Equivalence class NR_all_74981.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4RKV|1|A (rep) | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 0.88 | 6 | 2014-11-19 | |||
| 2 | 4RNE|1|A | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 1.01 | 6 | 2014-11-19 | |||
| 3 | 4RNE|1|F | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 1.01 | 6 | 2014-11-19 | |||
| 4 | 1J8G|1|A | 5'-R(*UP*GP*GP*GP*GP*U)-3' | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-ray diffraction | 0.61 | 6 | 2001-11-23 | ||||
| 5 | 1RAU|1|A | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | Solution NMR | 6 | 1994-01-31 | |||||
| 6 | 4XK0|1|A | RNA (5'-(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Crystal structure of a tetramolecular RNA G-quadruplex in potassium | X-ray diffraction | 1.08 | 6 | 2015-02-11 | |||
| 7 | 4RJ1|1|A | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 0.92 | 6 | 2014-11-12 | |||
| 8 | 4RKV|1|B | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 0.88 | 6 | 2014-11-19 | |||
| 9 | 1J8G|1|B | 5'-R(*UP*GP*GP*GP*GP*U)-3' | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-ray diffraction | 0.61 | 6 | 2001-11-23 | ||||
| 10 | 1RAU|1|B | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | Solution NMR | 6 | 1994-01-31 | |||||
| 11 | 4RJ1|1|B | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 0.92 | 6 | 2014-11-12 | |||
| 12 | 4RNE|1|B | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 1.01 | 6 | 2014-11-19 | |||
| 13 | 1J8G|1|C | 5'-R(*UP*GP*GP*GP*GP*U)-3' | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-ray diffraction | 0.61 | 6 | 2001-11-23 | ||||
| 14 | 1RAU|1|C | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | Solution NMR | 6 | 1994-01-31 | |||||
| 15 | 4XK0|1|C | RNA (5'-(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Crystal structure of a tetramolecular RNA G-quadruplex in potassium | X-ray diffraction | 1.08 | 6 | 2015-02-11 | |||
| 16 | 4RNE|1|C | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 1.01 | 6 | 2014-11-19 | |||
| 17 | 1J8G|1|D | 5'-R(*UP*GP*GP*GP*GP*U)-3' | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-ray diffraction | 0.61 | 6 | 2001-11-23 | ||||
| 18 | 1RAU|1|D | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | Solution NMR | 6 | 1994-01-31 | |||||
| 19 | 4RNE|1|D | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 1.01 | 6 | 2014-11-19 | |||
| 20 | 4RNE|1|E | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 1.01 | 6 | 2014-11-19 | |||
| 21 | 4RNE|1|G | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 1.01 | 6 | 2014-11-19 | |||
| 22 | 4RNE|1|H | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 1.01 | 6 | 2014-11-19 |
Release history
| Release | 2.46 | 2.47 | 2.48 | 2.49 | 2.50 | 2.51 | 2.52 | 2.53 | 2.54 | 2.55 | 2.56 | 2.57 | 2.58 | 2.59 | 2.60 | 2.61 | 2.62 | 2.63 | 2.64 | 2.65 | 2.66 | 2.67 | 2.68 | 2.69 | 2.70 | 2.71 | 2.72 | 2.73 | 2.74 | 2.75 | 2.76 | 2.77 | 2.78 | 2.79 | 2.80 | 2.81 | 2.82 | 2.83 | 2.84 | 2.85 | 2.86 | 2.87 | 2.88 | 2.89 | 2.90 | 2.91 | 2.92 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2015-10-23 | 2015-10-30 | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 | 2015-12-04 | 2015-12-11 | 2015-12-18 | 2015-12-25 | 2016-01-01 | 2016-01-08 | 2016-01-15 | 2016-01-22 | 2016-01-29 | 2016-02-05 | 2016-02-12 | 2016-02-19 | 2016-02-26 | 2016-03-04 | 2016-03-11 | 2016-03-18 | 2016-03-25 | 2016-04-01 | 2016-04-08 | 2016-04-15 | 2016-04-22 | 2016-04-29 | 2016-05-06 | 2016-05-13 | 2016-05-20 | 2016-05-27 | 2016-06-03 | 2016-06-10 | 2016-06-17 | 2016-06-24 | 2016-07-01 | 2016-07-08 | 2016-07-15 | 2016-07-22 | 2016-07-29 | 2016-08-05 | 2016-08-12 | 2016-08-19 | 2016-08-26 | 2016-09-02 | 2016-09-09 |
Parents
Children
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 4XK0|1|A | Crystal structure of a tetramolecular RNA G-quadruplex in potassium | X-RAY DIFFRACTION | 1.08 | 6 | |
| 2 | 4RJ1|1|B | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 0.92 | 6 | |
| 3 | 4XK0|1|C | Crystal structure of a tetramolecular RNA G-quadruplex in potassium | X-RAY DIFFRACTION | 1.08 | 6 | |
| 4 | 1J8G|1|A | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-RAY DIFFRACTION | 0.61 | 6 | |
| 5 | 4RNE|1|B | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 1.01 | 6 | |
| 6 | 4RNE|1|D | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 1.01 | 6 | |
| 7 | 4RKV|1|A | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 0.88 | 6 | |
| 8 | 4RNE|1|C | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 1.01 | 6 | |
| 9 | 4RNE|1|A | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 1.01 | 6 | |
| 10 | 4RNE|1|F | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 1.01 | 6 | |
| 11 | 4RNE|1|E | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 1.01 | 6 | |
| 12 | 4RNE|1|H | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 1.01 | 6 | |
| 13 | 4RNE|1|G | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 1.01 | 6 | |
| 14 | 1J8G|1|C | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-RAY DIFFRACTION | 0.61 | 6 | |
| 15 | 4RJ1|1|A | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 0.92 | 6 | |
| 16 | 1J8G|1|D | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-RAY DIFFRACTION | 0.61 | 6 | |
| 17 | 4RKV|1|B | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 0.88 | 6 | |
| 18 | 1J8G|1|B | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-RAY DIFFRACTION | 0.61 | 6 | |
| 19 | 1RAU|1|A | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | SOLUTION NMR | 6 | ||
| 20 | 1RAU|1|C | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | SOLUTION NMR | 6 | ||
| 21 | 1RAU|1|B | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | SOLUTION NMR | 6 | ||
| 22 | 1RAU|1|D | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | SOLUTION NMR | 6 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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