Equivalence class NR_all_00405.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1KD3|A (rep) | The Crystal Structure of r(GGUCACAGCCC)2, Thallium form | X-ray diffraction | 1.8 | 2003-03-04 | |||||
| 2 | 1KD4|A | The Crystal Structure of r(GGUCACAGCCC)2, Barium form | X-ray diffraction | 1.85 | 2003-03-04 | |||||
| 3 | 1KD5|A | The Crystal Structure of r(GGUCACAGCCC)2 metal free form | X-ray diffraction | 1.58 | 2003-03-04 | |||||
| 4 | 1XV0|A | Solution NMR structure of RNA internal loop with three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCGAAGCCG | Solution NMR | 2004-11-09 | ||||||
| 5 | 2DD1|A | Three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCAAAGCCG | Solution NMR | 2006-06-13 | ||||||
| 6 | 2DD2|A | An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: I. The major conformation with A6/A15/A16 stack | Solution NMR | 2006-06-13 | ||||||
| 7 | 2DD3|A | An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: II. The minor conformation with A6/A5/A16 stack | Solution NMR | 2006-06-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: