#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J7L|1|AA (rep)Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
24YBB|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
35J8A|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
45JC9|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
54WOI|1|DASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
64WOI|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
75IT8|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
84V9P|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
94V9O|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
105J7L|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
114V9P|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
124V9P|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
134V9P|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
145J8A|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
154V9O|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
165J91|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
176I7V|1|AASmall subunit ribosomal RNA16S ribosmal RNAEscherichia coliBacteriaRF00177Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
184V6C|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
195JC9|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
204V52|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
214V9O|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
224V7T|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
234V57|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
244WWW|1|QASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
254V52|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
264V57|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
274U27|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
285J88|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
294V7V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
304V54|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
314WF1|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
324YBB|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
334U1U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
344V64|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
354U26|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
364V53|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
374V9D|1|AASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
386I7V|1|BASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
394U24|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
404V7S|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
414U25|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
425IT8|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
434V56|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
444V9D|1|BASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
454V54|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
464U27|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
474V64|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
484V53|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
494V56|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
504V7U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
514V55|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
524V50|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
534V9O|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
544WWW|1|XASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
554V4Q|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
564U20|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
574V55|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
584U1U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
594V50|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
604U1V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
614U25|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
624V6C|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
636BY1|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli pH03H9 complexX-ray diffraction3.942019-02-27
645J88|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
654V4Q|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
666BY1|1|BASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF00177E. coli pH03H9 complexX-ray diffraction3.942019-02-27
674U26|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
684V85|1|AA16S rRNACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
695J91|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
704V7T|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
714WF1|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
724U24|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
734U1V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
744V6D|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
754U20|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
764V89|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.72014-07-09
774V7S|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
784V6D|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
794V7V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
804V6E|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
814V9C|1|CASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
824V9C|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
834V7U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
844V6E|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
854V5B|1|BASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
864V5B|1|DASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
875J5B|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
884V4H|1|CASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
894V4H|1|AASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
905J5B|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
915AFI|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF001772.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
925NWY|1|0Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF001772.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.92017-07-19
933R8O|1|A16S rRNA, messenger RNAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32011-06-01
943R8N|1|A16S rRNA, messenger RNAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32011-06-01
956H4N|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy32018-09-05
966ORE|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Release complex 70SElectron microscopy2.92019-06-19
975H5U|1|hSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.012017-01-25
985WDT|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
995WFS|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
1005MDV|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
1015MGP|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.12016-12-14
1026ENU|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.12017-11-22
1035WE4|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
1046ENF|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.22017-11-22
1055U9G|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
1065U9F|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
1073JCE|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
1085UYM|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
1095MDW|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.062016-12-14
1105MDZ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome (empty A site)Electron microscopy3.12016-12-14
1116C4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.242018-02-21
1124V80|1|AA16S rRNACrystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.32014-07-09
1134V80|1|CA16S rRNACrystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.32014-07-09
1145O2R|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.42017-07-26
1155WFK|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
1165LZD|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
1175WE6|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
1186BU8|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
1195LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xSmall subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA16S ribosomal RNA, fMetSec-tRNASec, SECIS mRNA, tRNAfMetEscherichia coliBacteriaRF00177 + RF01852 + RF00005Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.52016-11-23
1205MDY|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.352016-12-21
1215U4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
1225UYL|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.62017-06-14
1235KCR|1|1aSmall subunit ribosomal RNA16S Ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionElectron microscopy3.62016-08-17
1245IQR|1|2Small subunit ribosomal RNASSU rRNAEscherichia coliBacteriaRF00177Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
1253JBV|1|ASmall subunit ribosomal RNARNA (1530-MER)Escherichia coliBacteriaRF00177Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
1265WF0|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.62018-05-02
1275LZA|1|aSmall subunit ribosomal RNA16S ribosomal RNA, SECIS mRNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.62016-11-23
1286OSQ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.52019-06-26
1295JTE|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.62016-07-20
1305JU8|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.62016-07-20
1313JCJ|1|gSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
1326ENJ|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)Electron microscopy3.72017-11-22
1333J9Z|1|SASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
1343JCD|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.72016-01-13
1355L3P|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.72016-07-20
1366DNC|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.72018-07-04
1376OSK|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 accommodated 70S complex at 60 msElectron microscopy3.62019-06-26
1386ORL|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.52019-06-19
1395UYQ|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.82017-06-07
1406GXM|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)Electron microscopy3.82018-08-22
1416GWT|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)Electron microscopy3.82018-08-15
1426Q9A|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeElectron microscopy3.72019-04-17
1436OUO|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF2 accommodated state bound 70S complex at long incubation timeElectron microscopy3.72019-06-19
1445UYP|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.92017-06-07
1456GXO|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)Electron microscopy3.92018-08-15
1466GXN|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)Electron microscopy3.92018-08-15
1475UYK|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.92017-06-07
1486O9J|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S Elongation Competent RibosomeElectron microscopy3.92019-05-29
1495KPW|1|26Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.92016-09-28
1503J9Y|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
1515KCS|1|1aSmall subunit ribosomal RNA16S Ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionElectron microscopy3.92016-08-17
1525KPS|1|27Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.92016-09-28
1535UYN|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy42017-06-07
1546O9K|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S initiation complexElectron microscopy42019-05-29
1555KPX|1|26Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.92016-09-28
1566Q97|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeElectron microscopy3.92019-03-13
1573JBU|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.642016-01-27
1586OT3|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF2 accommodated state bound Release complex 70S at 24 msElectron microscopy3.92019-06-19
1595NP6|1|DSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S structure prior to bypassingElectron microscopy3.62017-06-14
1603JA1|1|SASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
1616NQB|1|ASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Role of Era in Assembly and Homeostasis of the Ribosomal Small SubunitElectron microscopy3.82019-06-26
1625U4J|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.72017-01-11

Release history

Release3.803.813.823.833.843.853.863.873.883.893.903.913.92
Date2019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_56726.45NR_4.0_56726.443.80(159) 3J9Y|1|a, 3J9Z|1|SA, 3JA1|1|SA, 3JBU|1|A, 3JBV|1|A, 3JCD|1|a, 3JCE|1|a, 3JCJ|1|g, 3R8N|1|A, 3R8O|1|A, 4U1U|1|AA, 4U1U|1|CA, 4U1V|1|AA, 4U1V|1|CA, 4U20|1|AA, 4U20|1|CA, 4U24|1|AA, 4U24|1|CA, 4U25|1|AA, 4U25|1|CA, 4U26|1|AA, 4U26|1|CA, 4U27|1|AA, 4U27|1|CA, 4V4H|1|AA, 4V4H|1|CA, 4V4Q|1|AA, 4V4Q|1|CA, 4V50|1|AA, 4V50|1|CA, 4V52|1|AA, 4V52|1|CA, 4V53|1|AA, 4V53|1|CA, 4V54|1|AA, 4V54|1|CA, 4V55|1|AA, 4V55|1|CA, 4V56|1|AA, 4V56|1|CA, 4V57|1|AA, 4V57|1|CA, 4V5B|1|BA, 4V5B|1|DA, 4V64|1|AA, 4V64|1|CA, 4V6C|1|AA, 4V6C|1|CA, 4V6D|1|AA, 4V6D|1|CA, 4V6E|1|AA, 4V6E|1|CA, 4V7S|1|AA, 4V7S|1|CA, 4V7T|1|AA, 4V7T|1|CA, 4V7U|1|AA, 4V7U|1|CA, 4V7V|1|AA, 4V7V|1|CA, 4V80|1|AA, 4V80|1|CA, 4V85|1|AA, 4V89|1|AA, 4V9C|1|AA, 4V9C|1|CA, 4V9D|1|AA, 4V9D|1|BA, 4V9O|1|BA, 4V9O|1|DA, 4V9O|1|FA, 4V9O|1|HA, 4V9P|1|BA, 4V9P|1|DA, 4V9P|1|FA, 4V9P|1|HA, 4WF1|1|AA, 4WF1|1|CA, 4WOI|1|AA, 4WOI|1|DA, 4WWW|1|QA, 4WWW|1|XA, 4YBB|1|AA, 4YBB|1|BA, 5AFI|1|a, 5H5U|1|h, 5IQR|1|2, 5IT8|1|AA, 5IT8|1|BA, 5J5B|1|AA, 5J5B|1|BA, 5J7L|1|AA, 5J7L|1|BA, 5J88|1|AA, 5J88|1|BA, 5J8A|1|AA, 5J8A|1|BA, 5J91|1|AA, 5J91|1|BA, 5JC9|1|AA, 5JC9|1|BA, 5JTE|1|AA, 5JU8|1|AA, 5KCR|1|1a, 5KCS|1|1a, 5KPS|1|27, 5KPW|1|26, 5KPX|1|26, 5L3P|1|a, 5LZA|1|a, 5LZD|1|a, 5LZE|1|a+5LZE|1|y+5LZE|1|v+5LZE|1|x, 5MDV|1|2, 5MDW|1|2, 5MDY|1|2, 5MDZ|1|2, 5MGP|1|a, 5NP6|1|D, 5NWY|1|0, 5O2R|1|a, 5U4I|1|a, 5U4J|1|a, 5U9F|1|A, 5U9G|1|A, 5UYK|1|A, 5UYL|1|A, 5UYM|1|A, 5UYN|1|A, 5UYP|1|A, 5UYQ|1|A, 5WDT|1|a, 5WE4|1|a, 5WE6|1|a, 5WF0|1|a, 5WFK|1|a, 5WFS|1|a, 6BU8|1|A, 6BY1|1|AA, 6BY1|1|BA, 6C4I|1|a, 6DNC|1|A, 6ENF|1|a, 6ENJ|1|a, 6ENU|1|a, 6GWT|1|a, 6GXM|1|a, 6GXN|1|a, 6GXO|1|a, 6H4N|1|a, 6I7V|1|AA, 6I7V|1|BA, 6O9J|1|a, 6O9K|1|a, 6ORE|1|2, 6ORL|1|2, 6OT3|1|2, 6OUO|1|2, 6Q97|1|2, 6Q9A|1|2(3) 6NQB|1|A, 6OSK|1|2, 6OSQ|1|2(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_56726.45NR_4.0_56726.463.93(162) 3J9Y|1|a, 3J9Z|1|SA, 3JA1|1|SA, 3JBU|1|A, 3JBV|1|A, 3JCD|1|a, 3JCE|1|a, 3JCJ|1|g, 3R8N|1|A, 3R8O|1|A, 4U1U|1|AA, 4U1U|1|CA, 4U1V|1|AA, 4U1V|1|CA, 4U20|1|AA, 4U20|1|CA, 4U24|1|AA, 4U24|1|CA, 4U25|1|AA, 4U25|1|CA, 4U26|1|AA, 4U26|1|CA, 4U27|1|AA, 4U27|1|CA, 4V4H|1|AA, 4V4H|1|CA, 4V4Q|1|AA, 4V4Q|1|CA, 4V50|1|AA, 4V50|1|CA, 4V52|1|AA, 4V52|1|CA, 4V53|1|AA, 4V53|1|CA, 4V54|1|AA, 4V54|1|CA, 4V55|1|AA, 4V55|1|CA, 4V56|1|AA, 4V56|1|CA, 4V57|1|AA, 4V57|1|CA, 4V5B|1|BA, 4V5B|1|DA, 4V64|1|AA, 4V64|1|CA, 4V6C|1|AA, 4V6C|1|CA, 4V6D|1|AA, 4V6D|1|CA, 4V6E|1|AA, 4V6E|1|CA, 4V7S|1|AA, 4V7S|1|CA, 4V7T|1|AA, 4V7T|1|CA, 4V7U|1|AA, 4V7U|1|CA, 4V7V|1|AA, 4V7V|1|CA, 4V80|1|AA, 4V80|1|CA, 4V85|1|AA, 4V89|1|AA, 4V9C|1|AA, 4V9C|1|CA, 4V9D|1|AA, 4V9D|1|BA, 4V9O|1|BA, 4V9O|1|DA, 4V9O|1|FA, 4V9O|1|HA, 4V9P|1|BA, 4V9P|1|DA, 4V9P|1|FA, 4V9P|1|HA, 4WF1|1|AA, 4WF1|1|CA, 4WOI|1|AA, 4WOI|1|DA, 4WWW|1|QA, 4WWW|1|XA, 4YBB|1|AA, 4YBB|1|BA, 5AFI|1|a, 5H5U|1|h, 5IQR|1|2, 5IT8|1|AA, 5IT8|1|BA, 5J5B|1|AA, 5J5B|1|BA, 5J7L|1|AA, 5J7L|1|BA, 5J88|1|AA, 5J88|1|BA, 5J8A|1|AA, 5J8A|1|BA, 5J91|1|AA, 5J91|1|BA, 5JC9|1|AA, 5JC9|1|BA, 5JTE|1|AA, 5JU8|1|AA, 5KCR|1|1a, 5KCS|1|1a, 5KPS|1|27, 5KPW|1|26, 5KPX|1|26, 5L3P|1|a, 5LZA|1|a, 5LZD|1|a, 5LZE|1|a+5LZE|1|y+5LZE|1|v+5LZE|1|x, 5MDV|1|2, 5MDW|1|2, 5MDY|1|2, 5MDZ|1|2, 5MGP|1|a, 5NP6|1|D, 5NWY|1|0, 5O2R|1|a, 5U4I|1|a, 5U4J|1|a, 5U9F|1|A, 5U9G|1|A, 5UYK|1|A, 5UYL|1|A, 5UYM|1|A, 5UYN|1|A, 5UYP|1|A, 5UYQ|1|A, 5WDT|1|a, 5WE4|1|a, 5WE6|1|a, 5WF0|1|a, 5WFK|1|a, 5WFS|1|a, 6BU8|1|A, 6BY1|1|AA, 6BY1|1|BA, 6C4I|1|a, 6DNC|1|A, 6ENF|1|a, 6ENJ|1|a, 6ENU|1|a, 6GWT|1|a, 6GXM|1|a, 6GXN|1|a, 6GXO|1|a, 6H4N|1|a, 6I7V|1|AA, 6I7V|1|BA, 6NQB|1|A, 6O9J|1|a, 6O9K|1|a, 6ORE|1|2, 6ORL|1|2, 6OSK|1|2, 6OSQ|1|2, 6OT3|1|2, 6OUO|1|2, 6Q97|1|2, 6Q9A|1|2(0) (4) 6OFX|1|3, 6OG7|1|3, 6OGF|1|3, 6OGI|1|3

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15U4J|1|aStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.7299
25U4I|1|aStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.51523
35IQR|1|2Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY31522
44V9C|1|AAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31539
54WOI|1|DA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31539
63R8O|1|AStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
74V9D|1|BAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
83JCJ|1|gStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.71539
95JTE|1|AACryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.61539
105JU8|1|AACryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.61539
115KCR|1|1aCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.61539
126OSK|1|2RF1 accommodated 70S complex at 60 msELECTRON MICROSCOPY3.61523
136OSQ|1|2RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.51523
146ORE|1|2Release complex 70SELECTRON MICROSCOPY2.91523
156C4I|1|aConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.241523
165MDV|1|2Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.971523
175MDZ|1|2Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.11523
185MDW|1|2Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.061523
195MDY|1|2Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.351523
205NWY|1|02.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.91539
216Q9A|1|2Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeELECTRON MICROSCOPY3.71523
225KPS|1|27Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.91539
235KPW|1|26Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.91539
245UYP|1|A70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.91539
255UYN|1|A70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY41539
265UYK|1|A70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.91539
275UYL|1|A70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.61539
285LZA|1|aStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.61532
296H4N|1|aStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY31534
305MGP|1|aStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.11539
315WF0|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.61529
325WFK|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.41531
336ENU|1|aPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.11539
346ENF|1|aCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.21539
355U9G|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.21539
365U9F|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.21539
376DNC|1|AE.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.71539
385L3P|1|aCryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.71528
395KCS|1|1aCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.91528
403J9Y|1|aCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.91528
416GXN|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)ELECTRON MICROSCOPY3.91539
426GXM|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)ELECTRON MICROSCOPY3.81539
436GWT|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)ELECTRON MICROSCOPY3.81539
445O2R|1|aCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.41539
456ENJ|1|aPolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.71539
465WE6|1|a70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.41528
475WDT|1|a70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY31529
485WE4|1|a70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.11529
495WFS|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY31529
505AFI|1|a2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.91528
515UYM|1|A70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.21539
526BU8|1|A70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.51539
535UYQ|1|A70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.81539
545LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.51528
555LZD|1|aStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.41528
565KPX|1|26Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.91539
576ORL|1|2RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.51523
586OUO|1|2RF2 accommodated state bound 70S complex at long incubation timeELECTRON MICROSCOPY3.71523
596OT3|1|2RF2 accommodated state bound Release complex 70S at 24 msELECTRON MICROSCOPY3.91523
603J9Z|1|SAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.61542
613JCD|1|aStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.71533
625H5U|1|hMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.011534
635NP6|1|D70S structure prior to bypassingELECTRON MICROSCOPY3.61528
646Q97|1|2Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.91523
653JBU|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.641530
666O9K|1|a70S initiation complexELECTRON MICROSCOPY41539
673JCE|1|aStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.21533
686BY1|1|BAE. coli pH03H9 complexX-RAY DIFFRACTION3.941541
696BY1|1|AAE. coli pH03H9 complexX-RAY DIFFRACTION3.941540
704V6E|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.711533
714V6D|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.811533
724WOI|1|AA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31538
734V9C|1|CAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31538
744V9D|1|AAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
753R8N|1|AStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
764V9O|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
774V9O|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
786GXO|1|aCryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)ELECTRON MICROSCOPY3.91539
793JBV|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.321530
803JA1|1|SAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.61542
814V6E|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.711530
824V6D|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.811530
834V50|1|AACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
844V50|1|CACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
854V5B|1|BAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.741530
864V56|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.931530
874V4Q|1|AACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
886O9J|1|a70S Elongation Competent RibosomeELECTRON MICROSCOPY3.91530
894V4H|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
904V54|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
914V64|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
924V52|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
934V53|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.541530
944V55|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION41530
954V57|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
964WWW|1|XACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11530
974V80|1|CACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.31530
984V7S|1|CACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251530
994V7V|1|CACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291530
1004V7T|1|CACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191530
1014V6C|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191530
1024V7U|1|CACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11530
1036I7V|1|BARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91533
1044U24|1|CACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91539
1054U26|1|CACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81539
1064U25|1|CACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91539
1074U27|1|CACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81539
1084U1V|1|CACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31539
1094U20|1|CACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91539
1104U1U|1|CACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951539
1114WF1|1|CACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091539
1124YBB|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11522
1135J88|1|BAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321522
1145IT8|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121522
1155J7L|1|BAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31522
1165J8A|1|BAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11522
1175J91|1|BAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961522
1185J5B|1|BAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81522
1195JC9|1|BAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031522
1204V9P|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1214V9O|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1224V9P|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1234WF1|1|AACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091538
1244U1V|1|AACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31538
1254U20|1|AACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91538
1264U1U|1|AACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951538
1274U27|1|AACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81538
1284U25|1|AACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91538
1294U26|1|AACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81538
1304U24|1|AACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91538
1316I7V|1|AARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91522
1324YBB|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11523
1335J91|1|AAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961523
1345J5B|1|AAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81523
1355J8A|1|AAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11523
1365J7L|1|AAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31523
1375IT8|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121523
1385JC9|1|AAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031523
1395J88|1|AAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321523
1404V7U|1|AACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11533
1414V7V|1|AACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291533
1424V6C|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191533
1434V7T|1|AACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191533
1444V7S|1|AACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251533
1454V80|1|AACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.31533
1464WWW|1|QACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11533
1474V9O|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1484V9P|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1494V9P|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1504V56|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.931530
1514V57|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
1524V52|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
1534V55|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION41530
1544V53|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.541530
1554V4Q|1|CACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
1564V4H|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
1574V54|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
1584V64|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
1594V5B|1|DAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.741530
1604V85|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.21532
1614V89|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.71532
1626NQB|1|ARole of Era in Assembly and Homeostasis of the Ribosomal Small SubunitELECTRON MICROSCOPY3.81341

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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