NR_4.0_56726.32

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	5J7L\|1\|AA (rep)	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
2	4YBB\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
3	5J8A\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
4	5JC9\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
5	4WOI\|1\|DA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
6	4WOI\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
7	5IT8\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
8	4V9P\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
9	4V9O\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
10	5J7L\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
11	4V9P\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
12	4V9P\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
13	4V9P\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
14	5J8A\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
15	4V9O\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
16	5J91\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
17	4V6C\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
18	5JC9\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
19	4V52\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
20	4V9O\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
21	4V7T\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
22	4V57\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
23	4WWW\|1\|QA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
24	4V52\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
25	4V57\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
26	4U27\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
27	5J88\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
28	4V7V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
29	4V54\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
30	4WF1\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
31	4YBB\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
32	4U1U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
33	4V64\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
34	4U26\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
35	4V53\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
36	4V9D\|1\|AA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
37	4U24\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
38	4V7S\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
39	4U25\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
40	5IT8\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
41	4V56\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
42	4V9D\|1\|BA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
43	4V54\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
44	4U27\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
45	4V64\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
46	4V53\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
47	4V56\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
48	4V7U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
49	4V55\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
50	4V50\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
51	4V9O\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
52	4WWW\|1\|XA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
53	4V4Q\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
54	4U20\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
55	4V55\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
56	4U1U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
57	4V50\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
58	4U1V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
59	4U25\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
60	4V6C\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
61	5J88\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
62	4V4Q\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
63	4U26\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
64	4V85\|1\|AA		16S rRNA				Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2014-07-09
65	5J91\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
66	4V7T\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
67	4WF1\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
68	4U24\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
69	4U1V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
70	4V6D\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
71	4U20\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
72	4V89\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-ray diffraction	3.7	2014-07-09
73	4V7S\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
74	4V6D\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
75	4V7V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
76	4V6E\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
77	4V9C\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA, mRNA	Escherichia coli	Bacteria	RF00177	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
78	4V9C\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA, mRNA	Escherichia coli	Bacteria	RF00177	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
79	4V7U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
80	4V6E\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
81	4V5B\|1\|BA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09
82	4V5B\|1\|DA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09
83	5J5B\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
84	4V4H\|1\|CA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
85	4V4H\|1\|AA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
86	5J5B\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
87	5AFI\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
88	5NWY\|1\|0	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	2017-07-19
89	3R8O\|1\|A		16S rRNA, messenger RNA				Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2011-06-01
90	3R8N\|1\|A		16S rRNA, messenger RNA				Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2011-06-01
91	5H5U\|1\|h	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Mechanistic insights into the alternative translation termination by ArfA and RF2	Electron microscopy	3.01	2017-01-25
92	5MDV\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	2016-12-14
93	5MGP\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	Electron microscopy	3.1	2016-12-14
94	6ENU\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	Electron microscopy	3.1	2017-11-22
95	6ENF\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	Electron microscopy	3.2	2017-11-22
96	5U9G\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, truncated mRNA	Escherichia coli	Bacteria	RF00177	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	Electron microscopy	3.2	2017-03-22
97	5U9F\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, truncated mRNA	Escherichia coli	Bacteria	RF00177	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	Electron microscopy	3.2	2017-03-22
98	3JCE\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
99	5UYM\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	2017-06-07
100	5MDW\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.06	2016-12-14
101	5MDZ\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S ribosome (empty A site)	Electron microscopy	3.1	2016-12-14
102	6C4I\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	Electron microscopy	3.24	2018-02-21
103	4V80\|1\|AA		16S rRNA				Crystal structure of the E. coli ribosome bound to CEM-101.	X-ray diffraction	3.3	2014-07-09
104	4V80\|1\|CA		16S rRNA				Crystal structure of the E. coli ribosome bound to CEM-101.	X-ray diffraction	3.3	2014-07-09
105	5O2R\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	Electron microscopy	3.4	2017-07-26
106	5LZD\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	Electron microscopy	3.4	2016-11-23
107	6BU8\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome with S1 domains 1 and 2 (Class 1)	Electron microscopy	3.5	2018-01-31
108	5LZE\|1\|a+ 5LZE\|1\|y+ 5LZE\|1\|v+ 5LZE\|1\|x	Small subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA	16S ribosomal RNA, fMetSec-tRNASec, SECIS mRNA, tRNAfMet	Escherichia coli	Bacteria	RF00177 + RF01852 + RF00005	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	Electron microscopy	3.5	2016-11-23
109	5MDY\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.35	2016-12-21
110	5U4I\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.5	2017-01-11
111	5UYL\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	Electron microscopy	3.6	2017-06-14
112	5KCR\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution	Electron microscopy	3.6	2016-08-17
113	5IQR\|1\|2	Small subunit ribosomal RNA	SSU rRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
114	3JBV\|1\|A	Small subunit ribosomal RNA	RNA (1530-MER)	Escherichia coli	Bacteria	RF00177	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	2016-01-27
115	5LZA\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA, SECIS mRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)	Electron microscopy	3.6	2016-11-23
116	5JTE\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	Electron microscopy	3.6	2016-07-20
117	5JU8\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	Electron microscopy	3.6	2016-07-20
118	3JCJ\|1\|g	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	Electron microscopy	3.7	2016-03-09
119	6ENJ\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)	Electron microscopy	3.7	2017-11-22
120	3J9Z\|1\|SA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	2015-07-01
121	3JCD\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	Electron microscopy	3.7	2016-01-13
122	5L3P\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	Electron microscopy	3.7	2016-07-20
123	5UYQ\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	Electron microscopy	3.8	2017-06-07
124	5UYP\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	Electron microscopy	3.9	2017-06-07
125	5UYK\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	Electron microscopy	3.9	2017-06-07
126	5KPW\|1\|26	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	Electron microscopy	3.9	2016-09-28
127	3J9Y\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	Electron microscopy	3.9	2015-04-15
128	5KCS\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution	Electron microscopy	3.9	2016-08-17
129	5KPS\|1\|27	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	Electron microscopy	3.9	2016-09-28
130	5UYN\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	Electron microscopy	4	2017-06-07
131	5KPX\|1\|26	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	Electron microscopy	3.9	2016-09-28
132	3JBU\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.64	2016-01-27
133	5NP6\|1\|D	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S structure prior to bypassing	Electron microscopy	3.6	2017-06-14
134	3JA1\|1\|SA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	2015-07-01
135	5U4J\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.7	2017-01-11

Release history

Release	3.10	3.11	3.12	3.13	3.14	3.15	3.16	3.17	3.18
Date	2018-02-23	2018-03-01	2018-03-08	2018-03-15	2018-03-22	2018-03-29	2018-04-06	2018-04-13	2018-04-20

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_56726.32	NR_4.0_56726.31	3.10	(134) 3J9Y\|1\|a, 3J9Z\|1\|SA, 3JA1\|1\|SA, 3JBU\|1\|A, 3JBV\|1\|A, 3JCD\|1\|a, 3JCE\|1\|a, 3JCJ\|1\|g, 3R8N\|1\|A, 3R8O\|1\|A, 4U1U\|1\|AA, 4U1U\|1\|CA, 4U1V\|1\|AA, 4U1V\|1\|CA, 4U20\|1\|AA, 4U20\|1\|CA, 4U24\|1\|AA, 4U24\|1\|CA, 4U25\|1\|AA, 4U25\|1\|CA, 4U26\|1\|AA, 4U26\|1\|CA, 4U27\|1\|AA, 4U27\|1\|CA, 4V4H\|1\|AA, 4V4H\|1\|CA, 4V4Q\|1\|AA, 4V4Q\|1\|CA, 4V50\|1\|AA, 4V50\|1\|CA, 4V52\|1\|AA, 4V52\|1\|CA, 4V53\|1\|AA, 4V53\|1\|CA, 4V54\|1\|AA, 4V54\|1\|CA, 4V55\|1\|AA, 4V55\|1\|CA, 4V56\|1\|AA, 4V56\|1\|CA, 4V57\|1\|AA, 4V57\|1\|CA, 4V5B\|1\|BA, 4V5B\|1\|DA, 4V64\|1\|AA, 4V64\|1\|CA, 4V6C\|1\|AA, 4V6C\|1\|CA, 4V6D\|1\|AA, 4V6D\|1\|CA, 4V6E\|1\|AA, 4V6E\|1\|CA, 4V7S\|1\|AA, 4V7S\|1\|CA, 4V7T\|1\|AA, 4V7T\|1\|CA, 4V7U\|1\|AA, 4V7U\|1\|CA, 4V7V\|1\|AA, 4V7V\|1\|CA, 4V80\|1\|AA, 4V80\|1\|CA, 4V85\|1\|AA, 4V89\|1\|AA, 4V9C\|1\|AA, 4V9C\|1\|CA, 4V9D\|1\|AA, 4V9D\|1\|BA, 4V9O\|1\|BA, 4V9O\|1\|DA, 4V9O\|1\|FA, 4V9O\|1\|HA, 4V9P\|1\|BA, 4V9P\|1\|DA, 4V9P\|1\|FA, 4V9P\|1\|HA, 4WF1\|1\|AA, 4WF1\|1\|CA, 4WOI\|1\|AA, 4WOI\|1\|DA, 4WWW\|1\|QA, 4WWW\|1\|XA, 4YBB\|1\|AA, 4YBB\|1\|BA, 5AFI\|1\|a, 5H5U\|1\|h, 5IQR\|1\|2, 5IT8\|1\|AA, 5IT8\|1\|BA, 5J5B\|1\|AA, 5J5B\|1\|BA, 5J7L\|1\|AA, 5J7L\|1\|BA, 5J88\|1\|AA, 5J88\|1\|BA, 5J8A\|1\|AA, 5J8A\|1\|BA, 5J91\|1\|AA, 5J91\|1\|BA, 5JC9\|1\|AA, 5JC9\|1\|BA, 5JTE\|1\|AA, 5JU8\|1\|AA, 5KCR\|1\|1a, 5KCS\|1\|1a, 5KPS\|1\|27, 5KPW\|1\|26, 5KPX\|1\|26, 5L3P\|1\|a, 5LZA\|1\|a, 5LZD\|1\|a, 5LZE\|1\|a+5LZE\|1\|y+5LZE\|1\|v+5LZE\|1\|x, 5MDV\|1\|2, 5MDW\|1\|2, 5MDY\|1\|2, 5MDZ\|1\|2, 5MGP\|1\|a, 5NP6\|1\|D, 5NWY\|1\|0, 5O2R\|1\|a, 5U4I\|1\|a, 5U4J\|1\|a, 5U9F\|1\|A, 5U9G\|1\|A, 5UYK\|1\|A, 5UYL\|1\|A, 5UYM\|1\|A, 5UYN\|1\|A, 5UYP\|1\|A, 5UYQ\|1\|A, 6BU8\|1\|A, 6ENF\|1\|a, 6ENJ\|1\|a, 6ENU\|1\|a	(1) 6C4I\|1\|a	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_56726.32	NR_4.0_56726.33	3.19	(135) 3J9Y\|1\|a, 3J9Z\|1\|SA, 3JA1\|1\|SA, 3JBU\|1\|A, 3JBV\|1\|A, 3JCD\|1\|a, 3JCE\|1\|a, 3JCJ\|1\|g, 3R8N\|1\|A, 3R8O\|1\|A, 4U1U\|1\|AA, 4U1U\|1\|CA, 4U1V\|1\|AA, 4U1V\|1\|CA, 4U20\|1\|AA, 4U20\|1\|CA, 4U24\|1\|AA, 4U24\|1\|CA, 4U25\|1\|AA, 4U25\|1\|CA, 4U26\|1\|AA, 4U26\|1\|CA, 4U27\|1\|AA, 4U27\|1\|CA, 4V4H\|1\|AA, 4V4H\|1\|CA, 4V4Q\|1\|AA, 4V4Q\|1\|CA, 4V50\|1\|AA, 4V50\|1\|CA, 4V52\|1\|AA, 4V52\|1\|CA, 4V53\|1\|AA, 4V53\|1\|CA, 4V54\|1\|AA, 4V54\|1\|CA, 4V55\|1\|AA, 4V55\|1\|CA, 4V56\|1\|AA, 4V56\|1\|CA, 4V57\|1\|AA, 4V57\|1\|CA, 4V5B\|1\|BA, 4V5B\|1\|DA, 4V64\|1\|AA, 4V64\|1\|CA, 4V6C\|1\|AA, 4V6C\|1\|CA, 4V6D\|1\|AA, 4V6D\|1\|CA, 4V6E\|1\|AA, 4V6E\|1\|CA, 4V7S\|1\|AA, 4V7S\|1\|CA, 4V7T\|1\|AA, 4V7T\|1\|CA, 4V7U\|1\|AA, 4V7U\|1\|CA, 4V7V\|1\|AA, 4V7V\|1\|CA, 4V80\|1\|AA, 4V80\|1\|CA, 4V85\|1\|AA, 4V89\|1\|AA, 4V9C\|1\|AA, 4V9C\|1\|CA, 4V9D\|1\|AA, 4V9D\|1\|BA, 4V9O\|1\|BA, 4V9O\|1\|DA, 4V9O\|1\|FA, 4V9O\|1\|HA, 4V9P\|1\|BA, 4V9P\|1\|DA, 4V9P\|1\|FA, 4V9P\|1\|HA, 4WF1\|1\|AA, 4WF1\|1\|CA, 4WOI\|1\|AA, 4WOI\|1\|DA, 4WWW\|1\|QA, 4WWW\|1\|XA, 4YBB\|1\|AA, 4YBB\|1\|BA, 5AFI\|1\|a, 5H5U\|1\|h, 5IQR\|1\|2, 5IT8\|1\|AA, 5IT8\|1\|BA, 5J5B\|1\|AA, 5J5B\|1\|BA, 5J7L\|1\|AA, 5J7L\|1\|BA, 5J88\|1\|AA, 5J88\|1\|BA, 5J8A\|1\|AA, 5J8A\|1\|BA, 5J91\|1\|AA, 5J91\|1\|BA, 5JC9\|1\|AA, 5JC9\|1\|BA, 5JTE\|1\|AA, 5JU8\|1\|AA, 5KCR\|1\|1a, 5KCS\|1\|1a, 5KPS\|1\|27, 5KPW\|1\|26, 5KPX\|1\|26, 5L3P\|1\|a, 5LZA\|1\|a, 5LZD\|1\|a, 5LZE\|1\|a+5LZE\|1\|y+5LZE\|1\|v+5LZE\|1\|x, 5MDV\|1\|2, 5MDW\|1\|2, 5MDY\|1\|2, 5MDZ\|1\|2, 5MGP\|1\|a, 5NP6\|1\|D, 5NWY\|1\|0, 5O2R\|1\|a, 5U4I\|1\|a, 5U4J\|1\|a, 5U9F\|1\|A, 5U9G\|1\|A, 5UYK\|1\|A, 5UYL\|1\|A, 5UYM\|1\|A, 5UYN\|1\|A, 5UYP\|1\|A, 5UYQ\|1\|A, 6BU8\|1\|A, 6C4I\|1\|a, 6ENF\|1\|a, 6ENJ\|1\|a, 6ENU\|1\|a	(0)	(3) 5WDT\|1\|a, 5WE4\|1\|a, 5WE6\|1\|a

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	5U4J\|1\|a	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.7	299
2	5U4I\|1\|a	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.5	1523
3	5IQR\|1\|2	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	1522
4	4V9D\|1\|BA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1539
5	3R8O\|1\|A	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1539
6	4V9C\|1\|AA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	1539
7	4WOI\|1\|DA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1539
8	5LZD\|1\|a	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	ELECTRON MICROSCOPY	3.4	1528
9	5LZE\|1\|a+ 5LZE\|1\|y+ 5LZE\|1\|v+ 5LZE\|1\|x	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	ELECTRON MICROSCOPY	3.5	1528
10	5AFI\|1\|a	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	1528
11	6BU8\|1\|A	70S ribosome with S1 domains 1 and 2 (Class 1)	ELECTRON MICROSCOPY	3.5	1539
12	5UYM\|1\|A	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	1539
13	5UYQ\|1\|A	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	ELECTRON MICROSCOPY	3.8	1539
14	5KPX\|1\|26	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	ELECTRON MICROSCOPY	3.9	1539
15	5O2R\|1\|a	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	ELECTRON MICROSCOPY	3.4	1539
16	6ENJ\|1\|a	Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)	ELECTRON MICROSCOPY	3.7	1539
17	3JCE\|1\|a	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	1533
18	4V6E\|1\|AA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	1533
19	4V6D\|1\|AA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	1533
20	4V9C\|1\|CA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	1538
21	4WOI\|1\|AA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1538
22	3R8N\|1\|A	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1538
23	4V9D\|1\|AA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1538
24	3JCJ\|1\|g	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	ELECTRON MICROSCOPY	3.7	1539
25	5JTE\|1\|AA	Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	1539
26	5JU8\|1\|AA	Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	1539
27	5KCR\|1\|1a	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution	ELECTRON MICROSCOPY	3.6	1539
28	5NWY\|1\|0	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	1539
29	6C4I\|1\|a	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	ELECTRON MICROSCOPY	3.24	1523
30	5MDV\|1\|2	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	1523
31	5MDZ\|1\|2	Structure of the 70S ribosome (empty A site)	ELECTRON MICROSCOPY	3.1	1523
32	5MDW\|1\|2	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.06	1523
33	5MDY\|1\|2	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.35	1523
34	5LZA\|1\|a	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)	ELECTRON MICROSCOPY	3.6	1532
35	5UYK\|1\|A	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	ELECTRON MICROSCOPY	3.9	1539
36	5UYL\|1\|A	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	ELECTRON MICROSCOPY	3.6	1539
37	5UYN\|1\|A	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	ELECTRON MICROSCOPY	4	1539
38	5UYP\|1\|A	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	ELECTRON MICROSCOPY	3.9	1539
39	5KPS\|1\|27	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	ELECTRON MICROSCOPY	3.9	1539
40	5KPW\|1\|26	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	ELECTRON MICROSCOPY	3.9	1539
41	5U9G\|1\|A	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	ELECTRON MICROSCOPY	3.2	1539
42	5U9F\|1\|A	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	ELECTRON MICROSCOPY	3.2	1539
43	5L3P\|1\|a	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	ELECTRON MICROSCOPY	3.7	1528
44	5KCS\|1\|1a	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution	ELECTRON MICROSCOPY	3.9	1528
45	3J9Y\|1\|a	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	ELECTRON MICROSCOPY	3.9	1528
46	6ENF\|1\|a	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	ELECTRON MICROSCOPY	3.2	1539
47	6ENU\|1\|a	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	ELECTRON MICROSCOPY	3.1	1539
48	5MGP\|1\|a	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	ELECTRON MICROSCOPY	3.1	1539
49	5NP6\|1\|D	70S structure prior to bypassing	ELECTRON MICROSCOPY	3.6	1528
50	5H5U\|1\|h	Mechanistic insights into the alternative translation termination by ArfA and RF2	ELECTRON MICROSCOPY	3.01	1534
51	3JCD\|1\|a	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	ELECTRON MICROSCOPY	3.7	1533
52	3J9Z\|1\|SA	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	1542
53	3JBU\|1\|A	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.64	1530
54	3JBV\|1\|A	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	1530
55	3JA1\|1\|SA	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	1542
56	4V6E\|1\|CA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	1530
57	4V6D\|1\|CA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	1530
58	4V50\|1\|AA	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	1530
59	4V50\|1\|CA	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	1530
60	4V57\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	1530
61	4V55\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	1530
62	4V53\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	1530
63	4V52\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	1530
64	4V64\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	1530
65	4V54\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	1530
66	4V4H\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	1530
67	4V4Q\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	1530
68	4V56\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	1530
69	4V5B\|1\|BA	Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	1530
70	4WWW\|1\|XA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	1530
71	4V80\|1\|CA	Crystal structure of the E. coli ribosome bound to CEM-101.	X-RAY DIFFRACTION	3.3	1530
72	4V7S\|1\|CA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	1530
73	4V7V\|1\|CA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	1530
74	4V7T\|1\|CA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	1530
75	4V6C\|1\|CA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	1530
76	4V7U\|1\|CA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	1530
77	4U1V\|1\|CA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1539
78	4U20\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1539
79	4U1U\|1\|CA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1539
80	4WF1\|1\|CA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	1539
81	4U27\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1539
82	4U25\|1\|CA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1539
83	4U26\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1539
84	4U24\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1539
85	4YBB\|1\|BA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1522
86	5J88\|1\|BA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	1522
87	5IT8\|1\|BA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	1522
88	5J91\|1\|BA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1522
89	5J5B\|1\|BA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1522
90	5J8A\|1\|BA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	1522
91	5J7L\|1\|BA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1522
92	5JC9\|1\|BA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	1522
93	4V9O\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
94	4V9O\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
95	4V9O\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
96	4V9P\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
97	5J88\|1\|AA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	1523
98	5JC9\|1\|AA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	1523
99	5J7L\|1\|AA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1523
100	5J8A\|1\|AA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	1523
101	5IT8\|1\|AA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	1523
102	5J5B\|1\|AA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1523
103	5J91\|1\|AA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1523
104	4YBB\|1\|AA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1523
105	4U24\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1538
106	4U26\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1538
107	4U25\|1\|AA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1538
108	4U27\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1538
109	4U1V\|1\|AA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1538
110	4U20\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1538
111	4U1U\|1\|AA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1538
112	4WF1\|1\|AA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	1538
113	4V7U\|1\|AA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	1533
114	4V6C\|1\|AA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	1533
115	4V7T\|1\|AA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	1533
116	4V7S\|1\|AA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	1533
117	4V80\|1\|AA	Crystal structure of the E. coli ribosome bound to CEM-101.	X-RAY DIFFRACTION	3.3	1533
118	4WWW\|1\|QA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	1533
119	4V7V\|1\|AA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	1533
120	4V9P\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
121	4V9P\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
122	4V9O\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
123	4V89\|1\|AA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-RAY DIFFRACTION	3.7	1532
124	4V85\|1\|AA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	1532
125	4V9P\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
126	4V56\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	1530
127	4V57\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	1530
128	4V55\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	1530
129	4V53\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	1530
130	4V52\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	1530
131	4V64\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	1530
132	4V54\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	1530
133	4V4H\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	1530
134	4V4Q\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	1530
135	4V5B\|1\|DA	Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	1530

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_56726.32 Obsolete

Release history

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