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Equivalence class NR_all_30153.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
11I9V|1|A (rep)Transfer RNAPHENYLALANINE TRANSFER RNASaccharomyces cerevisiaeEukaryaRF00005CRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEXX-ray diffraction2.6762001-06-04
21EHZ|1|ATransfer RNATRANSFER RNA (PHE)Saccharomyces cerevisiaeEukaryaRF00005The crystal structure of yeast phenylalanine tRNA at 1.93 A resolutionX-ray diffraction1.93762000-10-02
34TRA|1|ATransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALSX-ray diffraction3761987-11-06
41TRA|1|ATransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005RESTRAINED REFINEMENT OF THE MONOCLINIC FORM OF YEAST PHENYLALANINE TRANSFER RNA. TEMPERATURE FACTORS AND DYNAMICS, COORDINATED WATERS, AND BASE-PAIR PROPELLER TWIST ANGLESX-ray diffraction3761986-07-14
56TNA|1|ATransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005CRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENTX-ray diffraction2.7761979-01-16
61FCW|1|ATransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005TRNA POSITIONS DURING THE ELONGATION CYCLEElectron microscopy17762000-08-11
71FCW|1|BTransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005TRNA POSITIONS DURING THE ELONGATION CYCLEElectron microscopy17762000-08-11
81FCW|1|CTransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005TRNA POSITIONS DURING THE ELONGATION CYCLEElectron microscopy17762000-08-11
91FCW|1|DTransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005TRNA POSITIONS DURING THE ELONGATION CYCLEElectron microscopy17762000-08-11
101FCW|1|ETransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005TRNA POSITIONS DURING THE ELONGATION CYCLEElectron microscopy17762000-08-11
111OB2|1|BTransfer RNATRANSFER-RNA, PHESaccharomyces cerevisiaeEukaryaRF00005E. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNAX-ray diffraction3.35762004-05-27
121TN1|1|ATransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005CRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE TRNAX-ray diffraction3761987-01-15
134TNA|1|ATransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005FURTHER REFINEMENT OF THE STRUCTURE OF YEAST T-RNA-PHEX-ray diffraction2.5761978-04-12
141TN2|1|ATransfer RNATRNAPHESaccharomyces cerevisiaeEukaryaRF00005CRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE T-RNAX-ray diffraction3761986-10-24
151LS2|1|BTransfer RNAPhenylalanine transfer RNASaccharomyces cerevisiaeEukaryaRF00005Fitting of EF-Tu and tRNA in the Low Resolution Cryo-EM Map of an EF-Tu Ternary Complex (GDP and Kirromycin) Bound to E. coli 70S RibosomeElectron microscopy16.8762002-06-26

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.86
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-29

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_30153.1NR_2.0_30153.22.87(1) 1EHZ|1|A(14) 1FCW|1|A, 1FCW|1|B, 1FCW|1|C, 1FCW|1|D, 1FCW|1|E, 1I9V|1|A, 1LS2|1|B, 1OB2|1|B, 1TN1|1|A, 1TN2|1|A, 1TRA|1|A, 4TNA|1|A, 4TRA|1|A, 6TNA|1|A(0)
NR_all_30153.1NR_2.5_30153.22.87(2) 1EHZ|1|A, 4TNA|1|A(13) 1FCW|1|A, 1FCW|1|B, 1FCW|1|C, 1FCW|1|D, 1FCW|1|E, 1I9V|1|A, 1LS2|1|B, 1OB2|1|B, 1TN1|1|A, 1TN2|1|A, 1TRA|1|A, 4TRA|1|A, 6TNA|1|A(1) 5AXM|1|P
NR_all_30153.1NR_20.0_30153.22.87(15) 1EHZ|1|A, 1FCW|1|A, 1FCW|1|B, 1FCW|1|C, 1FCW|1|D, 1FCW|1|E, 1I9V|1|A, 1LS2|1|B, 1OB2|1|B, 1TN1|1|A, 1TN2|1|A, 1TRA|1|A, 4TNA|1|A, 4TRA|1|A, 6TNA|1|A(0) (2) 5AXM|1|P, 5AXN|1|P
NR_all_30153.1NR_3.0_30153.22.87(8) 1EHZ|1|A, 1I9V|1|A, 1TN1|1|A, 1TN2|1|A, 1TRA|1|A, 4TNA|1|A, 4TRA|1|A, 6TNA|1|A(7) 1FCW|1|A, 1FCW|1|B, 1FCW|1|C, 1FCW|1|D, 1FCW|1|E, 1LS2|1|B, 1OB2|1|B(2) 5AXM|1|P, 5AXN|1|P
NR_all_30153.1NR_3.5_30153.22.87(9) 1EHZ|1|A, 1I9V|1|A, 1OB2|1|B, 1TN1|1|A, 1TN2|1|A, 1TRA|1|A, 4TNA|1|A, 4TRA|1|A, 6TNA|1|A(6) 1FCW|1|A, 1FCW|1|B, 1FCW|1|C, 1FCW|1|D, 1FCW|1|E, 1LS2|1|B(2) 5AXM|1|P, 5AXN|1|P
NR_all_30153.1NR_4.0_30153.22.87(9) 1EHZ|1|A, 1I9V|1|A, 1OB2|1|B, 1TN1|1|A, 1TN2|1|A, 1TRA|1|A, 4TNA|1|A, 4TRA|1|A, 6TNA|1|A(6) 1FCW|1|A, 1FCW|1|B, 1FCW|1|C, 1FCW|1|D, 1FCW|1|E, 1LS2|1|B(2) 5AXM|1|P, 5AXN|1|P
NR_all_30153.1NR_all_30153.22.87(15) 1EHZ|1|A, 1FCW|1|A, 1FCW|1|B, 1FCW|1|C, 1FCW|1|D, 1FCW|1|E, 1I9V|1|A, 1LS2|1|B, 1OB2|1|B, 1TN1|1|A, 1TN2|1|A, 1TRA|1|A, 4TNA|1|A, 4TRA|1|A, 6TNA|1|A(0) (2) 5AXM|1|P, 5AXN|1|P

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
11TN1|1|ACRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE TRNAX-RAY DIFFRACTION376
21TN2|1|ACRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE T-RNAX-RAY DIFFRACTION376
34TNA|1|AFURTHER REFINEMENT OF THE STRUCTURE OF YEAST T-RNA-PHEX-RAY DIFFRACTION2.576
41TRA|1|ARESTRAINED REFINEMENT OF THE MONOCLINIC FORM OF YEAST PHENYLALANINE TRANSFER RNA. TEMPERATURE FACTORS AND DYNAMICS, COORDINATED WATERS, AND BASE-PAIR PROPELLER TWIST ANGLESX-RAY DIFFRACTION376
51EHZ|1|AThe crystal structure of yeast phenylalanine tRNA at 1.93 A resolutionX-RAY DIFFRACTION1.9376
66TNA|1|ACRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENTX-RAY DIFFRACTION2.776
74TRA|1|ARESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALSX-RAY DIFFRACTION376
81FCW|1|ETRNA POSITIONS DURING THE ELONGATION CYCLEELECTRON MICROSCOPY1776
91FCW|1|CTRNA POSITIONS DURING THE ELONGATION CYCLEELECTRON MICROSCOPY1776
101FCW|1|ATRNA POSITIONS DURING THE ELONGATION CYCLEELECTRON MICROSCOPY1776
111FCW|1|BTRNA POSITIONS DURING THE ELONGATION CYCLEELECTRON MICROSCOPY1776
121FCW|1|DTRNA POSITIONS DURING THE ELONGATION CYCLEELECTRON MICROSCOPY1776
131I9V|1|ACRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEXX-RAY DIFFRACTION2.676
141OB2|1|BE. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNAX-RAY DIFFRACTION3.3576
151LS2|1|BFitting of EF-Tu and tRNA in the Low Resolution Cryo-EM Map of an EF-Tu Ternary Complex (GDP and Kirromycin) Bound to E. coli 70S RibosomeELECTRON MICROSCOPY16.876

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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