#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14QI2|1|E (rep)RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-ray diffraction32014-07-16
24QI2|1|FRNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-ray diffraction32014-07-16
34QI2|1|GRNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-ray diffraction32014-07-16
44QI2|1|HRNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-ray diffraction32014-07-16
54QIK|1|C+ 4QIK|1|D5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3'Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplexX-ray diffraction1.92014-07-16

Release history

Release2.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.92
Date2015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_66070.2NR_all_66070.12.35(5) 4QI2|1|E, 4QI2|1|F, 4QI2|1|G, 4QI2|1|H, 4QIK|1|C+4QIK|1|D(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_66070.2NR_4.0_13250.12.93(1) 4QIK|1|C+4QIK|1|D(4) 4QI2|1|E, 4QI2|1|F, 4QI2|1|G, 4QI2|1|H(0)
NR_4.0_66070.2NR_4.0_19645.12.93(4) 4QI2|1|E, 4QI2|1|F, 4QI2|1|G, 4QI2|1|H(1) 4QIK|1|C+4QIK|1|D(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14QI2|1|EX-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-RAY DIFFRACTION319
24QI2|1|FX-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-RAY DIFFRACTION318
34QI2|1|HX-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-RAY DIFFRACTION320
44QI2|1|GX-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-RAY DIFFRACTION319
54QIK|1|C+ 4QIK|1|DCrystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplexX-RAY DIFFRACTION1.918

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0302 s