#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15J7L|1|DA (rep)Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction328972016-07-27
25J8A|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.128972016-07-06
35JC9|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0328972016-07-06
44YBB|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.128972015-03-18
55IT8|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1228972016-07-27
64WOI|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction328972015-08-05
74WOI|1|CALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction328972015-08-05
86I7V|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.928972018-12-05
95J91|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9628972016-07-06
104V9P|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
115J88|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3228972016-07-06
124V9P|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
134V9P|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
144V9P|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
156LKQ|1|tLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541The Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-ray diffraction3.128502020-05-06
164V9D|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction328972014-07-09
174V9O|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
184V9O|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
194WWW|1|RALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.128542014-12-24
204V9O|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
214V6C|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1928542014-07-09
225J7L|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction328982016-07-27
234V7T|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1928542014-07-09
244U27|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.828972014-07-30
254WF1|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0928972014-11-05
265J8A|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.128982016-07-06
275JC9|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0328982016-07-06
284V7U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.128542014-07-09
294V7V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2928542014-07-09
304V52|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2128412014-07-09
314U24|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.928972014-07-30
324U25|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.928972014-07-30
334V9D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction328962014-07-09
344U26|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.828972014-07-30
354V7S|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2528542014-07-09
364V57|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.528412014-07-09
374V52|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2128412014-07-09
384V57|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.528412014-07-09
394V9O|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
404U1U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9528972014-07-30
414V85|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.228532014-07-09
424V54|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.328412014-07-09
434V64|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.528412014-07-09
444V50|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2228412014-07-09
454V54|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.328412014-07-09
464V64|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.528412014-07-09
476BY1|1|CALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli pH03H9 complexX-ray diffraction3.9428672019-02-27
484V53|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.5428412014-07-09
494V50|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2228412014-07-09
504YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.128982015-03-18
514U1V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction328972014-07-30
525J88|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3228982016-07-06
534V53|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.5428412014-07-09
544V9C|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.328972014-07-09
554V56|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.9328412014-07-09
564U20|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.928972014-07-30
574V56|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.9328412014-07-09
586I7V|1|CALarge subunit ribosomal RNA23S ribsomal RNAEscherichia coliBacteriaRF02541Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.928982018-12-05
596BY1|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli pH03H9 complexX-ray diffraction3.9428692019-02-27
604U27|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.828972014-07-30
614V55|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction428412014-07-09
624V4Q|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4628412014-07-09
634V55|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction428412014-07-09
644V4Q|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4628412014-07-09
654V6D|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.8128542014-07-09
664U25|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.928972014-07-30
674U1U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9528972014-07-30
684V9C|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.328972014-07-09
694U1V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction328972014-07-30
704V89|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.728532014-07-09
715IT8|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1228982016-07-27
724V6E|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.7128542014-07-09
734WF1|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0928972014-11-05
744U24|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.928972014-07-30
754U26|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.828972014-07-30
764U20|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.928972014-07-30
774V6C|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1928412014-07-09
785J91|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9628982016-07-06
794WWW|1|YALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.128412014-12-24
804V7T|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1928412014-07-09
814V6D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.8128412014-07-09
824V7V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2928412014-07-09
834V7S|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2528412014-07-09
844V7U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.128412014-07-09
854V6E|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.7128412014-07-09
864V5B|1|CBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.7428412014-07-09
874V5B|1|ABLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.7428412014-07-09
885J5B|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.828972016-07-27
894V4H|1|DBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4628412014-07-09
904V4H|1|BBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4628412014-07-09
915J5B|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.828982016-07-27
926HRM|1|1Small subunit ribosomal RNAstapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNAEscherichia coliBacteriaRF00177E. coli 70S d2d8 stapled ribosomeElectron microscopy2.9644502018-12-19
937K00|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.9827532020-09-23
946XZ7|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.128972020-07-22
956PJ6|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High resolution cryo-EM structure of E.coli 50SElectron microscopy2.228982020-01-22
967BL4|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleElectron microscopy2.428972021-05-12
976YS3|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideElectron microscopy2.5828882020-09-30
986YSS|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.629032020-08-19
996PCR|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40oElectron microscopy2.528972020-06-17
1006PC6|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 47Electron microscopy2.528972020-06-17
1016PC7|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 46Electron microscopy2.528972020-06-17
1026XZB|1|A2Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.5428972020-11-04
1036TBV|1|23S1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.728972020-01-01
1046TC3|1|23S1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.728972020-01-01
1056PCQ|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to VM2Electron microscopy2.628972020-06-17
1066XZA|1|A2Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.6628972020-11-04
1076QDW|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideElectron microscopy2.8328882020-01-15
1086PC5|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compounds 46 and VS1Electron microscopy2.728972020-06-17
1095AFI|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025412.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.929002015-03-11
1106WYV|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compounds 47 and VS1Electron microscopy2.7528972020-06-17
1116PCT|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 41qElectron microscopy2.828972020-06-17
1126U48|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S with phazolicin (PHZ) bound in exit tunnelElectron microscopy2.8728982019-09-18
1136Y69|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.8628872020-07-01
1146PCS|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40eElectron microscopy2.828972020-06-17
1156WNT|1|423s-5s joint ribosomal RNA23s-5s joint ribosomal RNAEscherichia coliBacteriaRF0000150S ribosomal subunit without free 5S rRNA and perturbed PTCElectron microscopy3.130252020-06-24
1165NWY|1|NLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF025412.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.928972017-07-19
1176WD0|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy329032020-07-01
1186WDE|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy329032020-07-01
1195H5U|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.0128972017-01-25
1206ORE|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Release complex 70SElectron microscopy2.929032019-06-19
1216PC8|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40qElectron microscopy2.928972020-06-17
1225MDV|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.9729032016-12-14
1236H4N|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy329002018-09-05
1246WNW|1|423s-5s joint ribosomal RNA23s-5s joint ribosomal RNAEscherichia coliBacteriaRF00001Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.230312020-06-24
1256ZU1|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy329002020-09-16
1266ZTO|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy329002020-09-23
1276ZTP|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy329002020-09-16
1286PCH|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 21Electron microscopy2.928972020-06-17
1296OM6|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAElectron microscopy3.129032021-02-10
1306X7K|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.128802020-09-02
1316YSR|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the P+9 stalled ribosome complexElectron microscopy3.129032020-08-19
1325MDW|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.0629032016-12-14
1336SZS|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisElectron microscopy3.0629032019-12-04
1345MGP|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.129002016-12-14
1355MDZ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome (empty A site)Electron microscopy3.129032016-12-14
1366S0K|1|ALarge subunit ribosomal RNA23S ribosomal RNA, tRNA-CCAEscherichia coliBacteriaRF02541Ribosome nascent chain in complex with SecAElectron microscopy3.128832019-10-09
1375U9G|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025413.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.229032017-03-22
1385U9F|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025413.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.229032017-03-22
1396WDD|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.229032020-07-01
1405UYM|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.229032017-06-07
1416ENU|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.128712017-11-22
1426X6T|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.228802020-09-02
1436YST|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.229032020-08-19
1446QUL|1|ALarge subunit ribosomal RNA23S rRNA, P-site fMet-tRNA(fMet)Escherichia coliBacteriaRF02541Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidElectron microscopy327952019-04-10
1456VWL|1|2Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.128332020-06-03
1465WFS|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy329002018-05-02
1477BL5|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli str. K-12 substr. MG1655BacteriaRF02541pre-50S-ObgE particleElectron microscopy3.329132021-05-12
1487JT1|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF0254170S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.329032020-11-11
1496WDG|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.329032020-07-01
1506WDF|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.329032020-07-01
1516WD1|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.329032020-07-01
1526OG7|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.329032019-09-25
1535WE4|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.129002018-04-25
1546OFX|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Non-rotated ribosome (Structure I)Electron microscopy3.329032019-09-25
1553JBV|1|bLarge subunit ribosomal RNARNA (2903-MER)Escherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.3229032016-01-27
1566C4I|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.2429042018-02-21
1575WDT|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy329002018-04-25
1587BV8|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mature 50S ribosomal subunit from RrmJ knock out E.coli strainElectron microscopy3.1428972020-07-01
1596ENF|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.228072017-11-22
1606WNV|1|423s-5s joint ribosomal RNA23s-5s joint ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome without free 5S rRNA and with a perturbed PTCElectron microscopy3.530252020-06-24
1616OGI|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.429032019-09-25
1625GAE|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3')Escherichia coliBacteriaRF02541RNC in complex with a translocating SecYEGElectron microscopy3.3328842016-01-27
1633JCE|1|ALarge subunit ribosomal RNA23 ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.229032016-01-13
1645MDY|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.3529032016-12-21
1655LZD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.429032016-11-23
1667D6Z|1|ALarge subunit ribosomal RNA23S ribosomal rRNAEscherichia coliBacteriaRF02541Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorElectron microscopy3.429032021-04-07
1676ZTM|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.329012020-09-16
1685WE6|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.429002018-04-25
1696I0Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelElectron microscopy3.228542018-12-05
1707JT2|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF0254170S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.529032020-11-11
1716X7F|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.528802020-09-02
1726BU8|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.529032018-01-31
1735WFK|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.429002018-05-02
1745O2R|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.429002017-07-26
1755LZE|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.529002016-11-23
1766ZTJ|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.429002020-09-16
1775U4I|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.529042017-01-11
1786VWN|1|2Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.428332020-06-03
1796VWM|1|2Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.428332020-06-03
1805UYL|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.629032017-06-14
1816WD2|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)Electron microscopy3.629032020-07-08
1826WDK|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)Electron microscopy3.629032020-07-08
1836WD5|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)Electron microscopy3.629032020-07-08
1846WDM|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)Electron microscopy3.629032020-07-01
1856WD3|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)Electron microscopy3.629032020-07-08
1865IQR|1|1Large subunit ribosomal RNALSU rRNAEscherichia coliBacteriaRF02541Structure of RelA bound to the 70S ribosomeElectron microscopy329042016-05-04
1876OSQ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.529032019-06-26
1883JBU|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.6429032016-01-27
1895LZA|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.629002016-11-23
1905KCR|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionElectron microscopy3.628972016-08-17
1915JU8|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.628972016-07-20
1925JTE|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.628972016-07-20
1937JT3|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)Electron microscopy3.729032020-11-11
1947JSZ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)Electron microscopy3.729032020-11-11
1957JSS|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)Electron microscopy3.729032020-11-11
1966WDJ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)Electron microscopy3.729032020-07-01
1976WD4|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)Electron microscopy3.729032020-07-08
1986WD8|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)Electron microscopy3.729032020-07-08
1996WD6|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)Electron microscopy3.729032020-07-08
2007BL3|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541pre-50S-ObgE particle state 2Electron microscopy3.529022021-05-12
2016WD9|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)Electron microscopy3.729032020-07-08
2026WDL|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)Electron microscopy3.729032020-07-01
2036XDQ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.728802020-09-02
2046VYS|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Escherichia coli transcription-translation complex A1 (TTC-A1) containing a 21 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteElectron microscopy3.728802020-09-02
2056VYQ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteElectron microscopy3.728802020-09-02
2066VU3|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacerElectron microscopy3.728802020-09-02
2076YSU|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy3.729032020-08-19
2086ORL|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.529032019-06-19
2096OSK|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541RF1 accommodated 70S complex at 60 msElectron microscopy3.629032019-06-26
2103J9Z|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.629042015-07-01
2116DNC|1|BLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.729032018-07-04
2123JCJ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.728542016-03-09
2135WF0|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.629002018-05-02
2147JSW|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)Electron microscopy3.829032020-11-11
2155UYQ|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.829032017-06-07
2166WDA|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)Electron microscopy3.829032020-07-08
2176VYR|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteElectron microscopy3.828802020-09-02
2186ENJ|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)Electron microscopy3.728712017-11-22
2196Q9A|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeElectron microscopy3.729032019-04-17
2205L3P|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.728902016-07-20
2215GAD|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC-SRP-SR complex early stateElectron microscopy3.728832016-01-27
2226GC8|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate - 50S rec*Electron microscopy3.828972018-06-20
2235UYP|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.929032017-06-07
2245UYK|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.929032017-06-07
2256OGF|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).Electron microscopy3.929032019-09-25
2266WD7|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)Electron microscopy3.929032020-07-08
2276ZTL|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.528992020-09-16
2287BL2|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541pre-50S-ObgE particle state 1Electron microscopy3.729022021-05-12
2296GWT|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)Electron microscopy3.828962018-08-15
2306OUO|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541RF2 accommodated state bound 70S complex at long incubation timeElectron microscopy3.729032019-06-19
2315KPW|1|27Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.929032016-09-28
2326GXM|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)Electron microscopy3.828962018-08-22
2335GAG|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP-SR in the closed stateElectron microscopy3.828832016-01-27
2345GAH|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP with detached NG domainElectron microscopy3.828832016-01-27
2356GBZ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate state 5Electron microscopy3.827892018-06-20
2365KPS|1|28Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.929032016-09-28
2375UYN|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy429032017-06-07
2386WDI|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)Electron microscopy429032020-07-01
2396WDB|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)Electron microscopy429032020-07-01
2406GC0|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate state 4Electron microscopy3.827292018-06-20
2413J9Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.929002015-04-15
2426GXO|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)Electron microscopy3.929002018-08-15
2436GXN|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)Electron microscopy3.928952018-08-15
2446O9K|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S initiation complexElectron microscopy428542019-05-29
2456O9J|1|BLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S Elongation Competent RibosomeElectron microscopy3.928412019-05-29
2465KPX|1|27Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.929032016-09-28
2473JCD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.729032016-01-13
2484UY8|1|ALarge subunit ribosomal RNARRNA-23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeElectron microscopy3.828542014-10-29
2495KCS|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionElectron microscopy3.929002016-08-17
2506OT3|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541RF2 accommodated state bound Release complex 70S at 24 msElectron microscopy3.929032019-06-19
2516Q97|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeElectron microscopy3.929032019-03-13
2526ZTN|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)Electron microscopy3.928992020-09-16
2537BL6|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF0254150S-ObgE-GMPPNP particleElectron microscopy428972021-05-12
2543J7Z|1|ALarge subunit ribosomal RNA23S rRNA, P-tRNA CCA-endEscherichia coliBacteriaRF02541Structure of the E. coli 50S subunit with ErmCL nascent chainElectron microscopy3.928542014-10-22
2555NP6|1|YLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S structure prior to bypassingElectron microscopy3.629032017-06-14
2563JA1|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.629042015-07-01
2576C4H|1|ALarge subunit ribosomal RNA23S rRNA, P-site tRNA fMetEscherichia coliBacteriaRF02541Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)Electron microscopy3.16362018-02-21
2585U4J|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.7112017-01-11

Release history

Release3.1783.179
Date2021-05-122021-05-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_83717.74NR_4.0_83717.733.178(253) 3J7Z|1|A, 3J9Y|1|A, 3J9Z|1|LA, 3JA1|1|LA, 3JBU|1|b, 3JBV|1|b, 3JCD|1|A, 3JCE|1|A, 3JCJ|1|A, 4U1U|1|BA, 4U1U|1|DA, 4U1V|1|BA, 4U1V|1|DA, 4U20|1|BA, 4U20|1|DA, 4U24|1|BA, 4U24|1|DA, 4U25|1|BA, 4U25|1|DA, 4U26|1|BA, 4U26|1|DA, 4U27|1|BA, 4U27|1|DA, 4UY8|1|A, 4V4H|1|BB, 4V4H|1|DB, 4V4Q|1|BB, 4V4Q|1|DB, 4V50|1|BB, 4V50|1|DB, 4V52|1|BB, 4V52|1|DB, 4V53|1|BB, 4V53|1|DB, 4V54|1|BB, 4V54|1|DB, 4V55|1|BB, 4V55|1|DB, 4V56|1|BB, 4V56|1|DB, 4V57|1|BB, 4V57|1|DB, 4V5B|1|AB, 4V5B|1|CB, 4V64|1|BB, 4V64|1|DB, 4V6C|1|BA, 4V6C|1|DA, 4V6D|1|BA, 4V6D|1|DA, 4V6E|1|BA, 4V6E|1|DA, 4V7S|1|BA, 4V7S|1|DA, 4V7T|1|BA, 4V7T|1|DA, 4V7U|1|BA, 4V7U|1|DA, 4V7V|1|BA, 4V7V|1|DA, 4V85|1|BA, 4V89|1|BA, 4V9C|1|BA, 4V9C|1|DA, 4V9D|1|CA, 4V9D|1|DA, 4V9O|1|AA, 4V9O|1|CA, 4V9O|1|EA, 4V9O|1|GA, 4V9P|1|AA, 4V9P|1|CA, 4V9P|1|EA, 4V9P|1|GA, 4WF1|1|BA, 4WF1|1|DA, 4WOI|1|BA, 4WOI|1|CA, 4WWW|1|RA, 4WWW|1|YA, 4YBB|1|CA, 4YBB|1|DA, 5AFI|1|A, 5GAD|1|A, 5GAE|1|A, 5GAG|1|A, 5GAH|1|A, 5H5U|1|A, 5IQR|1|1, 5IT8|1|CA, 5IT8|1|DA, 5J5B|1|CA, 5J5B|1|DA, 5J7L|1|CA, 5J7L|1|DA, 5J88|1|CA, 5J88|1|DA, 5J8A|1|CA, 5J8A|1|DA, 5J91|1|CA, 5J91|1|DA, 5JC9|1|CA, 5JC9|1|DA, 5JTE|1|BA, 5JU8|1|BA, 5KCR|1|1A, 5KCS|1|1A, 5KPS|1|28, 5KPW|1|27, 5KPX|1|27, 5L3P|1|A, 5LZA|1|A, 5LZD|1|A, 5LZE|1|A, 5MDV|1|1, 5MDW|1|1, 5MDY|1|1, 5MDZ|1|1, 5MGP|1|A, 5NP6|1|Y, 5NWY|1|N, 5O2R|1|A, 5U4I|1|A, 5U4J|1|A, 5U9F|1|01, 5U9G|1|01, 5UYK|1|01, 5UYL|1|01, 5UYM|1|01, 5UYN|1|01, 5UYP|1|01, 5UYQ|1|01, 5WDT|1|A, 5WE4|1|A, 5WE6|1|A, 5WF0|1|A, 5WFK|1|A, 5WFS|1|A, 6BU8|1|01, 6BY1|1|CA, 6BY1|1|DA, 6C4H|1|A, 6C4I|1|A, 6DNC|1|B, 6ENF|1|A, 6ENJ|1|A, 6ENU|1|A, 6GBZ|1|A, 6GC0|1|A, 6GC8|1|A, 6GWT|1|A, 6GXM|1|A, 6GXN|1|A, 6GXO|1|A, 6H4N|1|A, 6HRM|1|1, 6I0Y|1|A, 6I7V|1|CA, 6I7V|1|DA, 6LKQ|1|t, 6O9J|1|B, 6O9K|1|A, 6OFX|1|1, 6OG7|1|1, 6OGF|1|1, 6OGI|1|1, 6OM6|1|1, 6ORE|1|1, 6ORL|1|1, 6OSK|1|1, 6OSQ|1|1, 6OT3|1|1, 6OUO|1|1, 6PC5|1|I, 6PC6|1|I, 6PC7|1|I, 6PC8|1|I, 6PCH|1|I, 6PCQ|1|I, 6PCR|1|I, 6PCS|1|I, 6PCT|1|I, 6PJ6|1|I, 6Q97|1|1, 6Q9A|1|1, 6QDW|1|b, 6QUL|1|A, 6S0K|1|A, 6SZS|1|A, 6TBV|1|23S1, 6TC3|1|23S1, 6U48|1|CA, 6VU3|1|a, 6VWL|1|2, 6VWM|1|2, 6VWN|1|2, 6VYQ|1|a, 6VYR|1|a, 6VYS|1|a, 6WD0|1|1, 6WD1|1|1, 6WD2|1|1, 6WD3|1|1, 6WD4|1|1, 6WD5|1|1, 6WD6|1|1, 6WD7|1|1, 6WD8|1|1, 6WD9|1|1, 6WDA|1|1, 6WDB|1|1, 6WDD|1|1, 6WDE|1|1, 6WDF|1|1, 6WDG|1|1, 6WDI|1|1, 6WDJ|1|1, 6WDK|1|1, 6WDL|1|1, 6WDM|1|1, 6WNT|1|4, 6WNV|1|4, 6WNW|1|4, 6WYV|1|I, 6X6T|1|a, 6X7F|1|a, 6X7K|1|a, 6XDQ|1|a, 6XZ7|1|A, 6XZA|1|A2, 6XZB|1|A2, 6Y69|1|A, 6YS3|1|b, 6YSR|1|A, 6YSS|1|A, 6YST|1|A, 6YSU|1|A, 6ZTJ|1|BA, 6ZTL|1|BA, 6ZTM|1|BA, 6ZTN|1|BA, 6ZTO|1|BA, 6ZTP|1|BA, 6ZU1|1|BA, 7BV8|1|A, 7D6Z|1|A, 7JSS|1|1, 7JSW|1|1, 7JSZ|1|1, 7JT1|1|1, 7JT2|1|1, 7JT3|1|1, 7K00|1|a(5) 7BL2|1|A, 7BL3|1|A, 7BL4|1|A, 7BL5|1|A, 7BL6|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_83717.74NR_4.0_83717.753.180(258) 3J7Z|1|A, 3J9Y|1|A, 3J9Z|1|LA, 3JA1|1|LA, 3JBU|1|b, 3JBV|1|b, 3JCD|1|A, 3JCE|1|A, 3JCJ|1|A, 4U1U|1|BA, 4U1U|1|DA, 4U1V|1|BA, 4U1V|1|DA, 4U20|1|BA, 4U20|1|DA, 4U24|1|BA, 4U24|1|DA, 4U25|1|BA, 4U25|1|DA, 4U26|1|BA, 4U26|1|DA, 4U27|1|BA, 4U27|1|DA, 4UY8|1|A, 4V4H|1|BB, 4V4H|1|DB, 4V4Q|1|BB, 4V4Q|1|DB, 4V50|1|BB, 4V50|1|DB, 4V52|1|BB, 4V52|1|DB, 4V53|1|BB, 4V53|1|DB, 4V54|1|BB, 4V54|1|DB, 4V55|1|BB, 4V55|1|DB, 4V56|1|BB, 4V56|1|DB, 4V57|1|BB, 4V57|1|DB, 4V5B|1|AB, 4V5B|1|CB, 4V64|1|BB, 4V64|1|DB, 4V6C|1|BA, 4V6C|1|DA, 4V6D|1|BA, 4V6D|1|DA, 4V6E|1|BA, 4V6E|1|DA, 4V7S|1|BA, 4V7S|1|DA, 4V7T|1|BA, 4V7T|1|DA, 4V7U|1|BA, 4V7U|1|DA, 4V7V|1|BA, 4V7V|1|DA, 4V85|1|BA, 4V89|1|BA, 4V9C|1|BA, 4V9C|1|DA, 4V9D|1|CA, 4V9D|1|DA, 4V9O|1|AA, 4V9O|1|CA, 4V9O|1|EA, 4V9O|1|GA, 4V9P|1|AA, 4V9P|1|CA, 4V9P|1|EA, 4V9P|1|GA, 4WF1|1|BA, 4WF1|1|DA, 4WOI|1|BA, 4WOI|1|CA, 4WWW|1|RA, 4WWW|1|YA, 4YBB|1|CA, 4YBB|1|DA, 5AFI|1|A, 5GAD|1|A, 5GAE|1|A, 5GAG|1|A, 5GAH|1|A, 5H5U|1|A, 5IQR|1|1, 5IT8|1|CA, 5IT8|1|DA, 5J5B|1|CA, 5J5B|1|DA, 5J7L|1|CA, 5J7L|1|DA, 5J88|1|CA, 5J88|1|DA, 5J8A|1|CA, 5J8A|1|DA, 5J91|1|CA, 5J91|1|DA, 5JC9|1|CA, 5JC9|1|DA, 5JTE|1|BA, 5JU8|1|BA, 5KCR|1|1A, 5KCS|1|1A, 5KPS|1|28, 5KPW|1|27, 5KPX|1|27, 5L3P|1|A, 5LZA|1|A, 5LZD|1|A, 5LZE|1|A, 5MDV|1|1, 5MDW|1|1, 5MDY|1|1, 5MDZ|1|1, 5MGP|1|A, 5NP6|1|Y, 5NWY|1|N, 5O2R|1|A, 5U4I|1|A, 5U4J|1|A, 5U9F|1|01, 5U9G|1|01, 5UYK|1|01, 5UYL|1|01, 5UYM|1|01, 5UYN|1|01, 5UYP|1|01, 5UYQ|1|01, 5WDT|1|A, 5WE4|1|A, 5WE6|1|A, 5WF0|1|A, 5WFK|1|A, 5WFS|1|A, 6BU8|1|01, 6BY1|1|CA, 6BY1|1|DA, 6C4H|1|A, 6C4I|1|A, 6DNC|1|B, 6ENF|1|A, 6ENJ|1|A, 6ENU|1|A, 6GBZ|1|A, 6GC0|1|A, 6GC8|1|A, 6GWT|1|A, 6GXM|1|A, 6GXN|1|A, 6GXO|1|A, 6H4N|1|A, 6HRM|1|1, 6I0Y|1|A, 6I7V|1|CA, 6I7V|1|DA, 6LKQ|1|t, 6O9J|1|B, 6O9K|1|A, 6OFX|1|1, 6OG7|1|1, 6OGF|1|1, 6OGI|1|1, 6OM6|1|1, 6ORE|1|1, 6ORL|1|1, 6OSK|1|1, 6OSQ|1|1, 6OT3|1|1, 6OUO|1|1, 6PC5|1|I, 6PC6|1|I, 6PC7|1|I, 6PC8|1|I, 6PCH|1|I, 6PCQ|1|I, 6PCR|1|I, 6PCS|1|I, 6PCT|1|I, 6PJ6|1|I, 6Q97|1|1, 6Q9A|1|1, 6QDW|1|b, 6QUL|1|A, 6S0K|1|A, 6SZS|1|A, 6TBV|1|23S1, 6TC3|1|23S1, 6U48|1|CA, 6VU3|1|a, 6VWL|1|2, 6VWM|1|2, 6VWN|1|2, 6VYQ|1|a, 6VYR|1|a, 6VYS|1|a, 6WD0|1|1, 6WD1|1|1, 6WD2|1|1, 6WD3|1|1, 6WD4|1|1, 6WD5|1|1, 6WD6|1|1, 6WD7|1|1, 6WD8|1|1, 6WD9|1|1, 6WDA|1|1, 6WDB|1|1, 6WDD|1|1, 6WDE|1|1, 6WDF|1|1, 6WDG|1|1, 6WDI|1|1, 6WDJ|1|1, 6WDK|1|1, 6WDL|1|1, 6WDM|1|1, 6WNT|1|4, 6WNV|1|4, 6WNW|1|4, 6WYV|1|I, 6X6T|1|a, 6X7F|1|a, 6X7K|1|a, 6XDQ|1|a, 6XZ7|1|A, 6XZA|1|A2, 6XZB|1|A2, 6Y69|1|A, 6YS3|1|b, 6YSR|1|A, 6YSS|1|A, 6YST|1|A, 6YSU|1|A, 6ZTJ|1|BA, 6ZTL|1|BA, 6ZTM|1|BA, 6ZTN|1|BA, 6ZTO|1|BA, 6ZTP|1|BA, 6ZU1|1|BA, 7BL2|1|A, 7BL3|1|A, 7BL4|1|A, 7BL5|1|A, 7BL6|1|A, 7BV8|1|A, 7D6Z|1|A, 7JSS|1|1, 7JSW|1|1, 7JSZ|1|1, 7JT1|1|1, 7JT2|1|1, 7JT3|1|1, 7K00|1|a(0) (1) 7B5K|1|A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
16HRM|1|1E. coli 70S d2d8 stapled ribosomeELECTRON MICROSCOPY2.964450
26C4H|1|AConformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)ELECTRON MICROSCOPY3.1636
36YST|1|AStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.22903
46OGI|1|170S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.42903
56VWL|1|270S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.12833
63JA1|1|LAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
73JBV|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322903
87BL5|1|Apre-50S-ObgE particleELECTRON MICROSCOPY3.32913
94V9D|1|CAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32897
104U1U|1|BACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
114U20|1|BACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
124U1V|1|BACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
134WF1|1|BACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
144U27|1|BACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
154U25|1|BACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
164U26|1|BACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
174U24|1|BACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
184V9C|1|DAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
194WOI|1|BA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
206WDF|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.32903
216WDG|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.32903
226WD1|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.32903
236GXO|1|ACryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)ELECTRON MICROSCOPY3.92900
247JT3|1|1Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)ELECTRON MICROSCOPY3.72903
256ENF|1|ACryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.22807
266ENU|1|APolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.12871
276ENJ|1|APolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.72871
284V54|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
294V56|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
304V64|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
314V57|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
324V52|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
334V55|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
344V53|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
354V4H|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
366O9J|1|B70S Elongation Competent RibosomeELECTRON MICROSCOPY3.92841
374V4Q|1|BBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
384V5B|1|ABStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
394V50|1|BBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
404V9P|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
414V9O|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
424V9O|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
434V9P|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
444V9P|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
454V9O|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
463JCJ|1|AStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.72854
474V9P|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
484V9O|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
494UY8|1|AMolecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.82854
506I0Y|1|ATnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelELECTRON MICROSCOPY3.22854
513J7Z|1|AStructure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.92854
524V89|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72853
534V85|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22853
546LKQ|1|tThe Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-RAY DIFFRACTION3.12850
555JTE|1|BACryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.62897
565JU8|1|BACryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.62897
575NWY|1|N2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.92897
586BY1|1|CAE. coli pH03H9 complexX-RAY DIFFRACTION3.942867
596WDB|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)ELECTRON MICROSCOPY42903
605LZE|1|AStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.52900
615LZA|1|AStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.62900
625LZD|1|AStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.42903
636WNW|1|4Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.23031
645U9G|1|013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.22903
655U9F|1|013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.22903
666DNC|1|BE.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.72903
676BU8|1|0170S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.52903
686WDI|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)ELECTRON MICROSCOPY42903
696WDK|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)ELECTRON MICROSCOPY3.62903
706WDM|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)ELECTRON MICROSCOPY3.62903
716WDL|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)ELECTRON MICROSCOPY3.72903
726WDJ|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)ELECTRON MICROSCOPY3.72903
736WDD|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.22903
746WD0|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY32903
756WDE|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY32903
765UYM|1|0170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.22903
776WD9|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)ELECTRON MICROSCOPY3.72903
786WDA|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)ELECTRON MICROSCOPY3.82903
796WD8|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)ELECTRON MICROSCOPY3.72903
806WD3|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)ELECTRON MICROSCOPY3.62903
816WD2|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)ELECTRON MICROSCOPY3.62903
826WD4|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)ELECTRON MICROSCOPY3.72903
836WD6|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)ELECTRON MICROSCOPY3.72903
846WD5|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)ELECTRON MICROSCOPY3.62903
856WD7|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)ELECTRON MICROSCOPY3.92903
865UYK|1|0170S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.92903
875UYL|1|0170S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.62903
885UYN|1|0170S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY42903
895UYP|1|0170S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.92903
905UYQ|1|0170S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.82903
915O2R|1|ACryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.42900
925KCS|1|1ACryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.92900
933J9Y|1|ACryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92900
945AFI|1|A2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92900
955MGP|1|AStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.12900
966H4N|1|AStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY32900
976Y69|1|ACryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.862887
985WE6|1|A70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.42900
995WFK|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.42900
1005WF0|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.62900
1015WDT|1|A70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY32900
1025WE4|1|A70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.12900
1035WFS|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY32900
1045KPX|1|27Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.92903
1055KPS|1|28Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.92903
1065KPW|1|27Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.92903
1076SZS|1|ARelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.062903
1086OM6|1|1Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAELECTRON MICROSCOPY3.12903
1096Q9A|1|1Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeELECTRON MICROSCOPY3.72903
1106X7K|1|aCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.12880
1116X7F|1|aCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.52880
1126X6T|1|aCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.22880
1136XDQ|1|aCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.72880
1146VU3|1|aCryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacerELECTRON MICROSCOPY3.72880
1156VYQ|1|aEscherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteELECTRON MICROSCOPY3.72880
1166VYS|1|aEscherichia coli transcription-translation complex A1 (TTC-A1) containing a 21 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteELECTRON MICROSCOPY3.72880
1176VYR|1|aEscherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteELECTRON MICROSCOPY3.82880
1185MDZ|1|1Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.12903
1195MDW|1|1Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.062903
1205MDV|1|1Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.972903
1216C4I|1|AConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.242904
1226OSK|1|1RF1 accommodated 70S complex at 60 msELECTRON MICROSCOPY3.62903
1236OSQ|1|1RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.52903
1246ORE|1|1Release complex 70SELECTRON MICROSCOPY2.92903
1256OUO|1|1RF2 accommodated state bound 70S complex at long incubation timeELECTRON MICROSCOPY3.72903
1266OT3|1|1RF2 accommodated state bound Release complex 70S at 24 msELECTRON MICROSCOPY3.92903
1276Q97|1|1Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.92903
1283J9Z|1|LAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
1293JCE|1|AStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22903
1303JCD|1|AStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.72903
1315H5U|1|AMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.012897
1327D6Z|1|AMolecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorELECTRON MICROSCOPY3.42903
1336TBV|1|23S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.72897
1346TC3|1|23S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.72897
1356ZTN|1|BAE. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)ELECTRON MICROSCOPY3.92899
1366ZTM|1|BAE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.32901
1376ZTJ|1|BAE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.42900
1386ZTL|1|BAE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.52899
1396ZTP|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY32900
1406ZTO|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY32900
1416ZU1|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY32900
1427K00|1|aStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982753
1436YSS|1|AStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.62903
1446YSR|1|AStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.12903
1456YSU|1|AStructure of the P+0 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY3.72903
1466GWT|1|ACryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)ELECTRON MICROSCOPY3.82896
1476GXN|1|ACryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)ELECTRON MICROSCOPY3.92895
1486GXM|1|ACryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)ELECTRON MICROSCOPY3.82896
1495L3P|1|ACryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.72890
1505NP6|1|Y70S structure prior to bypassingELECTRON MICROSCOPY3.62903
1516WNV|1|470S ribosome without free 5S rRNA and with a perturbed PTCELECTRON MICROSCOPY3.53025
1526WNT|1|450S ribosomal subunit without free 5S rRNA and perturbed PTCELECTRON MICROSCOPY3.13025
1537BL3|1|Apre-50S-ObgE particle state 2ELECTRON MICROSCOPY3.52902
1547BL2|1|Apre-50S-ObgE particle state 1ELECTRON MICROSCOPY3.72902
1556GC0|1|A50S ribosomal subunit assembly intermediate state 4ELECTRON MICROSCOPY3.82729
1566GBZ|1|A50S ribosomal subunit assembly intermediate state 5ELECTRON MICROSCOPY3.82789
1576GC8|1|A50S ribosomal subunit assembly intermediate - 50S rec*ELECTRON MICROSCOPY3.82897
1587BL6|1|A50S-ObgE-GMPPNP particleELECTRON MICROSCOPY42897
1597BL4|1|Ain vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42897
1607BV8|1|AMature 50S ribosomal subunit from RrmJ knock out E.coli strainELECTRON MICROSCOPY3.142897
1616PCT|1|IE. coli 50S ribosome bound to compound 41qELECTRON MICROSCOPY2.82897
1626PCQ|1|IE. coli 50S ribosome bound to VM2ELECTRON MICROSCOPY2.62897
1636PCR|1|IE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52897
1646PC6|1|IE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52897
1656PC5|1|IE. coli 50S ribosome bound to compounds 46 and VS1ELECTRON MICROSCOPY2.72897
1666PCS|1|IE. coli 50S ribosome bound to compound 40eELECTRON MICROSCOPY2.82897
1676PC7|1|IE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52897
1686PC8|1|IE. coli 50S ribosome bound to compound 40qELECTRON MICROSCOPY2.92897
1696PCH|1|IE. coli 50S ribosome bound to compound 21ELECTRON MICROSCOPY2.92897
1706WYV|1|IE. coli 50S ribosome bound to compounds 47 and VS1ELECTRON MICROSCOPY2.752897
1716PJ6|1|IHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22898
1726U48|1|CAE. coli 50S with phazolicin (PHZ) bound in exit tunnelELECTRON MICROSCOPY2.872898
1735JC9|1|CAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032898
1745J5B|1|CAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82898
1755J91|1|CAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962898
1765J7L|1|CAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32898
1775J8A|1|CAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12898
1785IT8|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122898
1795J88|1|CAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322898
1804YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12898
1816I7V|1|CARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92898
1824U24|1|DACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
1834U26|1|DACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
1844WF1|1|DACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
1854U25|1|DACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
1864U27|1|DACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
1874U1U|1|DACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
1884U20|1|DACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
1894U1V|1|DACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
1904V9D|1|DAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32896
1914V9C|1|BAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
1924WOI|1|CA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
1934V7U|1|DACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12841
1944V7V|1|DACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292841
1954V7S|1|DACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252841
1964WWW|1|YACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12841
1974V7T|1|DACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192841
1984V6C|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192841
1994V6E|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712841
2004V6D|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812841
2014V5B|1|CBStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
2024V4H|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
2034V4Q|1|DBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
2044V54|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
2054V55|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
2064V53|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
2074V52|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
2084V64|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
2094V57|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
2104V56|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
2114V50|1|DBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
2124V7V|1|BACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292854
2134V7U|1|BACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12854
2144V7T|1|BACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192854
2154V6C|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192854
2164WWW|1|RACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12854
2174V7S|1|BACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252854
2184V6D|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812854
2194V6E|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712854
2206I7V|1|DARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92897
2215KCR|1|1ACryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.62897
2224YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12897
2235J5B|1|DAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82897
2245J91|1|DAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962897
2255J8A|1|DAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12897
2265J7L|1|DAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32897
2275JC9|1|DAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032897
2285IT8|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122897
2295J88|1|DAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322897
2306XZA|1|A2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.662897
2316XZB|1|A2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.542897
2326XZ7|1|AE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12897
2336BY1|1|DAE. coli pH03H9 complexX-RAY DIFFRACTION3.942869
2346QDW|1|bCryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.832888
2356YS3|1|bCryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.582888
2363JBU|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.642903
2376O9K|1|A70S initiation complexELECTRON MICROSCOPY42854
2386VWN|1|270S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.42833
2396VWM|1|270S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.42833
2406OFX|1|1Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.32903
2416OG7|1|170S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.32903
2426OGF|1|170S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).ELECTRON MICROSCOPY3.92903
2437JSW|1|1ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)ELECTRON MICROSCOPY3.82903
2447JSZ|1|1ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)ELECTRON MICROSCOPY3.72903
2457JSS|1|1ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)ELECTRON MICROSCOPY3.72903
2467JT1|1|170S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.32903
2477JT2|1|170S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.52903
2486QUL|1|AStructure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidELECTRON MICROSCOPY32795
2495GAE|1|ARNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.332884
2506S0K|1|ARibosome nascent chain in complex with SecAELECTRON MICROSCOPY3.12883
2515GAG|1|ARNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.82883
2525GAD|1|ARNC-SRP-SR complex early stateELECTRON MICROSCOPY3.72883
2535GAH|1|ARNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.82883
2545MDY|1|1Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.352903
2556ORL|1|1RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.52903
2565IQR|1|1Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32904
2575U4I|1|AStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.52904
2585U4J|1|AStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.711

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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