#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16ASO|1|I (rep)U6 spliceosomal RNASaccharomyces cerevisiae strain HB_S_GIMBLETTROAD_9 chromosome XII sequenceSaccharomyces cerevisiaeEukaryaRF00026Structure of yeast U6 snRNP with 3'-phosphate terminated U6 RNAX-ray diffraction2.712018-05-09
25VSU|1|IU6 spliceosomal RNASaccharomyces cerevisiae strain T8 chromosome XII sequenceSaccharomyces cerevisiaeEukaryaRF00026Structure of yeast U6 snRNP with 2'-phosphate terminated U6 RNAX-ray diffraction3.12018-05-09
35MPS|1|6U6 spliceosomal RNASaccharomyces cerevisiae strain T.52_2H chromosome XII sequence, U2 snRNA, Yeast UBC4 gene for ubiquitin-conjugating enzymeSaccharomyces cerevisiaeEukaryaRF00026Structure of a spliceosome remodeled for exon ligationElectron microscopy3.852017-01-18
45GMK|1|E+ 5GMK|1|LU6 spliceosomal RNA + U2 splicesomal small nuclear RNA5'-Splicing Site, Intron_BPS, U2 snRNA, U6 snRNASaccharomyces cerevisiaeEukaryaRF00026 + RF00004Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionElectron microscopy3.42016-08-17
55WSG|1|EU6 spliceosomal RNA3'-intron-lariat, 5'-intron-lariat, RNA (91-MER), Saccharomyces cerevisiae S288c SNR6 snRNASaccharomyces cerevisiaeEukaryaRF00026Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionElectron microscopy42017-01-25

Release history

Release3.213.223.233.243.253.263.273.283.293.30
Date2018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_56118.4NR_4.0_56118.33.21(3) 5GMK|1|E+5GMK|1|L, 5MPS|1|6, 5WSG|1|E(2) 5VSU|1|I, 6ASO|1|I(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_56118.4NR_4.0_56118.53.31(5) 5GMK|1|E+5GMK|1|L, 5MPS|1|6, 5VSU|1|I, 5WSG|1|E, 6ASO|1|I(0) (1) 5YLZ|1|D

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15GMK|1|E+ 5GMK|1|LCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.4103
25WSG|1|ECryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY4103
35MPS|1|6Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.8599
46ASO|1|IStructure of yeast U6 snRNP with 3'-phosphate terminated U6 RNAX-RAY DIFFRACTION2.7169
55VSU|1|IStructure of yeast U6 snRNP with 2'-phosphate terminated U6 RNAX-RAY DIFFRACTION3.172

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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