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Equivalence class NR_4.0_45441.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16FYY|1|2 (rep)Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)Electron microscopy3.022018-12-05
28RW1|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactis NRRL Y-1140EukaryaRF01960Structure of a yeast 48S-AUC preinitiation complex in closed conformationElectron microscopy3.352024-09-11
38S8D|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactis NRRL Y-1140EukaryaRF01960Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2)Electron microscopy3.452024-09-11
46FYX|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)Electron microscopy3.52018-12-05
56UZ7|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960K.lactis 80S ribosome with p/PE tRNA and eIF5BElectron microscopy3.62020-01-15
63JAM|1|2Small subunit ribosomal RNA18S rRNAKluyveromyces lactisEukaryaRF01960CryoEM structure of 40S-eIF1A-eIF1 complex from yeastElectron microscopy3.462015-08-12
78S8E|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactis NRRL Y-1140EukaryaRF01960Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.1)Electron microscopy3.852024-09-11
88S8F|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactis NRRL Y-1140EukaryaRF01960Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.2)Electron microscopy3.952024-09-11
98S8K|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactis NRRL Y-1140EukaryaRF01960Structure of a yeast 48S-AUC preinitiation complex in swivelled conformation (model py48S-AUC-swiv-eIF1)Electron microscopy42024-11-06
108S8G|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactis NRRL Y-1140EukaryaRF01960Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.1)Electron microscopy42024-09-11
118S8H|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactis NRRL Y-1140EukaryaRF01960Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.2)Electron microscopy42024-09-11
123J80|1|2Small subunit ribosomal RNA18S rRNAKluyveromyces lactisEukaryaRF01960CryoEM structure of 40S-eIF1-eIF1A preinitiation complexElectron microscopy3.752014-11-05
135IT7|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES and eEF2Electron microscopy3.62016-05-18
143J81|1|2Small subunit ribosomal RNA18S rRNAKluyveromyces lactisEukaryaRF01960CryoEM structure of a partial yeast 48S preinitiation complexElectron microscopy42014-11-05
155IT9|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES.Electron microscopy3.82016-05-18
164V92|1|A2Small subunit ribosomal RNA18S RRNAKluyveromyces lactisEukaryaRF01960Kluyveromyces lactis 80S ribosome in complex with CrPV-IRESElectron microscopy3.72014-07-09

Release history

Release3.3603.3613.3623.3633.3643.3653.3663.3673.368
Date2024-11-062024-11-132024-11-202024-11-272024-12-042024-12-112024-12-182024-12-252025-01-01

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Children

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
13J81|1|2CryoEM structure of a partial yeast 48S preinitiation complexELECTRON MICROSCOPY41780
26FYY|1|2Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)ELECTRON MICROSCOPY3.021768
36FYX|1|2Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)ELECTRON MICROSCOPY3.51768
48S8H|1|2Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.2)ELECTRON MICROSCOPY41798
58S8G|1|2Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2.1)ELECTRON MICROSCOPY41798
68S8E|1|2Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.1)ELECTRON MICROSCOPY3.851798
78S8D|1|2Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-2)ELECTRON MICROSCOPY3.451798
88RW1|1|2Structure of a yeast 48S-AUC preinitiation complex in closed conformationELECTRON MICROSCOPY3.351798
98S8F|1|2Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.2)ELECTRON MICROSCOPY3.951798
108S8K|1|2Structure of a yeast 48S-AUC preinitiation complex in swivelled conformation (model py48S-AUC-swiv-eIF1)ELECTRON MICROSCOPY41798
113JAM|1|2CryoEM structure of 40S-eIF1A-eIF1 complex from yeastELECTRON MICROSCOPY3.461780
123J80|1|2CryoEM structure of 40S-eIF1-eIF1A preinitiation complexELECTRON MICROSCOPY3.751779
135IT7|1|2Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES and eEF2ELECTRON MICROSCOPY3.61780
145IT9|1|2Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES.ELECTRON MICROSCOPY3.81780
156UZ7|1|2K.lactis 80S ribosome with p/PE tRNA and eIF5BELECTRON MICROSCOPY3.61780
164V92|1|A2Kluyveromyces lactis 80S ribosome in complex with CrPV-IRESELECTRON MICROSCOPY3.71764

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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