RNA 3D Hub //

Equivalence class NR_all_17906.1 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
12NZ4|1|Q+ 2NZ4|1|F (rep)GlmS ribozyme, substrate strand RNA 13-merStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.51542007-01-16
23G9C|1|Q+ 3G9C|1|FglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.91522009-11-03
33G9C|1|R+ 3G9C|1|GglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.91522009-11-03
42NZ4|1|R+ 2NZ4|1|GGlmS ribozyme, substrate strand RNA 13-merStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.51542007-01-16
53G9C|1|S+ 3G9C|1|HglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.91512009-11-03
62NZ4|1|P+ 2NZ4|1|EGlmS ribozyme, substrate strand RNA 13-merStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.51542007-01-16
73G96|1|R+ 3G96|1|GglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.011542009-11-03
82NZ4|1|S+ 2NZ4|1|HGlmS ribozyme, substrate strand RNA 13-merStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.51542007-01-16
93G8S|1|Q+ 3G8S|1|FGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.11542009-11-03
103G9C|1|P+ 3G9C|1|EglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.91512009-11-03
113G96|1|Q+ 3G96|1|FglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.011542009-11-03
123G8S|1|R+ 3G8S|1|GGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.11542009-11-03
133L3C|1|Q+ 3L3C|1|FGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.851542009-12-29
143L3C|1|R+ 3L3C|1|GGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.851542009-12-29
153G96|1|P+ 3G96|1|EglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.011542009-11-03
163G96|1|S+ 3G96|1|HglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.011542009-11-03
173L3C|1|P+ 3L3C|1|EGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.851542009-12-29
183L3C|1|S+ 3L3C|1|HGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.851542009-12-29
193G8S|1|S+ 3G8S|1|HGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.11542009-11-03
203G8S|1|P+ 3G8S|1|EGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.11542009-11-03
213G8T|1|R+ 3G8T|1|GglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction31542009-11-03
223G8T|1|Q+ 3G8T|1|FglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction31542009-11-03
233G8T|1|P+ 3G8T|1|EglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction31542009-11-03
243G8T|1|S+ 3G8T|1|HglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction31542009-11-03

Release history

Release3.3783.3793.3803.3813.3823.3833.3843.3853.3863.3873.3883.3893.3903.3913.3923.3933.394
Date2025-03-132025-03-192025-03-262025-04-022025-04-092025-04-162025-04-232025-04-302025-05-072025-05-142025-05-212025-05-282025-06-042025-06-112025-06-182025-06-252025-07-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
13G8T|1|P+ 3G8T|1|ECrystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3154
23G9C|1|S+ 3G9C|1|HCrystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9151
33G9C|1|P+ 3G9C|1|ECrystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9151
43L3C|1|R+ 3L3C|1|GCrystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85154
53G8S|1|Q+ 3G8S|1|FCrystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1154
63G9C|1|Q+ 3G9C|1|FCrystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9152
73G9C|1|R+ 3G9C|1|GCrystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9152
83L3C|1|Q+ 3L3C|1|FCrystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85154
92NZ4|1|Q+ 2NZ4|1|FStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5154
103G96|1|R+ 3G96|1|GCrystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01154
112NZ4|1|R+ 2NZ4|1|GStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5154
123G8S|1|R+ 3G8S|1|GCrystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1154
133G96|1|Q+ 3G96|1|FCrystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01154
142NZ4|1|S+ 2NZ4|1|HStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5154
153L3C|1|S+ 3L3C|1|HCrystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85154
163G96|1|S+ 3G96|1|HCrystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01154
173L3C|1|P+ 3L3C|1|ECrystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85154
182NZ4|1|P+ 2NZ4|1|EStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5154
193G96|1|P+ 3G96|1|ECrystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01154
203G8S|1|S+ 3G8S|1|HCrystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1154
213G8T|1|R+ 3G8T|1|GCrystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3154
223G8T|1|Q+ 3G8T|1|FCrystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3154
233G8T|1|S+ 3G8T|1|HCrystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3154
243G8S|1|P+ 3G8S|1|ECrystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1154

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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