|1|1J, 4WSM|1|16, 4WSM|1|1J, 4WT1|1|16, 4WT1|1|1J, 4WT8|1|Cs, 4WT8|1|Ds, 4WU1|1|16, 4WU1|1|1J, 4WZD|1|16, 4WZD|1|1J, 4WZO|1|16, 4WZO|1|1J, 4XEJ|1|A5S, 4XEJ|1|B5S, 4Y4O|1|1B, 4Y4O|1|2B, 4Y4P|1|1B, 4Y4P|1|2B, 4Z3S|1|1B, 4Z3S|1|2B, 4Z8C|1|1B, 4Z8C|1|2B, 4ZER|1|1B, 4ZER|1|2B(2) 5D8B|1|AD, 5D8B|1|WC(11) 4V42|1|BB, 4V4P|1|AB, 4V4R|1|BB, 4V4S|1|BB, 4V4T|1|BB, 4V4X|1|BB, 4V4Y|1|BB, 4V4Z|1|BB, 4V5M|1|BB, 4V5N|1|BB, 4V68|1|BB

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14V4I|1|xCrystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.X-RAY DIFFRACTION3.71120
24V4J|1|xInteractions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.X-RAY DIFFRACTION3.83120
34V7M|1|DBThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.45119
44V9H|1|BBCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.86119
54WZD|1|1JComplex of 70S ribosome with cognate tRNA-Tyr in the P-siteX-RAY DIFFRACTION3.1122
64WU1|1|1JComplex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-siteX-RAY DIFFRACTION3.2122
74V9B|1|DBCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.1122
84V9A|1|DBCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.3122
94WZO|1|1JComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.3122
104WT1|1|1JComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.05122
114WRO|1|1JComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.05122
124WSD|1|1JComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.95122
134WQR|1|1JComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.15122
144WRA|1|1JComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.05122
154WSM|1|1JComplex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-RAY DIFFRACTION3.3122
164WR6|1|1JComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.05122
174WQ1|1|1JComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1122
184V87|1|DBCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.1122
194V8C|1|BBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.3122
204V8B|1|DBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION3122
214V8E|1|CBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.3122
224V8F|1|DBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.3122
234V8D|1|DBStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION3122
244V6F|1|ABElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.1122
254V7L|1|DBThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION3118
264V5C|1|BBStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.3119
274V5C|1|DBStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.3119
284V8J|1|BBCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.9119
294V7L|1|BBThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION3118
304V6A|1|DBStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.1119
314V6A|1|BBStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.1119
324V7M|1|BBThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.45119
334V8J|1|DBCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.9119
344V97|1|DBCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.52119
354V97|1|BBCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.52119
364V5E|1|BBInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.45119
374V5E|1|DBInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.45119
381VY7|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.8120
391VY6|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.9120
401VY4|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.6120
414Y4P|1|2BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.5120
424WQU|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.8120
434Z8C|1|2BCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.9120
444V95|1|DBCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.2120
454W2H|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.7120
464V9S|1|DBCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.1120
474V9R|1|DBCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION3120
481VY5|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.55120
494W2G|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.55120
504W2F|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
514Z3S|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.65120
524W2I|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.7120
534Y4O|1|2BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.3120
544ZER|1|2BCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.1120
554WPO|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.8120
564WQY|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.8120
574WQF|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.8120
584W2E|1|BCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.9120
594V95|1|BBCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.2120
604V8I|1|BBCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.7120
614V8I|1|DBCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.7120
624V8A|1|ABThe structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.X-RAY DIFFRACTION3.2120
634V8A|1|BBThe structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.X-RAY DIFFRACTION3.2120
644V8G|1|BBCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION3120
654V8G|1|DBCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION3120
664V8H|1|BBCrystal structure of HPF bound to the 70S ribosome.X-RAY DIFFRACTION3.1120
674V8H|1|DBCrystal structure of HPF bound to the 70S ribosome.X-RAY DIFFRACTION3.1120
684Y4O|1|1BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.3120
694WQF|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.8120
704WQY|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.8120
714WPO|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.8120
724WQU|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.8120
734ZER|1|1BCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.1120
744V9S|1|BBCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.1120
754V9R|1|BBCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION3120
764Z8C|1|1BCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.9120
771VY6|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.9120
784Z3S|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.65120
794W2G|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.55120
804W2F|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
814Y4P|1|1BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.5120
821VY5|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.55120
831VY4|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.6120
844W2H|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.7120
851VY7|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.8120
864W2I|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.7120
874WQ1|1|16Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1122
884WR6|1|16Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.05122
894WU1|1|16Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-siteX-RAY DIFFRACTION3.2122
904WZD|1|16Complex of 70S ribosome with cognate tRNA-Tyr in the P-siteX-RAY DIFFRACTION3.1122
914V9B|1|BBCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.1122
924V9A|1|BBCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.3122
934WZO|1|16Complex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.3122
944WRO|1|16Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.05122
954WSD|1|16Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.95122
964WQR|1|16Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.15122
974WT1|1|16Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.05122
984WRA|1|16Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.05122
994V8F|1|ABCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.3122
1004V8E|1|ABCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.3122
1014V8D|1|BBStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION3122
1024V87|1|ABCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.1122
1034V8C|1|ABCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.3122
1044V8B|1|BBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION3122
1054LT8|1|YBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.14120
1064LNT|1|YBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.94120
1074TUA|1|YBCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.6120
1084TUC|1|YBCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.6120
1094TUD|1|YBCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.6120
1104TUE|1|YBCrystal structure of ASL-SufJ bound to Codon ACC-U on the RibosomeX-RAY DIFFRACTION3.5120
1114P6F|1|YBCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.6120
1124TUB|1|YBCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.6120
1134P70|1|YBCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.68120
1144L71|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.9120
1154L47|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.22120
1164LSK|1|YBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.48120
1174LEL|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.9120
1184LFZ|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.92120
1191VVJ|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.44120
1204V6F|1|DBElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.1122
1214V6G|1|DBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.5120
1224V6G|1|BBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.5120
1231VVJ|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.44120
1244LT8|1|RBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.14120
1254L47|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.22120
1264L71|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.9120
1274LSK|1|RBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.48120
1284LEL|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.9120
1294LFZ|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.92120
1304P70|1|RBCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.68120
1314LNT|1|RBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.94120
1324P6F|1|RBCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.6120
1334TUE|1|RBCrystal structure of ASL-SufJ bound to Codon ACC-U on the RibosomeX-RAY DIFFRACTION3.5120
1344TUD|1|RBCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.6120
1354TUC|1|RBCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.6120
1364TUA|1|RBCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.6120
1374TUB|1|RBCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.6120
1384WSM|1|16Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-RAY DIFFRACTION3.3122
1394V90|1|BBThermus thermophilus RibosomeX-RAY DIFFRACTION2.95119
1404V5P|1|DBThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.1119
1414V5P|1|BBThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.1119
1424V5Q|1|DBThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.1119
1434V5Q|1|BBThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.1119
1444V5R|1|DBThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.1119
1454V5R|1|BBThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.1119
1464V5S|1|DBThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.1119
1474V5S|1|BBThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.1119
1484V8Q|1|ABComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.1119
1494V8O|1|BBCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.8119
1504V5L|1|BBThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.1119
1514V5G|1|BBThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.6119
1524V5G|1|DBThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.6119
1534V8U|1|DBCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.7119
1544V8U|1|BBCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.7119
1554V5F|1|BBThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.6119
1564V5F|1|DBThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.6119
1574WT8|1|DsCrystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.4119
1584WT8|1|CsCrystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.4119
1594V9I|1|DBCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.3119
1604V9I|1|BBCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.3119
1614V5J|1|DBStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.1119
1624V5J|1|BBStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.1119
1634V7Y|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION3119
1644V7Y|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION3119
1654V7X|1|BBStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION3119
1664V7X|1|DBStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION3119
1674V7W|1|DBStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION3119
1684V7W|1|BBStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION3119
1694V5D|1|BBStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.5119
1704V5D|1|DBStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.5119
1714V8N|1|BBThe crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.X-RAY DIFFRACTION3.1119
1724V8N|1|DBThe crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.X-RAY DIFFRACTION3.1119
1734V7J|1|ABStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.3119
1744V7J|1|BBStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.3119
1754V7K|1|ABStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.6119
1764V7K|1|BBStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.6119
1774V8X|1|DBStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.35119
1784V8X|1|BBStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.35119
1794V5K|1|DBStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.2119
1804V5K|1|BBStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.2119
1814V5A|1|DBStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.5119
1824V5A|1|BBStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.5119
1834V51|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.8119
1844V51|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.8119
1854V7Z|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with telithromycin.X-RAY DIFFRACTION3.1119
1864V7Z|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with telithromycin.X-RAY DIFFRACTION3.1119
1874V9Q|1|CBCrystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.X-RAY DIFFRACTION3.4119
1884V9Q|1|ABCrystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.X-RAY DIFFRACTION3.4119
1894V9N|1|DBCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.4119
1904V9N|1|BBCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.4119
1915D8B|1|ADCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.63119
1925D8B|1|WCCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.63119
1934V67|1|BBCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION3119
1944V67|1|DBCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION3119
1954XEJ|1|A5SIRES bound to bacterial RibosomeX-RAY DIFFRACTION3.8119
1964XEJ|1|B5SIRES bound to bacterial RibosomeX-RAY DIFFRACTION3.8119
1974V63|1|DBStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.21119
1984V63|1|BBStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.21119
1994V7P|1|CBRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.62119
2004V7P|1|BBRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.62119
2014V83|1|BBCrystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.X-RAY DIFFRACTION3.5119
2024V83|1|DBCrystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.X-RAY DIFFRACTION3.5119
2034V84|1|DBCrystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.X-RAY DIFFRACTION3.4119
2044V84|1|BBCrystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.X-RAY DIFFRACTION3.4119
2054V9J|1|DB70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.86119
2064V9J|1|BB70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.86119
2074V9M|1|DB70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION4119
2084V9L|1|DB70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.5119
2094V9M|1|BB70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION4119
2104V9L|1|BB70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.5119
2114V9K|1|DB70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.5119
2124V9K|1|BB70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.5119
2134W29|1|DB70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-RAY DIFFRACTION3.8119
2144W29|1|BB70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-RAY DIFFRACTION3.8119

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0296 s