RNA 3D Hub //

Equivalence class NR_4.0_98017.1 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
19LEE|1|D (rep)Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
29LEE|1|HGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
39LEE|1|CGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
49LEE|1|EGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
59LEE|1|AGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
69LEE|1|BGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
79LEE|1|GGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
89LEE|1|JGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
99LEC|1|JGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Focused asymmetric unit of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
109LEE|1|IGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
119LEE|1|FGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21 Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21 Golld RNAElectron microscopy2.513362025-09-10
129LEM|1|JGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
139LEM|1|HGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
149LEM|1|CGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
159LEM|1|BGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
169LEM|1|AGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
179LEM|1|GGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
189LEM|1|IGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
199LEM|1|EGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
209LEM|1|DGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
219LEM|1|FGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Composite map of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
229LEL|1|JGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNASag-18RS21-tRNASer Golld RNAStreptococcus agalactiae 18RS21BacteriaRF02032Focused asymmetric unit of Sag-18RS21-tRNASer Golld RNAElectron microscopy2.984342025-09-10
239LMF|1|AGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
249LMF|1|FGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
259LMF|1|JGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
269LMF|1|BGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
279LMF|1|HGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
289LMF|1|GGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
299LMF|1|IGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
309LMF|1|EGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
319LMF|1|DGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
329LMF|1|CGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19

Release history

Release4.4
Date2025-09-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
19LEL|1|JFocused asymmetric unit of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
29LEM|1|HComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
39LEM|1|DComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
49LEM|1|IComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
59LEM|1|GComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
69LEM|1|EComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
79LEM|1|AComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
89LEM|1|BComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
99LEM|1|JComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
109LEM|1|FComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
119LEM|1|CComposite map of Sag-18RS21-tRNASer Golld RNAELECTRON MICROSCOPY2.98434
129LEE|1|JComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
139LEE|1|BComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
149LEE|1|EComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
159LEE|1|IComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
169LEE|1|CComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
179LEE|1|HComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
189LEE|1|FComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
199LEE|1|GComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
209LEE|1|DComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
219LEE|1|AComposite map of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
229LEC|1|JFocused asymmetric unit of Sag-18RS21 Golld RNAELECTRON MICROSCOPY2.51336
239LMF|1|BStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
249LMF|1|GStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
259LMF|1|JStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
269LMF|1|CStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
279LMF|1|EStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
289LMF|1|DStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
299LMF|1|FStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
309LMF|1|IStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
319LMF|1|AStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
329LMF|1|HStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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