1 | 5J7L|1|AA (rep) | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-ray diffraction | 3 | 2016-07-27 |
2 | 4YBB|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
3 | 5J8A|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-ray diffraction | 3.1 | 2016-07-06 |
4 | 5JC9|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-ray diffraction | 3.03 | 2016-07-06 |
5 | 4WOI|1|DA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA | Escherichia coli | Bacteria | RF00177 | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-ray diffraction | 3 | 2015-08-05 |
6 | 4WOI|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA | Escherichia coli | Bacteria | RF00177 | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-ray diffraction | 3 | 2015-08-05 |
7 | 5IT8|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 3.12 | 2016-07-27 |
8 | 4V9P|1|FA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
9 | 4V9O|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
10 | 5J7L|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-ray diffraction | 3 | 2016-07-27 |
11 | 4V9P|1|HA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
12 | 4V9P|1|DA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
13 | 4V9P|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
14 | 5J8A|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-ray diffraction | 3.1 | 2016-07-06 |
15 | 4V9O|1|FA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
16 | 5J91|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-ray diffraction | 2.96 | 2016-07-06 |
17 | 6I7V|1|AA | Small subunit ribosomal RNA | 16S ribosmal RNA | Escherichia coli | Bacteria | RF00177 | Ribosomal protein paralogs bL31 and bL36 | X-ray diffraction | 2.9 | 2018-12-05 |
18 | 4V6C|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
19 | 5JC9|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-ray diffraction | 3.03 | 2016-07-06 |
20 | 4V52|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
21 | 4V9O|1|DA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
22 | 4V7T|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
23 | 4V57|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
24 | 4WWW|1|QA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
25 | 6LKQ|1|s | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin | X-ray diffraction | 3.1 | 2020-05-06 |
26 | 4V52|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
27 | 4V57|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
28 | 4U27|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
29 | 5J88|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-ray diffraction | 3.32 | 2016-07-06 |
30 | 4V7V|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
31 | 4V54|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
32 | 4WF1|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
33 | 4YBB|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
34 | 4U1U|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
35 | 4V64|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
36 | 4U26|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
37 | 4V53|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-ray diffraction | 3.54 | 2014-07-09 |
38 | 4V9D|1|AA | Small subunit ribosomal RNA | 16S rRNA, messenger RNA | Escherichia coli | Bacteria | RF00177 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
39 | 6I7V|1|BA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Ribosomal protein paralogs bL31 and bL36 | X-ray diffraction | 2.9 | 2018-12-05 |
40 | 4U24|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
41 | 4V7S|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
42 | 4U25|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
43 | 5IT8|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 3.12 | 2016-07-27 |
44 | 4V56|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-ray diffraction | 3.93 | 2014-07-09 |
45 | 4V9D|1|BA | Small subunit ribosomal RNA | 16S rRNA, messenger RNA | Escherichia coli | Bacteria | RF00177 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
46 | 4V54|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
47 | 4U27|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
48 | 4V64|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
49 | 4V53|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-ray diffraction | 3.54 | 2014-07-09 |
50 | 4V56|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-ray diffraction | 3.93 | 2014-07-09 |
51 | 4V7U|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
52 | 4V55|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-ray diffraction | 4 | 2014-07-09 |
53 | 4V50|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
54 | 4V9O|1|HA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
55 | 4WWW|1|XA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
56 | 4V4Q|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
57 | 4U20|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
58 | 4V55|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-ray diffraction | 4 | 2014-07-09 |
59 | 4U1U|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
60 | 4V50|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
61 | 4U1V|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
62 | 4U25|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
63 | 4V6C|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
64 | 6BY1|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli pH03H9 complex | X-ray diffraction | 3.94 | 2019-02-27 |
65 | 5J88|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-ray diffraction | 3.32 | 2016-07-06 |
66 | 4V4Q|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
67 | 6BY1|1|BA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA | Escherichia coli | Bacteria | RF00177 | E. coli pH03H9 complex | X-ray diffraction | 3.94 | 2019-02-27 |
68 | 4U26|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
69 | 4V85|1|AA | | 16S rRNA | | | | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome. | X-ray diffraction | 3.2 | 2014-07-09 |
70 | 5J91|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-ray diffraction | 2.96 | 2016-07-06 |
71 | 4V7T|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
72 | 4WF1|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
73 | 4U24|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
74 | 4U1V|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
75 | 4V6D|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.81 | 2014-07-09 |
76 | 4U20|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
77 | 4V89|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin) | X-ray diffraction | 3.7 | 2014-07-09 |
78 | 4V7S|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
79 | 4V6D|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.81 | 2014-07-09 |
80 | 4V7V|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
81 | 4V6E|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 2014-07-09 |
82 | 4V9C|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
83 | 4V9C|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
84 | 4V7U|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
85 | 4V6E|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 2014-07-09 |
86 | 4V5B|1|BA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Structure of PDF binding helix in complex with the ribosome | X-ray diffraction | 3.74 | 2014-07-09 |
87 | 4V5B|1|DA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Structure of PDF binding helix in complex with the ribosome | X-ray diffraction | 3.74 | 2014-07-09 |
88 | 5J5B|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the WT E coli ribosome bound to tetracycline | X-ray diffraction | 2.8 | 2016-07-27 |
89 | 4V4H|1|CA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
90 | 4V4H|1|AA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
91 | 5J5B|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the WT E coli ribosome bound to tetracycline | X-ray diffraction | 2.8 | 2016-07-27 |
92 | 8B0X|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli B | Bacteria | RF00177 | Translating 70S ribosome in the unrotated state (P and E, tRNAs) | Electron microscopy | 1.55 | 2022-11-30 |
93 | 8FTO|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S ribosome with an improved MS2 tag inserted in H98 | Electron microscopy | 1.85 | 2023-08-02 |
94 | 8AYE|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S ribosome bound to thermorubin and fMet-tRNA | Electron microscopy | 1.96 | 2023-03-01 |
95 | 7K00|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 2020-09-23 |
96 | 8QOA|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Structure of SecM-stalled Escherichia coli 70S ribosome | Electron microscopy | 2 | 2024-03-20 |
97 | 8G6W|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe | Electron microscopy | 2.02 | 2023-04-05 |
98 | 8BIM|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site | Electron microscopy | 2.04 | 2023-08-16 |
99 | 8BIL|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site. | Electron microscopy | 2.04 | 2023-08-16 |
100 | 8EMM|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates | Electron microscopy | 2.1 | 2023-05-31 |
101 | 8QBT|1|i | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | E. coli ApdP-stalled ribosomal complex | Electron microscopy | 2.2 | 2024-03-20 |
102 | 8BGE|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.11 | 2023-08-16 |
103 | 8R6C|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli BW25113 | Bacteria | RF00177 | 70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA. | Electron microscopy | 2.2 | 2024-07-24 |
104 | 8EIU|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S ribosome with A-loop mutations U2554C and U2555C | Electron microscopy | 2.24 | 2023-02-01 |
105 | 8BF7|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.33 | 2023-08-16 |
106 | 7S1H|1|C | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Wild-type Escherichia coli ribosome with antibiotic linezolid | Electron microscopy | 2.35 | 2021-11-17 |
107 | 7N1P|1|16 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation | Electron microscopy | 2.33 | 2021-07-14 |
108 | 8AKN|1|B | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli BW25113 | Bacteria | RF00177 | Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome | Electron microscopy | 2.3 | 2023-03-08 |
109 | 8BHL|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.21 | 2023-08-16 |
110 | 8HSP|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state | Electron microscopy | 2.32 | 2024-04-03 |
111 | 7Y7G|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) | Electron microscopy | 2.34 | 2023-10-25 |
112 | 7S1K|1|C | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid | Electron microscopy | 2.42 | 2022-01-19 |
113 | 9FBV|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli BW25113 | Bacteria | RF00177 | 70S Escherichia coli ribosome with P-site initiatior tRNA. | Electron microscopy | 2.4 | 2024-06-26 |
114 | 8R8M|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli BW25113 | Bacteria | RF00177 | 70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA. | Electron microscopy | 2.4 | 2024-07-24 |
115 | 7S1J|1|C | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Wild-type Escherichia coli ribosome with antibiotic radezolid | Electron microscopy | 2.47 | 2022-03-02 |
116 | 8HTZ|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state | Electron microscopy | 2.4 | 2024-04-03 |
117 | 7O1A|1|AA | Small subunit ribosomal RNA | Ribosomal RNA 16S | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan | Electron microscopy | 2.4 | 2021-09-01 |
118 | 7S1I|1|C | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Wild-type Escherichia coli stalled ribosome with antibiotic radezolid | Electron microscopy | 2.48 | 2022-03-02 |
119 | 7S1G|1|C | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | wild-type Escherichia coli stalled ribosome with antibiotic linezolid | Electron microscopy | 2.48 | 2021-11-17 |
120 | 7Y7E|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU) | Electron microscopy | 2.41 | 2023-10-25 |
121 | 7Y7F|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC) | Electron microscopy | 2.43 | 2023-10-25 |
122 | 8IFB|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Dibekacin-bound E.coli 70S ribosome in the PURE system | Electron microscopy | 2.43 | 2024-02-14 |
123 | 8BHP|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.37 | 2023-08-16 |
124 | 7N2U|1|16 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation | Electron microscopy | 2.53 | 2021-07-14 |
125 | 7N2V|1|16 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1) | Electron microscopy | 2.54 | 2021-07-14 |
126 | 7Y7C|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU) | Electron microscopy | 2.51 | 2023-10-25 |
127 | 7Y7H|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC) | Electron microscopy | 2.51 | 2023-10-25 |
128 | 7SA4|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Damaged 70S ribosome with PrfH bound | Electron microscopy | 2.55 | 2022-08-03 |
129 | 6YSS|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state | Electron microscopy | 2.6 | 2020-08-19 |
130 | 8BH4|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.62 | 2023-08-16 |
131 | 7Y7D|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU) | Electron microscopy | 2.58 | 2023-10-25 |
132 | 7UG7|1|16 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B | Electron microscopy | 2.58 | 2022-05-18 |
133 | 6XZB|1|A1 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification). | Electron microscopy | 2.54 | 2020-11-04 |
134 | 7NWT|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV) | Electron microscopy | 2.66 | 2021-12-15 |
135 | 7N30|1|16 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation | Electron microscopy | 2.66 | 2021-07-14 |
136 | 7N31|1|16 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating 70S ribosome complex in a post-translocation (POST) conformation | Electron microscopy | 2.69 | 2021-07-14 |
137 | 7ZTA|1|16S1 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide | Electron microscopy | 2.7 | 2023-04-12 |
138 | 6TC3|1|16S1 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1) | Electron microscopy | 2.7 | 2020-01-01 |
139 | 6TBV|1|16S1 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2) | Electron microscopy | 2.7 | 2020-01-01 |
140 | 8CGJ|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Streptomycin bound to the 30S body | Electron microscopy | 1.79 | 2023-07-26 |
141 | 8EKC|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA | Electron microscopy | 2.7 | 2022-12-07 |
142 | 8HU1|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state | Electron microscopy | 2.69 | 2024-04-03 |
143 | 7N2C|1|16 | Small subunit ribosomal RNA | 16S rRNA, Chains: mR | Escherichia coli K-12 | Bacteria | RF00177 | Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2) | Electron microscopy | 2.72 | 2021-07-14 |
144 | 6XZA|1|A1 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification). | Electron microscopy | 2.66 | 2020-11-04 |
145 | 8P18|1|2 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli | Bacteria | RF00177 | E167K RF2 on E. coli 70S release complex with UGG (Structure III) | Electron microscopy | 2.77 | 2024-05-22 |
146 | 8P16|1|2 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli | Bacteria | RF00177 | E167K RF2 on E. coli 70S release complex with UGG (Structure I) | Electron microscopy | 2.77 | 2024-05-22 |
147 | 8P17|1|2 | Small subunit ribosomal RNA | 16S RNA, mRNA | Escherichia coli | Bacteria | RF00177 | E167K RF2 on E. coli 70S release complex with UGG (Structure II) | Electron microscopy | 2.78 | 2024-05-22 |
148 | 8BHJ|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.81 | 2023-08-16 |
149 | 7M5D|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I) | Electron microscopy | 2.8 | 2022-10-19 |
150 | 8G7R|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III) | Electron microscopy | 2.8 | 2024-03-06 |
151 | 7O1C|1|AA | Small subunit ribosomal RNA | Ribosomal RNA 16S | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan | Electron microscopy | 2.6 | 2021-09-01 |
152 | 6Y69|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX | Electron microscopy | 2.86 | 2020-07-01 |
153 | 8AM9|1|B | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli BW25113 | Bacteria | RF00177 | Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome | Electron microscopy | 2.8 | 2023-03-08 |
154 | 8BGH|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation | Electron microscopy | 2.88 | 2023-08-16 |
155 | 7NSO|1|a | Small subunit ribosomal RNA | 16S rRNA (1540-MER) | Escherichia coli | Bacteria | RF00177 | Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA | Electron microscopy | 2.9 | 2021-07-14 |
156 | 7ST2|1|3 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII) | Electron microscopy | 2.9 | 2022-02-23 |
157 | 5AFI|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
158 | 7BOH|1|A | Small subunit ribosomal RNA | RNA (1527-MER) | Escherichia coli K-12 | Bacteria | RF00177 | Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement) | Electron microscopy | 2.82 | 2021-12-08 |
159 | 7OT5|1|2 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | CspA-70 cotranslational folding intermediate 1 | Electron microscopy | 2.9 | 2022-01-19 |
160 | 7OTC|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli BL21(DE3) | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B | Electron microscopy | 2.9 | 2022-05-11 |
161 | 7B5K|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain. | Electron microscopy | 2.9 | 2021-05-26 |
162 | 8G7P|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I) | Electron microscopy | 2.9 | 2024-03-06 |
163 | 8FZH|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D) | Electron microscopy | 2.9 | 2024-07-17 |
164 | 8SYL|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs | Electron microscopy | 2.9 | 2023-08-09 |
165 | 7P3K|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control) | Electron microscopy | 2.9 | 2021-10-27 |
166 | 7OIZ|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide | Electron microscopy | 2.9 | 2021-09-15 |
167 | 8IFC|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Arbekacin-bound E.coli 70S ribosome in the PURE system | Electron microscopy | 2.9 | 2024-02-14 |
168 | 5NWY|1|0 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex | Electron microscopy | 2.9 | 2017-07-19 |
169 | 7ST6|1|3 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Pre translocation, non-rotated 70S ribosome (Structure I) | Electron microscopy | 3 | 2022-02-23 |
170 | 8G2U|1|v | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms | Electron microscopy | 3 | 2023-12-06 |
171 | 6WD0|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | Electron microscopy | 3 | 2020-07-01 |
172 | 7TOS|1|16S | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20 | Electron microscopy | 2.9 | 2022-05-25 |
173 | 6H4N|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome | Electron microscopy | 3 | 2018-09-05 |
174 | 6WDE|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) | Electron microscopy | 3 | 2020-07-01 |
175 | 6ORE|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Release complex 70S | Electron microscopy | 2.9 | 2019-06-19 |
176 | 8GHU|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Methyltransferase RmtC bound to the 30S ribosomal subunit | Electron microscopy | 3 | 2023-04-12 |
177 | 5H5U|1|h | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Mechanistic insights into the alternative translation termination by ArfA and RF2 | Electron microscopy | 3.01 | 2017-01-25 |
178 | 5WDT|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome-EF-Tu H84A complex with GppNHp | Electron microscopy | 3 | 2018-04-25 |
179 | 5WFS|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | Electron microscopy | 3 | 2018-05-02 |
180 | 8CGU|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Gentamicin bound to the 30S body | Electron microscopy | 1.89 | 2023-07-26 |
181 | 7O19|1|AA | Small subunit ribosomal RNA | Ribosomal RNA 16S | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan | Electron microscopy | 2.9 | 2021-09-01 |
182 | 7OIF|1|2 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | CspA-27 cotranslational folding intermediate 2 | Electron microscopy | 3 | 2022-01-19 |
183 | 7OII|1|2 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | CspA-70 cotranslational folding intermediate 2 | Electron microscopy | 3 | 2022-01-19 |
184 | 8B7Y|1|C | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B. | Electron microscopy | 3 | 2023-01-25 |
185 | 8FZE|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A) | Electron microscopy | 3 | 2024-07-17 |
186 | 8FZJ|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C) | Electron microscopy | 3 | 2024-07-17 |
187 | 7BOE|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement) | Electron microscopy | 2.9 | 2021-12-08 |
188 | 6SZS|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis | Electron microscopy | 3.06 | 2019-12-04 |
189 | 8CAI|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Streptomycin and Hygromycin B bound to the 30S body | Electron microscopy | 2.08 | 2023-07-26 |
190 | 8BHN|1|2 | Small subunit ribosomal RNA | 16S rRNA RRSB-RRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site | Electron microscopy | 2.85 | 2023-08-16 |
191 | 7NWW|1|2 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | CspA-27 cotranslational folding intermediate 1 | Electron microscopy | 3.05 | 2022-01-19 |
192 | 5MDV|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | Electron microscopy | 2.97 | 2016-12-14 |
193 | 7NSQ|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA | Electron microscopy | 3.1 | 2021-07-14 |
194 | 5MGP|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs | Electron microscopy | 3.1 | 2016-12-14 |
195 | 6ENU|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P) | Electron microscopy | 3.1 | 2017-11-22 |
196 | 7AC7|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Structure of accomodated trans-translation complex on E. Coli stalled ribosome. | Electron microscopy | 3.08 | 2021-08-18 |
197 | 7Q4K|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain | Electron microscopy | 3 | 2022-11-16 |
198 | 7NAX|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement) | Electron microscopy | 2.96 | 2021-12-08 |
199 | 8PKL|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state) | Electron microscopy | 3.09 | 2024-03-06 |
200 | 7PJV|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi) | Electron microscopy | 3.1 | 2021-10-20 |
201 | 5WE4|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome-EF-Tu wt complex with GppNHp | Electron microscopy | 3.1 | 2018-04-25 |
202 | 7PJY|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP) | Electron microscopy | 3.1 | 2021-10-20 |
203 | 6YSR|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the P+9 stalled ribosome complex | Electron microscopy | 3.1 | 2020-08-19 |
204 | 6ZTP|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-RNAP expressome complex in uncoupled state 6 | Electron microscopy | 3 | 2020-09-16 |
205 | 6ZTO|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-RNAP expressome complex in uncoupled state 1 | Electron microscopy | 3 | 2020-09-23 |
206 | 6ZU1|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-RNAP expressome complex in uncoupled state 2 | Electron microscopy | 3 | 2020-09-16 |
207 | 8URY|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosome | Electron microscopy | 3.1 | 2024-06-12 |
208 | 6X7K|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.1 | 2020-09-02 |
209 | 7NBU|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome. | Electron microscopy | 3.11 | 2022-03-02 |
210 | 6OM6|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | Electron microscopy | 3.1 | 2021-02-10 |
211 | 8G7Q|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II) | Electron microscopy | 3.1 | 2024-03-06 |
212 | 8FZG|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A) | Electron microscopy | 3.1 | 2024-07-17 |
213 | 8G7S|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV) | Electron microscopy | 3.1 | 2024-03-06 |
214 | 8FZI|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B) | Electron microscopy | 3.1 | 2024-07-17 |
215 | 8FZD|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B) | Electron microscopy | 3.1 | 2024-07-17 |
216 | 8Q4F|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of arbekacin bound Escherichia coli 70S ribosome | Electron microscopy | 3.1 | 2024-08-14 |
217 | 8CEP|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Round2 30S head (no antibiotic) | Electron microscopy | 2.04 | 2023-07-19 |
218 | 7LV0|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS) | Electron microscopy | 3.2 | 2021-07-28 |
219 | 7K53|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS) | Electron microscopy | 3.2 | 2021-07-28 |
220 | 7SSO|1|3 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A) | Electron microscopy | 3.2 | 2022-02-23 |
221 | 7ST7|1|3 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio) | Electron microscopy | 3.2 | 2022-02-23 |
222 | 7K54|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS) | Electron microscopy | 3.2 | 2021-07-28 |
223 | 6ENF|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P | Electron microscopy | 3.2 | 2017-11-22 |
224 | 7SSN|1|3 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B) | Electron microscopy | 3.2 | 2022-02-23 |
225 | 8G34|1|v | Small subunit ribosomal RNA | 16S | Escherichia coli | Bacteria | RF00177 | Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate | Electron microscopy | 3.2 | 2023-12-06 |
226 | 8G38|1|v | Small subunit ribosomal RNA | 16S | Escherichia coli | Bacteria | RF00177 | Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate | Electron microscopy | 3.2 | 2023-12-06 |
227 | 8G31|1|v | Small subunit ribosomal RNA | 16S | Escherichia coli | Bacteria | RF00177 | Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate | Electron microscopy | 3.2 | 2023-12-06 |
228 | 5U9G|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, truncated mRNA | Escherichia coli | Bacteria | RF00177 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I) | Electron microscopy | 3.2 | 2017-03-22 |
229 | 6WNW|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA | Electron microscopy | 3.2 | 2020-06-24 |
230 | 5U9F|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, truncated mRNA | Escherichia coli | Bacteria | RF00177 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II) | Electron microscopy | 3.2 | 2017-03-22 |
231 | 6WDD|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A) | Electron microscopy | 3.2 | 2020-07-01 |
232 | 3JCE|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | Electron microscopy | 3.2 | 2016-01-13 |
233 | 5UYM|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III) | Electron microscopy | 3.2 | 2017-06-07 |
234 | 6YST|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state | Electron microscopy | 3.2 | 2020-08-19 |
235 | 7ABZ|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome. | Electron microscopy | 3.21 | 2021-08-18 |
236 | 8CGR|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Apramycin bound to the 30S body | Electron microscopy | 2.12 | 2023-07-26 |
237 | 8UQL|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | Electron microscopy | 3.2 | 2024-05-29 |
238 | 6X6T|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.2 | 2020-09-02 |
239 | 5MDW|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state) | Electron microscopy | 3.06 | 2016-12-14 |
240 | 7OIG|1|2 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | CspA-27 cotranslational folding intermediate 3 | Electron microscopy | 3.2 | 2022-01-19 |
241 | 7ACJ|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF00177 | Structure of translocated trans-translation complex on E. coli stalled ribosome. | Electron microscopy | 3.2 | 2021-08-18 |
242 | 8FZF|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C) | Electron microscopy | 3.2 | 2024-06-26 |
243 | 5MDZ|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S ribosome (empty A site) | Electron microscopy | 3.1 | 2016-12-14 |
244 | 7OE0|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | E. coli pre-30S delta rbfA ribosomal subunit class F | Electron microscopy | 2.69 | 2021-07-14 |
245 | 7NAR|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement) | Electron microscopy | 3 | 2021-12-08 |
246 | 6C4I|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Conformation of methylated GGQ in the peptidyl transferase center during translation termination | Electron microscopy | 3.24 | 2018-02-21 |
247 | 8EYT|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 30S_delta_ksgA+KsgA complex | Electron microscopy | 2.8 | 2023-09-06 |
248 | 8R3V|1|A1 | Small subunit ribosomal RNA | 16S ribosomal RNA, messenger RNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli paused disome complex (non-rotated disome interface) | Electron microscopy | 3.28 | 2024-03-06 |
249 | 7JT1|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF00177 | 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III) | Electron microscopy | 3.3 | 2020-11-11 |
250 | 7K55|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS) | Electron microscopy | 3.3 | 2021-07-28 |
251 | 7SSD|1|3 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Mid translocation intermediate with EF-G bound with GDP (Structure IV) | Electron microscopy | 3.3 | 2022-02-23 |
252 | 6WDG|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B) | Electron microscopy | 3.3 | 2020-07-01 |
253 | 6WD1|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B) | Electron microscopy | 3.3 | 2020-07-01 |
254 | 6WDF|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A) | Electron microscopy | 3.3 | 2020-07-01 |
255 | 8R3V|1|A2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli paused disome complex (non-rotated disome interface) | Electron microscopy | 3.28 | 2024-03-06 |
256 | 6OFX|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Non-rotated ribosome (Structure I) | Electron microscopy | 3.3 | 2019-09-25 |
257 | 6VWL|1|1 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation) | Electron microscopy | 3.1 | 2020-06-03 |
258 | 8PEG|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state) | Electron microscopy | 3.3 | 2024-03-06 |
259 | 6OG7|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II) | Electron microscopy | 3.3 | 2019-09-25 |
260 | 7CPJ|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | ycbZ-stalled 70S ribosome | Electron microscopy | 3.3 | 2021-12-08 |
261 | 7QGN|1|0 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the SmrB-bound E. coli disome - stalled 70S ribosome | Electron microscopy | 3.37 | 2022-04-27 |
262 | 7K50|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Pre-translocation non-frameshifting(CCA-A) complex (Structure I) | Electron microscopy | 3.4 | 2021-07-28 |
263 | 5O2R|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome | Electron microscopy | 3.4 | 2017-07-26 |
264 | 7D6Z|1|f | Small subunit ribosomal RNA | 16S ribosomal rRNA | Escherichia coli | Bacteria | RF00177 | Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor | Electron microscopy | 3.4 | 2021-04-07 |
265 | 7K52|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III) | Electron microscopy | 3.4 | 2021-07-28 |
266 | 6OGI|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V) | Electron microscopy | 3.4 | 2019-09-25 |
267 | 5WFK|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3) | Electron microscopy | 3.4 | 2018-05-02 |
268 | 5LZD|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA) | Electron microscopy | 3.4 | 2016-11-23 |
269 | 5WE6|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA | Electron microscopy | 3.4 | 2018-04-25 |
270 | 8UR0|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | Electron microscopy | 3.4 | 2024-05-29 |
271 | 8A3L|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Structural insights into the binding of bS1 to the ribosome | Electron microscopy | 3.42 | 2023-05-10 |
272 | 7ACR|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF00177 | Structure of post-translocated trans-translation complex on E. coli stalled ribosome. | Electron microscopy | 3.44 | 2021-08-18 |
273 | 7NSP|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA | Electron microscopy | 3.5 | 2021-08-11 |
274 | 7JT2|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF00177 | 70S ribosome stalled on long mRNA with ArfB bound in the A site | Electron microscopy | 3.5 | 2020-11-11 |
275 | 7K51|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II) | Electron microscopy | 3.5 | 2021-07-28 |
276 | 6WNV|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome without free 5S rRNA and with a perturbed PTC | Electron microscopy | 3.5 | 2020-06-24 |
277 | 6BU8|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome with S1 domains 1 and 2 (Class 1) | Electron microscopy | 3.5 | 2018-01-31 |
278 | 8RCL|1|A1 | Small subunit ribosomal RNA | 16S ribosomal RNA, messenger RNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli paused disome complex (Non-rotated disome interface class 1) | Electron microscopy | 3.49 | 2024-03-13 |
279 | 8RCL|1|A2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli paused disome complex (Non-rotated disome interface class 1) | Electron microscopy | 3.49 | 2024-03-13 |
280 | 5LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|x | Small subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA | 16S ribosomal RNA, fMetSec-tRNASec, SECIS mRNA, tRNAfMet | Escherichia coli | Bacteria | RF00177 + RF01852 + RF00005 | Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C) | Electron microscopy | 3.5 | 2016-11-23 |
281 | 5MDY|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state) | Electron microscopy | 3.35 | 2016-12-21 |
282 | 6X7F|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.5 | 2020-09-02 |
283 | 5U4I|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | Electron microscopy | 3.5 | 2017-01-11 |
284 | 6ZTM|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-RNAP expressome complex in collided state without NusG | Electron microscopy | 3.3 | 2020-09-16 |
285 | 7OJ0|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2 | Electron microscopy | 3.5 | 2021-09-15 |
286 | 6ZTJ|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA) | Electron microscopy | 3.4 | 2020-09-16 |
287 | 5UYL|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II) | Electron microscopy | 3.6 | 2017-06-14 |
288 | 5KCR|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution | Electron microscopy | 3.6 | 2016-08-17 |
289 | 5IQR|1|2 | Small subunit ribosomal RNA | SSU rRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to the 70S ribosome | Electron microscopy | 3 | 2016-05-04 |
290 | 6WDM|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2) | Electron microscopy | 3.6 | 2020-07-01 |
291 | 6WDK|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2) | Electron microscopy | 3.6 | 2020-07-08 |
292 | 8RCM|1|A1 | Small subunit ribosomal RNA | 16S ribosomal RNA, messenger RNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli paused disome complex (Non-rotated disome interface class 2) | Electron microscopy | 3.59 | 2024-03-06 |
293 | 6WD3|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1) | Electron microscopy | 3.6 | 2020-07-08 |
294 | 6WD5|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1) | Electron microscopy | 3.6 | 2020-07-08 |
295 | 6WD2|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A) | Electron microscopy | 3.6 | 2020-07-08 |
296 | 8EYQ|1|A | Small subunit ribosomal RNA | 16S_rRNA | Escherichia coli | Bacteria | RF00177 | 30S_delta_ksgA_h44_inactive_conformation | Electron microscopy | 3.3 | 2023-09-06 |
297 | 8RCM|1|A2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli paused disome complex (Non-rotated disome interface class 2) | Electron microscopy | 3.59 | 2024-03-06 |
298 | 3JBV|1|A | Small subunit ribosomal RNA | RNA (1530-MER) | Escherichia coli | Bacteria | RF00177 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.32 | 2016-01-27 |
299 | 5WF0|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) | Electron microscopy | 3.6 | 2018-05-02 |
300 | 5LZA|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA, SECIS mRNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC) | Electron microscopy | 3.6 | 2016-11-23 |
301 | 6OSQ|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | RF1 accommodated state bound Release complex 70S at long incubation time point | Electron microscopy | 3.5 | 2019-06-26 |
302 | 6VWM|1|1 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I) | Electron microscopy | 3.4 | 2020-06-03 |
303 | 6VWN|1|1 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II) | Electron microscopy | 3.4 | 2020-06-03 |
304 | 5JTE|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA | Electron microscopy | 3.6 | 2016-07-20 |
305 | 5JU8|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA | Electron microscopy | 3.6 | 2016-07-20 |
306 | 7JSS|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF00177 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II) | Electron microscopy | 3.7 | 2020-11-11 |
307 | 3JCJ|1|g | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association | Electron microscopy | 3.7 | 2016-03-09 |
308 | 7JSZ|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV) | Electron microscopy | 3.7 | 2020-11-11 |
309 | 7JT3|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF00177 | Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV) | Electron microscopy | 3.7 | 2020-11-11 |
310 | 6ENJ|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) | Electron microscopy | 3.7 | 2017-11-22 |
311 | 3J9Z|1|SA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | Electron microscopy | 3.6 | 2015-07-01 |
312 | 6WDL|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1) | Electron microscopy | 3.7 | 2020-07-01 |
313 | 6WDJ|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1) | Electron microscopy | 3.7 | 2020-07-01 |
314 | 6WD9|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B) | Electron microscopy | 3.7 | 2020-07-08 |
315 | 6WD4|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2) | Electron microscopy | 3.7 | 2020-07-08 |
316 | 6WD8|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A) | Electron microscopy | 3.7 | 2020-07-08 |
317 | 6WD6|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2) | Electron microscopy | 3.7 | 2020-07-08 |
318 | 3JCD|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4) | Electron microscopy | 3.7 | 2016-01-13 |
319 | 6YSU|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state | Electron microscopy | 3.7 | 2020-08-19 |
320 | 5L3P|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex | Electron microscopy | 3.7 | 2016-07-20 |
321 | 6DNC|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon | Electron microscopy | 3.7 | 2018-07-04 |
322 | 6VYS|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli transcription-translation complex A1 (TTC-A1) containing a 21 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 3.7 | 2020-09-02 |
323 | 6VYQ|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 3.7 | 2020-09-02 |
324 | 6XDQ|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.7 | 2020-09-02 |
325 | 6VU3|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer | Electron microscopy | 3.7 | 2020-09-02 |
326 | 6OSK|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | RF1 accommodated 70S complex at 60 ms | Electron microscopy | 3.6 | 2019-06-26 |
327 | 8PHJ|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | cA4-bound Cami1 in complex with 70S ribosome | Electron microscopy | 3.67 | 2023-12-13 |
328 | 6ORL|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | RF1 pre-accommodated 70S complex at 24 ms | Electron microscopy | 3.5 | 2019-06-19 |
329 | 5UYQ|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc) | Electron microscopy | 3.8 | 2017-06-07 |
330 | 6GXM|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II) | Electron microscopy | 3.8 | 2018-08-22 |
331 | 6GWT|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I) | Electron microscopy | 3.8 | 2018-08-15 |
332 | 7JSW|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III) | Electron microscopy | 3.8 | 2020-11-11 |
333 | 7SSL|1|3 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III) | Electron microscopy | 3.8 | 2022-02-23 |
334 | 7SSW|1|3 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Late translocation intermediate with EF-G dissociated (Structure VI) | Electron microscopy | 3.8 | 2022-02-23 |
335 | 6W6K|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 30S-Activated-high-Mg2+ | Electron microscopy | 3.6 | 2020-10-21 |
336 | 6WDA|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C) | Electron microscopy | 3.8 | 2020-07-08 |
337 | 6W77|1|A | Small subunit ribosomal RNA | RNA (1519-MER) | Escherichia coli | Bacteria | RF00177 | 30S-Inactivated-high-Mg2+ Class A | Electron microscopy | 3.6 | 2020-10-21 |
338 | 8UQP|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | Electron microscopy | 3.8 | 2024-05-29 |
339 | 6VYR|1|D | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 3.8 | 2020-09-02 |
340 | 6Q9A|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome | Electron microscopy | 3.7 | 2019-04-17 |
341 | 8K4E|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex-II | Electron microscopy | 3.4 | 2024-07-24 |
342 | 7BOG|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state E (body domain) | Electron microscopy | 2.75 | 2021-07-07 |
343 | 6OUO|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | RF2 accommodated state bound 70S complex at long incubation time | Electron microscopy | 3.7 | 2019-06-19 |
344 | 5UYP|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc) | Electron microscopy | 3.9 | 2017-06-07 |
345 | 6GXO|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV) | Electron microscopy | 3.9 | 2018-08-15 |
346 | 6GXN|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III) | Electron microscopy | 3.9 | 2018-08-15 |
347 | 7SS9|1|3 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Late translocation intermediate with EF-G partially dissociated (Structure V) | Electron microscopy | 3.9 | 2022-02-23 |
348 | 6WD7|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D) | Electron microscopy | 3.9 | 2020-07-08 |
349 | 6OGF|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III). | Electron microscopy | 3.9 | 2019-09-25 |
350 | 5UYK|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I) | Electron microscopy | 3.9 | 2017-06-07 |
351 | 6O9J|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S Elongation Competent Ribosome | Electron microscopy | 3.9 | 2019-05-29 |
352 | 7OE1|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli str. K-12 substr. MG1655 | Bacteria | RF00177 | 30S ribosomal subunit from E. coli | Electron microscopy | 3.05 | 2021-07-14 |
353 | 5KPW|1|26 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III) | Electron microscopy | 3.9 | 2016-09-28 |
354 | 3J9Y|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | Electron microscopy | 3.9 | 2015-04-15 |
355 | 5KCS|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution | Electron microscopy | 3.9 | 2016-08-17 |
356 | 6W7N|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 30S-Inactive-low-Mg2+ Class A | Electron microscopy | 3.4 | 2020-10-21 |
357 | 8VSA|1|16S | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosome | Electron microscopy | 3.7 | 2024-05-01 |
358 | 5KPS|1|27 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) | Electron microscopy | 3.9 | 2016-09-28 |
359 | 7QG8|1|0 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Structure of the collided E. coli disome - VemP-stalled 70S ribosome | Electron microscopy | 3.97 | 2022-03-16 |
360 | 5UYN|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | 70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc) | Electron microscopy | 4 | 2017-06-07 |
361 | 6O9K|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 70S initiation complex | Electron microscopy | 4 | 2019-05-29 |
362 | 6WDI|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2) | Electron microscopy | 4 | 2020-07-01 |
363 | 6ZTL|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-RNAP expressome complex in collided state bound to NusG | Electron microscopy | 3.5 | 2020-09-16 |
364 | 6WDB|1|3 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A) | Electron microscopy | 4 | 2020-07-01 |
365 | 5KPX|1|26 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV) | Electron microscopy | 3.9 | 2016-09-28 |
366 | 7PJW|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi) | Electron microscopy | 4 | 2021-10-20 |
367 | 7BOD|1|A | Small subunit ribosomal RNA | 16S rRNA (body domain of 30S subunit) | Escherichia coli K-12 | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state M (body domain) | Electron microscopy | 2.88 | 2021-07-07 |
368 | 6Q97|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome | Electron microscopy | 3.9 | 2019-03-13 |
369 | 3JBU|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.64 | 2016-01-27 |
370 | 6OT3|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | RF2 accommodated state bound Release complex 70S at 24 ms | Electron microscopy | 3.9 | 2019-06-19 |
371 | 7BOF|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state I (body domain) | Electron microscopy | 2.92 | 2021-07-07 |
372 | 6W7M|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 30S-Inactive-high-Mg2+ + carbon layer | Electron microscopy | 3.8 | 2020-10-21 |
373 | 8VS9|1|16S | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site and deacyl-tRNA in the E site of E. coli 70S ribosome | Electron microscopy | 3.9 | 2024-05-01 |
374 | 6ZTN|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA) | Electron microscopy | 3.9 | 2020-09-16 |
375 | 5NP6|1|D | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 70S structure prior to bypassing | Electron microscopy | 3.6 | 2017-06-14 |
376 | 8FIZ|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex) | Electron microscopy | 3.8 | 2023-03-29 |
377 | 8CF1|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Tetracycline bound to the 30S head | Electron microscopy | 1.82 | 2023-07-26 |
378 | 8K3O|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex I | Electron microscopy | 3.88 | 2024-07-24 |
379 | 7BOI|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome) | Electron microscopy | 2.98 | 2021-07-07 |
380 | 3JA1|1|SA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | Electron microscopy | 3.6 | 2015-07-01 |
381 | 7PJS|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C) | Electron microscopy | 2.35 | 2021-10-20 |
382 | 8CGI|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Pentacycline TP038 bound to the 30S head | Electron microscopy | 1.89 | 2023-07-26 |
383 | 6NQB|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit | Electron microscopy | 3.8 | 2019-06-26 |
384 | 8CA7|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Omadacycline and spectinomycin bound to the 30S ribosomal subunit head | Electron microscopy | 2.06 | 2023-08-02 |
385 | 7NAT|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement) | Electron microscopy | 3.59 | 2021-12-08 |
386 | 7O5H|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Ribosomal methyltransferase KsgA bound to small ribosomal subunit | Electron microscopy | 3.1 | 2021-06-16 |
387 | 8CAZ|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | empty 30S head | Electron microscopy | 2.11 | 2023-07-26 |
388 | 8CF8|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Eravacycline bound to the 30S head | Electron microscopy | 2.2 | 2023-08-02 |
389 | 7OI0|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | E.coli delta rbfA pre-30S ribosomal subunit class D | Electron microscopy | 2.76 | 2021-07-14 |
390 | 7NAU|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state C (Consensus Refinement) | Electron microscopy | 3.78 | 2021-12-08 |
391 | 7NAS|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli K-12 | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state A (multibody refinement for body domain of 30S ribosome) | Electron microscopy | 3.31 | 2021-07-07 |
392 | 7AF8|1|1 | Small subunit ribosomal RNA | 16SrRNA (head domain of the 30S ribosome | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state E (head domain) | Electron microscopy | 2.75 | 2021-07-07 |
393 | 7AFO|1|A | Small subunit ribosomal RNA | 16SrRNA (body domain of the 30S ribosome) | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state B (body domain) | Electron microscopy | 3.93 | 2021-07-07 |
394 | 7AF3|1|1 | Small subunit ribosomal RNA | 16S rRNA (head) | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state M (head domain) | Electron microscopy | 2.82 | 2021-07-07 |
395 | 7AF5|1|1 | Small subunit ribosomal RNA | 16SrRNA (head domain of the 30S ribosome) | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state I (head domain) | Electron microscopy | 2.96 | 2021-07-07 |
396 | 7AFA|1|1 | Small subunit ribosomal RNA | 16SrRNA (head domain of the 30S ribosome) | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state F (head domain) | Electron microscopy | 2.95 | 2021-07-07 |
397 | 6W7W|1|2 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | 30S-Inactive-low-Mg2+ Class B | Electron microscopy | 3.9 | 2020-10-21 |
398 | 7AFI|1|A | Small subunit ribosomal RNA | 16SrRNA | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state C (body domain) | Electron microscopy | 3.53 | 2021-07-07 |
399 | 5U4J|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | Electron microscopy | 3.7 | 2017-01-11 |
400 | 7AFD|1|1 | Small subunit ribosomal RNA | 16SrRNA of the head domain (residue C931 to G1386) | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state A (head domain) | Electron microscopy | 3.44 | 2021-07-07 |
401 | 7AFH|1|1 | Small subunit ribosomal RNA | 16SrRNA (head domain of the 30S ribosome) | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state C (head domain) | Electron microscopy | 3.59 | 2021-07-07 |
402 | 7AFN|1|1 | Small subunit ribosomal RNA | 16SrRNA (head domain of the 30S ribosome) | Escherichia coli | Bacteria | RF00177 | Bacterial 30S ribosomal subunit assembly complex state B (head domain) | Electron microscopy | 3.86 | 2021-07-07 |