#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12NR0|1|E (rep)leucyl tRNACrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-ray diffraction3.92007-05-15
22NR0|1|Gleucyl tRNACrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-ray diffraction3.92007-05-15
32NR0|1|Hleucyl tRNACrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-ray diffraction3.92007-05-15
42NRE|1|Fleucyl tRNACrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-ray diffraction42007-05-15
54V8C|1|CBMRNA, TRNA-LEUCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
64V8B|1|ABTransfer RNAMRNA, TRNA-LEUEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
72NR0|1|Fleucyl tRNACrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-ray diffraction3.92007-05-15
84V8C|1|DBMRNA, TRNA-LEUCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
94WSM|1|2KTransfer RNAmRNA, tRNA-LeuEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-ray diffraction3.32015-06-10
104WSM|1|2LTransfer RNAmRNA, tRNA-LeuEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-ray diffraction3.32015-06-10
114V8B|1|CBTransfer RNAMRNA, TRNA-LEUEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
124V87|1|BBMRNA, TRNA-LEUsynthetic constructCrystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
134WSM|1|3LTransfer RNAtRNA-LeuEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-ray diffraction3.32015-06-10
144WSM|1|1LTransfer RNAmRNA, tRNA-LeuEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-ray diffraction3.32015-06-10
154WSM|1|1KTransfer RNAmRNA, tRNA-LeuEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-ray diffraction3.32015-06-10
164V87|1|CBMRNA, TRNA-LEUsynthetic constructCrystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
174WSM|1|3KTransfer RNAtRNA-LeuEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-ray diffraction3.32015-06-10

Release history

Release2.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.92
Date2015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_62979.1NR_all_31492.12.27(11) 2NR0|1|E, 2NR0|1|F, 2NR0|1|G, 2NR0|1|H, 2NRE|1|F, 4V87|1|BB, 4V87|1|CB, 4V8B|1|AB, 4V8B|1|CB, 4V8C|1|CB, 4V8C|1|DB(6) 4WSM|1|1K, 4WSM|1|1L, 4WSM|1|2K, 4WSM|1|2L, 4WSM|1|3K, 4WSM|1|3L(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
12NR0|1|GCrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-RAY DIFFRACTION3.967
22NR0|1|FCrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-RAY DIFFRACTION3.974
32NR0|1|HCrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-RAY DIFFRACTION3.965
42NR0|1|ECrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-RAY DIFFRACTION3.981
52NRE|1|FCrystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNAX-RAY DIFFRACTION456
64WSM|1|2KComplex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-RAY DIFFRACTION3.373
74WSM|1|1KComplex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-RAY DIFFRACTION3.383
84V8B|1|ABCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION387
94V87|1|BBCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.187
104V8C|1|CBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.387
114V8B|1|CBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION387
124V87|1|CBCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.187
134V8C|1|DBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.387
144WSM|1|1LComplex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-RAY DIFFRACTION3.383
154WSM|1|2LComplex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-RAY DIFFRACTION3.374
164WSM|1|3LComplex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-RAY DIFFRACTION3.375
174WSM|1|3KComplex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sitesX-RAY DIFFRACTION3.377

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0229 s