Equivalence class NR_all_78372.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5K77|1|x (rep) | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2 | 2016-12-07 | |||
| 2 | 5K77|1|z | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2 | 2016-12-07 | |||
| 3 | 5K77|1|v | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2 | 2016-12-07 | |||
| 4 | 5K77|1|y | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2 | 2016-12-07 | |||
| 5 | 5K77|1|w | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2 | 2016-12-07 | |||
| 6 | 5F6C|1|C | RNA (5'-R(P*GP*U)-3') | Escherichia coli | The structure of E. coli RNase E catalytically inactive mutant with RNA bound | X-ray diffraction | 3 | 2 | 2016-12-14 | |||
| 7 | 1B2M|1|C | 5'-R(*GP*(U34))-3' | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-ray diffraction | 2 | 2 | 1999-03-25 | ||||
| 8 | 1B2M|1|D | 5'-R(*GP*(U34))-3' | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-ray diffraction | 2 | 2 | 1999-03-25 | ||||
| 9 | 1B2M|1|E | 5'-R(*GP*(U34))-3' | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-ray diffraction | 2 | 2 | 1999-03-25 |
Release history
| Release | 2.106 | 2.107 | 2.108 | 2.109 | 2.110 | 2.111 | 2.112 | 2.113 | 2.114 | 2.115 | 2.116 | 2.117 | 2.118 | 2.119 | 2.120 | 2.121 | 2.122 | 2.123 | 2.124 | 2.125 | 2.126 | 2.127 | 2.128 | 2.129 | 2.130 | 2.131 | 2.132 | 2.133 | 2.134 | 2.135 | 2.136 | 2.137 | 2.138 | 2.139 | 2.140 | 2.141 | 2.142 | 2.143 | 2.144 | 2.145 | 2.146 | 2.147 | 2.148 | 2.149 | 2.150 | 2.151 | 2.152 | 2.153 | 2.154 | 2.155 | 2.156 | 2.157 | 2.158 | 3.0 | 3.1 | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 |
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| Date | 2016-12-16 | 2016-12-23 | 2016-12-30 | 2017-01-06 | 2017-01-13 | 2017-01-20 | 2017-01-27 | 2017-02-03 | 2017-02-10 | 2017-02-17 | 2017-02-24 | 2017-03-03 | 2017-03-10 | 2017-03-17 | 2017-03-24 | 2017-03-31 | 2017-04-11 | 2017-04-15 | 2017-04-26 | 2017-04-29 | 2017-05-09 | 2017-05-15 | 2017-05-20 | 2017-05-27 | 2017-06-07 | 2017-06-11 | 2017-06-21 | 2017-06-24 | 2017-06-28 | 2017-07-04 | 2017-07-10 | 2017-07-15 | 2017-07-26 | 2017-07-31 | 2017-08-05 | 2017-08-12 | 2017-08-19 | 2017-08-26 | 2017-09-03 | 2017-09-09 | 2017-09-16 | 2017-09-23 | 2017-09-30 | 2017-10-07 | 2017-10-14 | 2017-10-21 | 2017-10-28 | 2017-11-03 | 2017-11-10 | 2017-11-17 | 2017-11-24 | 2017-12-01 | 2017-12-08 | 2017-12-15 | 2017-12-22 | 2017-12-29 | 2018-01-05 | 2018-01-12 | 2018-01-19 | 2018-01-26 | 2018-02-02 | 2018-02-09 | 2018-02-16 | 2018-02-23 | 2018-03-01 | 2018-03-08 | 2018-03-15 | 2018-03-22 | 2018-03-29 | 2018-04-06 | 2018-04-13 | 2018-04-20 | 2018-04-27 | 2018-05-04 | 2018-05-11 | 2018-05-18 | 2018-05-25 | 2018-06-01 | 2018-06-08 | 2018-06-15 | 2018-06-22 | 2018-06-29 | 2018-07-06 | 2018-07-13 | 2018-07-20 | 2018-07-27 | 2018-08-03 | 2018-08-10 | 2018-08-17 | 2018-08-24 | 2018-08-31 | 2018-09-07 | 2018-09-14 | 2018-09-21 | 2018-09-28 | 2018-10-05 | 2018-10-12 | 2018-10-19 | 2018-10-26 | 2018-11-02 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 5K77|1|z | Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | |
| 2 | 1B2M|1|C | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-RAY DIFFRACTION | 2 | 2 | |
| 3 | 1B2M|1|E | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-RAY DIFFRACTION | 2 | 2 | |
| 4 | 1B2M|1|D | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-RAY DIFFRACTION | 2 | 2 | |
| 5 | 5K77|1|w | Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | |
| 6 | 5F6C|1|C | The structure of E. coli RNase E catalytically inactive mutant with RNA bound | X-RAY DIFFRACTION | 3 | 2 | |
| 7 | 5K77|1|x | Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | |
| 8 | 5K77|1|y | Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | |
| 9 | 5K77|1|v | Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: