#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16ZMI|1|CC (rep)Transfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.62020-08-19
26ZM7|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.72020-07-29
36ZVH|1|xTransfer RNAE-site tRNAHomo sapiensEukaryaRF00005EDF1-ribosome complexElectron microscopy2.92020-08-19
46Z6N|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.92020-07-29
56ZME|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy32020-08-12
66Z6L|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy32020-07-29
77OLD|1|5Transfer RNApe/E tRNAChaetomium thermophilum var. thermophilum DSM 1495EukaryaRF00005Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST stateElectron microscopy32022-01-26
86ZMO|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexElectron microscopy3.12020-08-19

Release history

Release3.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.251
Date2022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_71217.2NR_all_71217.13.215(7) 6Z6L|1|CC, 6Z6N|1|CC, 6ZM7|1|CC, 6ZME|1|CC, 6ZMI|1|CC, 6ZMO|1|CC, 6ZVH|1|x(1) 7OLD|1|5(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_71217.2NR_all_71217.33.252(8) 6Z6L|1|CC, 6Z6N|1|CC, 6ZM7|1|CC, 6ZME|1|CC, 6ZMI|1|CC, 6ZMO|1|CC, 6ZVH|1|x, 7OLD|1|5(0) (1) 7QVP|1|CC

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16ZVH|1|xEDF1-ribosome complexELECTRON MICROSCOPY2.975
26ZMO|1|CCSARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.175
36ZMI|1|CCSARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.675
46ZM7|1|CCSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.775
56ZME|1|CCSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY375
66Z6L|1|CCCryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY375
76Z6N|1|CCCryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.975
87OLD|1|5Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST stateELECTRON MICROSCOPY375

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0456 s