Equivalence class NR_all_83717.73 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5J7L|1|DA (rep) | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-ray diffraction | 3 | 2016-07-27 |
| 2 | 5J8A|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-ray diffraction | 3.1 | 2016-07-06 |
| 3 | 5JC9|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-ray diffraction | 3.03 | 2016-07-06 |
| 4 | 4YBB|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
| 5 | 5IT8|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 3.12 | 2016-07-27 |
| 6 | 4WOI|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-ray diffraction | 3 | 2015-08-05 |
| 7 | 4WOI|1|CA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-ray diffraction | 3 | 2015-08-05 |
| 8 | 6I7V|1|DA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Ribosomal protein paralogs bL31 and bL36 | X-ray diffraction | 2.9 | 2018-12-05 |
| 9 | 5J91|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-ray diffraction | 2.96 | 2016-07-06 |
| 10 | 4V9P|1|EA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
| 11 | 5J88|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-ray diffraction | 3.32 | 2016-07-06 |
| 12 | 4V9P|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
| 13 | 4V9P|1|GA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
| 14 | 4V9P|1|AA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
| 15 | 6LKQ|1|t | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin | X-ray diffraction | 3.1 | 2020-05-06 |
| 16 | 4V9D|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
| 17 | 4V9O|1|AA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
| 18 | 4V9O|1|EA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
| 19 | 4WWW|1|RA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
| 20 | 4V9O|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
| 21 | 4V6C|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
| 22 | 5J7L|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-ray diffraction | 3 | 2016-07-27 |
| 23 | 4V7T|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
| 24 | 4U27|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
| 25 | 4WF1|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
| 26 | 5J8A|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-ray diffraction | 3.1 | 2016-07-06 |
| 27 | 5JC9|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-ray diffraction | 3.03 | 2016-07-06 |
| 28 | 4V7U|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
| 29 | 4V7V|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
| 30 | 4V52|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
| 31 | 4U24|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
| 32 | 4U25|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
| 33 | 4V9D|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
| 34 | 4U26|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
| 35 | 4V7S|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
| 36 | 4V57|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
| 37 | 4V52|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
| 38 | 4V57|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
| 39 | 4V9O|1|GA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
| 40 | 4U1U|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
| 41 | 4V85|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome. | X-ray diffraction | 3.2 | 2014-07-09 |
| 42 | 4V54|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
| 43 | 4V64|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
| 44 | 4V50|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
| 45 | 4V54|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
| 46 | 4V64|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
| 47 | 6BY1|1|CA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli pH03H9 complex | X-ray diffraction | 3.94 | 2019-02-27 |
| 48 | 4V53|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-ray diffraction | 3.54 | 2014-07-09 |
| 49 | 4V50|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
| 50 | 4YBB|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
| 51 | 4U1V|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
| 52 | 5J88|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-ray diffraction | 3.32 | 2016-07-06 |
| 53 | 4V53|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-ray diffraction | 3.54 | 2014-07-09 |
| 54 | 4V9C|1|DA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
| 55 | 4V56|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-ray diffraction | 3.93 | 2014-07-09 |
| 56 | 4U20|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
| 57 | 4V56|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-ray diffraction | 3.93 | 2014-07-09 |
| 58 | 6I7V|1|CA | Large subunit ribosomal RNA | 23S ribsomal RNA | Escherichia coli | Bacteria | RF02541 | Ribosomal protein paralogs bL31 and bL36 | X-ray diffraction | 2.9 | 2018-12-05 |
| 59 | 6BY1|1|DA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli pH03H9 complex | X-ray diffraction | 3.94 | 2019-02-27 |
| 60 | 4U27|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
| 61 | 4V55|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-ray diffraction | 4 | 2014-07-09 |
| 62 | 4V4Q|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
| 63 | 4V55|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-ray diffraction | 4 | 2014-07-09 |
| 64 | 4V4Q|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
| 65 | 4V6D|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.81 | 2014-07-09 |
| 66 | 4U25|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
| 67 | 4U1U|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
| 68 | 4V9C|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
| 69 | 4U1V|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
| 70 | 4V89|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin) | X-ray diffraction | 3.7 | 2014-07-09 |
| 71 | 5IT8|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 3.12 | 2016-07-27 |
| 72 | 4V6E|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 2014-07-09 |
| 73 | 4WF1|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
| 74 | 4U24|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
| 75 | 4U26|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
| 76 | 4U20|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
| 77 | 4V6C|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
| 78 | 4V5Y|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-ray diffraction | 4.45 | 2014-07-09 |
| 79 | 5J91|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-ray diffraction | 2.96 | 2016-07-06 |
| 80 | 4WWW|1|YA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
| 81 | 4V7T|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
| 82 | 4V5Y|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-ray diffraction | 4.45 | 2014-07-09 |
| 83 | 4V6D|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.81 | 2014-07-09 |
| 84 | 4V7V|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
| 85 | 4V7S|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
| 86 | 4V7U|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
| 87 | 4V6E|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 2014-07-09 |
| 88 | 4V5B|1|CB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Structure of PDF binding helix in complex with the ribosome | X-ray diffraction | 3.74 | 2014-07-09 |
| 89 | 4V5B|1|AB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Structure of PDF binding helix in complex with the ribosome | X-ray diffraction | 3.74 | 2014-07-09 |
| 90 | 5J5B|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the WT E coli ribosome bound to tetracycline | X-ray diffraction | 2.8 | 2016-07-27 |
| 91 | 4V4H|1|DB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
| 92 | 4V4H|1|BB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
| 93 | 5J5B|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the WT E coli ribosome bound to tetracycline | X-ray diffraction | 2.8 | 2016-07-27 |
| 94 | 6HRM|1|1 | Small subunit ribosomal RNA | stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S d2d8 stapled ribosome | Electron microscopy | 2.96 | 2018-12-19 |
| 95 | 7K00|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 2020-09-23 |
| 96 | 6XZ7|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | Electron microscopy | 2.1 | 2020-07-22 |
| 97 | 6PJ6|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High resolution cryo-EM structure of E.coli 50S | Electron microscopy | 2.2 | 2020-01-22 |
| 98 | 6YS3|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide | Electron microscopy | 2.58 | 2020-09-30 |
| 99 | 6YSS|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state | Electron microscopy | 2.6 | 2020-08-19 |
| 100 | 6PCR|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 40o | Electron microscopy | 2.5 | 2020-06-17 |
| 101 | 6PC6|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 47 | Electron microscopy | 2.5 | 2020-06-17 |
| 102 | 6PC7|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 46 | Electron microscopy | 2.5 | 2020-06-17 |
| 103 | 6XZB|1|A2 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification). | Electron microscopy | 2.54 | 2020-11-04 |
| 104 | 6TBV|1|23S1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2) | Electron microscopy | 2.7 | 2020-01-01 |
| 105 | 6TC3|1|23S1 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1) | Electron microscopy | 2.7 | 2020-01-01 |
| 106 | 6PCQ|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to VM2 | Electron microscopy | 2.6 | 2020-06-17 |
| 107 | 6XZA|1|A2 | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli K-12 | Bacteria | RF02541 | E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification). | Electron microscopy | 2.66 | 2020-11-04 |
| 108 | 6QDW|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide | Electron microscopy | 2.83 | 2020-01-15 |
| 109 | 6PC5|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compounds 46 and VS1 | Electron microscopy | 2.7 | 2020-06-17 |
| 110 | 5AFI|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
| 111 | 6WYV|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compounds 47 and VS1 | Electron microscopy | 2.75 | 2020-06-17 |
| 112 | 6PCT|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 41q | Electron microscopy | 2.8 | 2020-06-17 |
| 113 | 6U48|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S with phazolicin (PHZ) bound in exit tunnel | Electron microscopy | 2.87 | 2019-09-18 |
| 114 | 6Y69|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX | Electron microscopy | 2.86 | 2020-07-01 |
| 115 | 6PCS|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 40e | Electron microscopy | 2.8 | 2020-06-17 |
| 116 | 6WNT|1|4 | 23s-5s joint ribosomal RNA | 23s-5s joint ribosomal RNA | Escherichia coli | Bacteria | RF00001 | 50S ribosomal subunit without free 5S rRNA and perturbed PTC | Electron microscopy | 3.1 | 2020-06-24 |
| 117 | 5NWY|1|N | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex | Electron microscopy | 2.9 | 2017-07-19 |
| 118 | 6WD0|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | Electron microscopy | 3 | 2020-07-01 |
| 119 | 6WDE|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) | Electron microscopy | 3 | 2020-07-01 |
| 120 | 5H5U|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Mechanistic insights into the alternative translation termination by ArfA and RF2 | Electron microscopy | 3.01 | 2017-01-25 |
| 121 | 6ORE|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Release complex 70S | Electron microscopy | 2.9 | 2019-06-19 |
| 122 | 6PC8|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 40q | Electron microscopy | 2.9 | 2020-06-17 |
| 123 | 5MDV|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | Electron microscopy | 2.97 | 2016-12-14 |
| 124 | 6H4N|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome | Electron microscopy | 3 | 2018-09-05 |
| 125 | 6WNW|1|4 | 23s-5s joint ribosomal RNA | 23s-5s joint ribosomal RNA | Escherichia coli | Bacteria | RF00001 | Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA | Electron microscopy | 3.2 | 2020-06-24 |
| 126 | 6ZU1|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in uncoupled state 2 | Electron microscopy | 3 | 2020-09-16 |
| 127 | 6ZTP|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in uncoupled state 6 | Electron microscopy | 3 | 2020-09-16 |
| 128 | 6ZTO|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in uncoupled state 1 | Electron microscopy | 3 | 2020-09-23 |
| 129 | 6PCH|1|I | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S ribosome bound to compound 21 | Electron microscopy | 2.9 | 2020-06-17 |
| 130 | 6OM6|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | Electron microscopy | 3.1 | 2021-02-10 |
| 131 | 6X7K|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.1 | 2020-09-02 |
| 132 | 6YSR|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the P+9 stalled ribosome complex | Electron microscopy | 3.1 | 2020-08-19 |
| 133 | 5MDW|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state) | Electron microscopy | 3.06 | 2016-12-14 |
| 134 | 6SZS|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis | Electron microscopy | 3.06 | 2019-12-04 |
| 135 | 5MGP|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs | Electron microscopy | 3.1 | 2016-12-14 |
| 136 | 5MDZ|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S ribosome (empty A site) | Electron microscopy | 3.1 | 2016-12-14 |
| 137 | 6S0K|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA, tRNA-CCA | Escherichia coli | Bacteria | RF02541 | Ribosome nascent chain in complex with SecA | Electron microscopy | 3.1 | 2019-10-09 |
| 138 | 5U9G|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I) | Electron microscopy | 3.2 | 2017-03-22 |
| 139 | 5U9F|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II) | Electron microscopy | 3.2 | 2017-03-22 |
| 140 | 6WDD|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A) | Electron microscopy | 3.2 | 2020-07-01 |
| 141 | 5UYM|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III) | Electron microscopy | 3.2 | 2017-06-07 |
| 142 | 6ENU|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P) | Electron microscopy | 3.1 | 2017-11-22 |
| 143 | 6X6T|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.2 | 2020-09-02 |
| 144 | 6YST|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state | Electron microscopy | 3.2 | 2020-08-19 |
| 145 | 6QUL|1|A | Large subunit ribosomal RNA | 23S rRNA, P-site fMet-tRNA(fMet) | Escherichia coli | Bacteria | RF02541 | Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid | Electron microscopy | 3 | 2019-04-10 |
| 146 | 6VWL|1|2 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation) | Electron microscopy | 3.1 | 2020-06-03 |
| 147 | 5WFS|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | Electron microscopy | 3 | 2018-05-02 |
| 148 | 7JT1|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III) | Electron microscopy | 3.3 | 2020-11-11 |
| 149 | 6WDG|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B) | Electron microscopy | 3.3 | 2020-07-01 |
| 150 | 6WDF|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A) | Electron microscopy | 3.3 | 2020-07-01 |
| 151 | 6WD1|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B) | Electron microscopy | 3.3 | 2020-07-01 |
| 152 | 6OG7|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II) | Electron microscopy | 3.3 | 2019-09-25 |
| 153 | 5WE4|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu wt complex with GppNHp | Electron microscopy | 3.1 | 2018-04-25 |
| 154 | 6OFX|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Non-rotated ribosome (Structure I) | Electron microscopy | 3.3 | 2019-09-25 |
| 155 | 3JBV|1|b | Large subunit ribosomal RNA | RNA (2903-MER) | Escherichia coli | Bacteria | RF02541 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.32 | 2016-01-27 |
| 156 | 6C4I|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Conformation of methylated GGQ in the peptidyl transferase center during translation termination | Electron microscopy | 3.24 | 2018-02-21 |
| 157 | 5WDT|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GppNHp | Electron microscopy | 3 | 2018-04-25 |
| 158 | 7BV8|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Mature 50S ribosomal subunit from RrmJ knock out E.coli strain | Electron microscopy | 3.14 | 2020-07-01 |
| 159 | 6ENF|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P | Electron microscopy | 3.2 | 2017-11-22 |
| 160 | 6WNV|1|4 | 23s-5s joint ribosomal RNA | 23s-5s joint ribosomal RNA | Escherichia coli | Bacteria | RF00001 | 70S ribosome without free 5S rRNA and with a perturbed PTC | Electron microscopy | 3.5 | 2020-06-24 |
| 161 | 6OGI|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V) | Electron microscopy | 3.4 | 2019-09-25 |
| 162 | 5GAE|1|A | Large subunit ribosomal RNA | 23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3') | Escherichia coli | Bacteria | RF02541 | RNC in complex with a translocating SecYEG | Electron microscopy | 3.33 | 2016-01-27 |
| 163 | 3JCE|1|A | Large subunit ribosomal RNA | 23 ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | Electron microscopy | 3.2 | 2016-01-13 |
| 164 | 5MDY|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state) | Electron microscopy | 3.35 | 2016-12-21 |
| 165 | 5LZD|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA) | Electron microscopy | 3.4 | 2016-11-23 |
| 166 | 7D6Z|1|A | Large subunit ribosomal RNA | 23S ribosomal rRNA | Escherichia coli | Bacteria | RF02541 | Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor | Electron microscopy | 3.4 | 2021-04-07 |
| 167 | 6ZTM|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in collided state without NusG | Electron microscopy | 3.3 | 2020-09-16 |
| 168 | 5WE6|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA | Electron microscopy | 3.4 | 2018-04-25 |
| 169 | 6I0Y|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel | Electron microscopy | 3.2 | 2018-12-05 |
| 170 | 7JT2|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | 70S ribosome stalled on long mRNA with ArfB bound in the A site | Electron microscopy | 3.5 | 2020-11-11 |
| 171 | 6X7F|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.5 | 2020-09-02 |
| 172 | 6BU8|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome with S1 domains 1 and 2 (Class 1) | Electron microscopy | 3.5 | 2018-01-31 |
| 173 | 5WFK|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3) | Electron microscopy | 3.4 | 2018-05-02 |
| 174 | 5O2R|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome | Electron microscopy | 3.4 | 2017-07-26 |
| 175 | 5LZE|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C) | Electron microscopy | 3.5 | 2016-11-23 |
| 176 | 6ZTJ|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA) | Electron microscopy | 3.4 | 2020-09-16 |
| 177 | 5U4I|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | Electron microscopy | 3.5 | 2017-01-11 |
| 178 | 6VWN|1|2 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II) | Electron microscopy | 3.4 | 2020-06-03 |
| 179 | 6VWM|1|2 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I) | Electron microscopy | 3.4 | 2020-06-03 |
| 180 | 5UYL|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II) | Electron microscopy | 3.6 | 2017-06-14 |
| 181 | 6WD2|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A) | Electron microscopy | 3.6 | 2020-07-08 |
| 182 | 6WDK|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2) | Electron microscopy | 3.6 | 2020-07-08 |
| 183 | 6WD5|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1) | Electron microscopy | 3.6 | 2020-07-08 |
| 184 | 6WDM|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2) | Electron microscopy | 3.6 | 2020-07-01 |
| 185 | 6WD3|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1) | Electron microscopy | 3.6 | 2020-07-08 |
| 186 | 5IQR|1|1 | Large subunit ribosomal RNA | LSU rRNA | Escherichia coli | Bacteria | RF02541 | Structure of RelA bound to the 70S ribosome | Electron microscopy | 3 | 2016-05-04 |
| 187 | 6OSQ|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | RF1 accommodated state bound Release complex 70S at long incubation time point | Electron microscopy | 3.5 | 2019-06-26 |
| 188 | 3JBU|1|b | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.64 | 2016-01-27 |
| 189 | 5LZA|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC) | Electron microscopy | 3.6 | 2016-11-23 |
| 190 | 5KCR|1|1A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution | Electron microscopy | 3.6 | 2016-08-17 |
| 191 | 5JU8|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA | Electron microscopy | 3.6 | 2016-07-20 |
| 192 | 5JTE|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA | Electron microscopy | 3.6 | 2016-07-20 |
| 193 | 7JT3|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV) | Electron microscopy | 3.7 | 2020-11-11 |
| 194 | 7JSZ|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV) | Electron microscopy | 3.7 | 2020-11-11 |
| 195 | 7JSS|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II) | Electron microscopy | 3.7 | 2020-11-11 |
| 196 | 6WDJ|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1) | Electron microscopy | 3.7 | 2020-07-01 |
| 197 | 6WD4|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2) | Electron microscopy | 3.7 | 2020-07-08 |
| 198 | 6WD8|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A) | Electron microscopy | 3.7 | 2020-07-08 |
| 199 | 6WD6|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2) | Electron microscopy | 3.7 | 2020-07-08 |
| 200 | 6WD9|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B) | Electron microscopy | 3.7 | 2020-07-08 |
| 201 | 6WDL|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1) | Electron microscopy | 3.7 | 2020-07-01 |
| 202 | 6XDQ|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 3.7 | 2020-09-02 |
| 203 | 6VYS|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex A1 (TTC-A1) containing a 21 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 3.7 | 2020-09-02 |
| 204 | 6VYQ|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 3.7 | 2020-09-02 |
| 205 | 6VU3|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer | Electron microscopy | 3.7 | 2020-09-02 |
| 206 | 6YSU|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state | Electron microscopy | 3.7 | 2020-08-19 |
| 207 | 6ORL|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | RF1 pre-accommodated 70S complex at 24 ms | Electron microscopy | 3.5 | 2019-06-19 |
| 208 | 6OSK|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | RF1 accommodated 70S complex at 60 ms | Electron microscopy | 3.6 | 2019-06-26 |
| 209 | 3J9Z|1|LA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | Electron microscopy | 3.6 | 2015-07-01 |
| 210 | 6DNC|1|B | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon | Electron microscopy | 3.7 | 2018-07-04 |
| 211 | 3JCJ|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association | Electron microscopy | 3.7 | 2016-03-09 |
| 212 | 5WF0|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) | Electron microscopy | 3.6 | 2018-05-02 |
| 213 | 7JSW|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli K-12 | Bacteria | RF02541 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III) | Electron microscopy | 3.8 | 2020-11-11 |
| 214 | 5UYQ|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc) | Electron microscopy | 3.8 | 2017-06-07 |
| 215 | 6WDA|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C) | Electron microscopy | 3.8 | 2020-07-08 |
| 216 | 6VYR|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 3.8 | 2020-09-02 |
| 217 | 6ENJ|1|A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) | Electron microscopy | 3.7 | 2017-11-22 |
| 218 | 6Q9A|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome | Electron microscopy | 3.7 | 2019-04-17 |
| 219 | 5L3P|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex | Electron microscopy | 3.7 | 2016-07-20 |
| 220 | 5GAD|1|A | Large subunit ribosomal RNA | 23S rRNA, tRNA CCAend | Escherichia coli | Bacteria | RF02541 | RNC-SRP-SR complex early state | Electron microscopy | 3.7 | 2016-01-27 |
| 221 | 6GC8|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 50S ribosomal subunit assembly intermediate - 50S rec* | Electron microscopy | 3.8 | 2018-06-20 |
| 222 | 5UYP|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc) | Electron microscopy | 3.9 | 2017-06-07 |
| 223 | 5UYK|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I) | Electron microscopy | 3.9 | 2017-06-07 |
| 224 | 6OGF|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III). | Electron microscopy | 3.9 | 2019-09-25 |
| 225 | 6WD7|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D) | Electron microscopy | 3.9 | 2020-07-08 |
| 226 | 6ZTL|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in collided state bound to NusG | Electron microscopy | 3.5 | 2020-09-16 |
| 227 | 6GWT|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I) | Electron microscopy | 3.8 | 2018-08-15 |
| 228 | 6OUO|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | RF2 accommodated state bound 70S complex at long incubation time | Electron microscopy | 3.7 | 2019-06-19 |
| 229 | 5KPW|1|27 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III) | Electron microscopy | 3.9 | 2016-09-28 |
| 230 | 6GXM|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II) | Electron microscopy | 3.8 | 2018-08-22 |
| 231 | 5GAG|1|A | Large subunit ribosomal RNA | 23S rRNA, tRNA CCAend | Escherichia coli | Bacteria | RF02541 | RNC in complex with SRP-SR in the closed state | Electron microscopy | 3.8 | 2016-01-27 |
| 232 | 5GAH|1|A | Large subunit ribosomal RNA | 23S rRNA, tRNA CCAend | Escherichia coli | Bacteria | RF02541 | RNC in complex with SRP with detached NG domain | Electron microscopy | 3.8 | 2016-01-27 |
| 233 | 6GBZ|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 50S ribosomal subunit assembly intermediate state 5 | Electron microscopy | 3.8 | 2018-06-20 |
| 234 | 5KPS|1|28 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) | Electron microscopy | 3.9 | 2016-09-28 |
| 235 | 5UYN|1|01 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc) | Electron microscopy | 4 | 2017-06-07 |
| 236 | 6WDI|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2) | Electron microscopy | 4 | 2020-07-01 |
| 237 | 6WDB|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A) | Electron microscopy | 4 | 2020-07-01 |
| 238 | 6GC0|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 50S ribosomal subunit assembly intermediate state 4 | Electron microscopy | 3.8 | 2018-06-20 |
| 239 | 3J9Y|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | Electron microscopy | 3.9 | 2015-04-15 |
| 240 | 6GXO|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV) | Electron microscopy | 3.9 | 2018-08-15 |
| 241 | 6GXN|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III) | Electron microscopy | 3.9 | 2018-08-15 |
| 242 | 6O9K|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S initiation complex | Electron microscopy | 4 | 2019-05-29 |
| 243 | 6O9J|1|B | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | 70S Elongation Competent Ribosome | Electron microscopy | 3.9 | 2019-05-29 |
| 244 | 5KPX|1|27 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV) | Electron microscopy | 3.9 | 2016-09-28 |
| 245 | 3JCD|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4) | Electron microscopy | 3.7 | 2016-01-13 |
| 246 | 4UY8|1|A | Large subunit ribosomal RNA | RRNA-23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome | Electron microscopy | 3.8 | 2014-10-29 |
| 247 | 7D80|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase | Electron microscopy | 4.1 | 2021-04-07 |
| 248 | 5KCS|1|1A | Large subunit ribosomal RNA | 23S Ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution | Electron microscopy | 3.9 | 2016-08-17 |
| 249 | 6VZJ|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex A1 (TTC-A1) containing mRNA with a 15 nt long spacer, fMet-tRNAs at E-site and P-site, and lacking transcription factor NusG | Electron microscopy | 4.1 | 2020-09-02 |
| 250 | 6OT3|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | RF2 accommodated state bound Release complex 70S at 24 ms | Electron microscopy | 3.9 | 2019-06-19 |
| 251 | 6Q97|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome | Electron microscopy | 3.9 | 2019-03-13 |
| 252 | 6ZTN|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA) | Electron microscopy | 3.9 | 2020-09-16 |
| 253 | 6OGG|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV). | Electron microscopy | 4.2 | 2019-09-25 |
| 254 | 6WDC|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B) | Electron microscopy | 4.2 | 2020-07-01 |
| 255 | 3J7Z|1|A | Large subunit ribosomal RNA | 23S rRNA, P-tRNA CCA-end | Escherichia coli | Bacteria | RF02541 | Structure of the E. coli 50S subunit with ErmCL nascent chain | Electron microscopy | 3.9 | 2014-10-22 |
| 256 | 5NP6|1|Y | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S structure prior to bypassing | Electron microscopy | 3.6 | 2017-06-14 |
| 257 | 6WDH|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1) | Electron microscopy | 4.3 | 2020-07-01 |
| 258 | 5KPV|1|27 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II) | Electron microscopy | 4.1 | 2016-09-28 |
| 259 | 5GAF|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA, tRNA CCAend | Escherichia coli | Bacteria | RF02541 | RNC in complex with SRP | Electron microscopy | 4.3 | 2016-02-03 |
| 260 | 6GXP|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only) | Electron microscopy | 4.4 | 2018-08-15 |
| 261 | 6Q98|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome | Electron microscopy | 4.3 | 2019-02-27 |
| 262 | 3JA1|1|LA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | Electron microscopy | 3.6 | 2015-07-01 |
| 263 | 3JCN|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I | Electron microscopy | 4.6 | 2016-03-09 |
| 264 | 6OST|1|1 | Large subunit ribosomal RNA | 23S Ribosomal RNA | Escherichia coli | Bacteria | RF02541 | RF2 pre-accommodated state bound Release complex 70S at 24ms | Electron microscopy | 4.2 | 2019-06-19 |
| 265 | 6GC4|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 50S ribosomal subunit assembly intermediate state 3 | Electron microscopy | 4.3 | 2018-07-04 |
| 266 | 5LZF|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H) | Electron microscopy | 4.6 | 2016-11-23 |
| 267 | 6XDR|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex B (TTC-B) containing an 27 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 4.7 | 2020-09-02 |
| 268 | 6X9Q|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 27 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 4.8 | 2020-09-02 |
| 269 | 5LZC|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR) | Electron microscopy | 4.8 | 2016-11-23 |
| 270 | 5NCO|1|A | Large subunit ribosomal RNA | 23S rRNA, P-site tRNA-CCA end | Escherichia coli | Bacteria | RF02541 | Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome | Electron microscopy | 4.8 | 2017-05-24 |
| 271 | 6XGF|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex B (TTC-B) containing an 30 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 5 | 2020-09-02 |
| 272 | 6GC6|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 50S ribosomal subunit assembly intermediate state 2 | Electron microscopy | 4.3 | 2018-07-04 |
| 273 | 6C4H|1|A | Large subunit ribosomal RNA | 23S rRNA, P-site tRNA fMet | Escherichia coli | Bacteria | RF02541 | Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region) | Electron microscopy | 3.1 | 2018-02-21 |
| 274 | 6GC7|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 50S ribosomal subunit assembly intermediate state 1 | Electron microscopy | 4.3 | 2018-06-20 |
| 275 | 5LZB|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB) | Electron microscopy | 5.3 | 2016-11-23 |
| 276 | 4CSU|1|B | Large subunit ribosomal RNA | 23S RRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structures of the 50S ribosome subunit bound with ObgE | Electron microscopy | 5.5 | 2014-06-04 |
| 277 | 4V5H|1|BB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | Electron microscopy | 5.8 | 2014-07-09 |
| 278 | 5U4J|1|A | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | Electron microscopy | 3.7 | 2017-01-11 |
| 279 | 3J8G|1|B | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit | Electron microscopy | 5 | 2014-11-26 |
| 280 | 4V69|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Ternary complex-bound E.coli 70S ribosome. | Electron microscopy | 6.7 | 2014-07-09 |
| 281 | 5AKA|1|B | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | EM structure of ribosome-SRP-FtsY complex in closed state | Electron microscopy | 5.7 | 2015-03-25 |
| 282 | 6VZ7|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 7 | 2020-09-02 |
| 283 | 6VYU|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer | Electron microscopy | 7 | 2020-09-02 |
| 284 | 6VYW|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex C3 (TTC-C3) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 7 | 2020-09-02 |
| 285 | 6XII|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex B (TTC-B) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 7 | 2020-09-02 |
| 286 | 4V6M|1|B8 | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Structure of the ribosome-SecYE complex in the membrane environment | Electron microscopy | 7.1 | 2014-07-09 |
| 287 | 4V7B|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Visualization of two tRNAs trapped in transit during EF-G-mediated translocation | Electron microscopy | 6.8 | 2014-07-09 |
| 288 | 5ADY|1|B | Large subunit ribosomal RNA | 23S RRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structures of the 50S ribosome subunit bound with HflX | Electron microscopy | 4.5 | 2015-10-14 |
| 289 | 3J5L|1|A | Large subunit ribosomal RNA | 23S ribsomal RNA, 5'-R(*CP*(MA6))-3', 5'-R(*CP*CP*A)-3' | Escherichia coli | Bacteria | RF02541 | Structure of the E. coli 50S subunit with ErmBL nascent chain | Electron microscopy | 6.6 | 2014-03-26 |
| 290 | 4V7C|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure) | Electron microscopy | 7.6 | 2014-07-09 |
| 291 | 4V7D|1|AA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure) | Electron microscopy | 7.6 | 2014-07-09 |
| 292 | 6H58|1|AA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome | Electron microscopy | 7.9 | 2018-09-05 |
| 293 | 6H58|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome | Electron microscopy | 7.9 | 2018-09-05 |
| 294 | 6XIJ|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex A (TTC-A) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 8 | 2020-09-02 |
| 295 | 5ZZM|1|N | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | E. coli 50S subunit bound HflX protein in presence of ATP (AMP-PNP) and GTP (GMP-PNP) analogs. | Electron microscopy | 8.1 | 2018-06-27 |
| 296 | 4V6K|1|AB | Large subunit ribosomal RNA | ribosomal RNA 23S | Escherichia coli | Bacteria | RF02541 | Structural insights into cognate vs. near-cognate discrimination during decoding. | Electron microscopy | 8.25 | 2014-07-09 |
| 297 | 6VZ3|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex D2 (TTC-D2) containing mRNA with a 27 nt long spacer | Electron microscopy | 8.9 | 2020-09-02 |
| 298 | 6VZ5|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex D3 (TTC-D3) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 8.9 | 2020-09-02 |
| 299 | 4V7A|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4) | Electron microscopy | 9 | 2014-07-09 |
| 300 | 4V65|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E. coli ribosome in the Pre-accommodation state | Electron microscopy | 9 | 2014-07-09 |
| 301 | 4V66|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E. coli ribosome and the tRNAs in Post-accommodation state | Electron microscopy | 9 | 2014-07-09 |
| 302 | 4V6T|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading | Electron microscopy | 8.3 | 2014-07-09 |
| 303 | 2J28|1|B | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | MODEL OF E. COLI SRP BOUND TO 70S RNCS | Electron microscopy | 9.5 | 2006-11-08 |
| 304 | 2RDO|1|B | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | 50S subunit with EF-G(GDPNP) and RRF bound | Electron microscopy | 9.1 | 2008-03-04 |
| 305 | 4V6V|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Tetracycline resistance protein Tet(O) bound to the ribosome | Electron microscopy | 9.8 | 2014-07-09 |
| 306 | 6VYX|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex C4 (TTC-C4) containing mRNA with a 21 nt long spacer, transcription factor NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 9.9 | 2020-09-02 |
| 307 | 6VYZ|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex C6 (TTC-C6) containing mRNA with a 21 nt long spacer, NusA, and fMet-tRNAs at E-site and P-site | Electron microscopy | 9.9 | 2020-09-02 |
| 308 | 6VYY|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex C5 (TTC-C5) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 9.9 | 2020-09-02 |
| 309 | 6VZ2|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex D1 (TTC-D1) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site | Electron microscopy | 10 | 2020-09-02 |
| 310 | 3DG2|1|B | Large subunit ribosomal RNA | 23S Ribosomal RNA from E. coli | Escherichia coli | Bacteria | RF02541 | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex | Electron microscopy | 10 | 2009-02-03 |
| 311 | 3DG0|1|B | Large subunit ribosomal RNA | 23S Ribosomal RNA from E. coli | Escherichia coli | Bacteria | RF02541 | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex | Electron microscopy | 10.8 | 2009-02-03 |
| 312 | 4V6R|1|BB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes) | Electron microscopy | 11.5 | 2014-07-09 |
| 313 | 4V6Q|1|BB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes) | Electron microscopy | 11.5 | 2014-07-09 |
| 314 | 4V7I|1|A8 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Ribosome-SecY complex. | Electron microscopy | 9.6 | 2014-07-09 |
| 315 | 4V48|1|A0 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome | Electron microscopy | 11.5 | 2014-07-09 |
| 316 | 4V75|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1) | Electron microscopy | 12 | 2014-07-09 |
| 317 | 4V6Z|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b) | Electron microscopy | 12 | 2014-07-09 |
| 318 | 4V6Y|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a) | Electron microscopy | 12 | 2014-07-09 |
| 319 | 3BBX|1|B | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex | Electron microscopy | 10 | 2008-10-21 |
| 320 | 4V6N|1|AB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes) | Electron microscopy | 12.1 | 2014-07-09 |
| 321 | 4V47|1|A0 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome | Electron microscopy | 12.3 | 2014-07-09 |
| 322 | 4V72|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4) | Electron microscopy | 13 | 2014-07-09 |
| 323 | 4V6S|1|AB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes) | Electron microscopy | 13.1 | 2014-07-09 |
| 324 | 4V6L|1|BB | Large subunit ribosomal RNA | 50S ribosomal RNA 23S | Escherichia coli | Bacteria | RF02541 | Structural insights into cognate vs. near-cognate discrimination during decoding. | Electron microscopy | 13.2 | 2014-07-09 |
| 325 | 3DG4|1|B | Large subunit ribosomal RNA | 23S RibosomaL RNA from E. coli | Escherichia coli | Bacteria | RF02541 | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex | Electron microscopy | 12.8 | 2009-02-03 |
| 326 | 4V6P|1|BB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes) | Electron microscopy | 13.5 | 2014-07-09 |
| 327 | 6VYT|1|a | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Escherichia coli transcription-translation complex A2 (TTC-A2) containing a 15 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site | Electron microscopy | 14 | 2020-09-02 |
| 328 | 4V6O|1|BB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes) | Electron microscopy | 14.7 | 2014-07-09 |
| 329 | 4V73|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a) | Electron microscopy | 15 | 2014-07-09 |
| 330 | 4V79|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b) | Electron microscopy | 15 | 2014-07-09 |
| 331 | 3DG5|1|B | Large subunit ribosomal RNA | 23S Ribosomal RNA from E. coli | Escherichia coli | Bacteria | RF02541 | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex | Electron microscopy | 15.5 | 2009-02-03 |
| 332 | 4V4W|1|B0 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 | Electron microscopy | 15 | 2014-07-09 |
| 333 | 4V4V|1|B0 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 | Electron microscopy | 15 | 2014-07-09 |
| 334 | 4V76|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a) | Electron microscopy | 17 | 2014-07-09 |
| 335 | 4V70|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3) | Electron microscopy | 17 | 2014-07-09 |
| 336 | 4V74|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b) | Electron microscopy | 17 | 2014-07-09 |
| 337 | 4V77|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b) | Electron microscopy | 17 | 2014-07-09 |
| 338 | 4V78|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a) | Electron microscopy | 20 | 2014-07-09 |
| 339 | 4V71|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2) | Electron microscopy | 20 | 2014-07-09 |
Release history
Parents
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 6HRM|1|1 | E. coli 70S d2d8 stapled ribosome | ELECTRON MICROSCOPY | 2.96 | 4417 | |
| 2 | 3J8G|1|B | Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit | ELECTRON MICROSCOPY | 5 | 2874 | |
| 3 | 4V4W|1|B0 | Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 | ELECTRON MICROSCOPY | 15 | 2740 | |
| 4 | 4V4V|1|B0 | Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 | ELECTRON MICROSCOPY | 15 | 2740 | |
| 5 | 3BBX|1|B | The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex | ELECTRON MICROSCOPY | 10 | 2902 | |
| 6 | 4V66|1|BB | Structure of the E. coli ribosome and the tRNAs in Post-accommodation state | ELECTRON MICROSCOPY | 9 | 2903 | |
| 7 | 4V65|1|BB | Structure of the E. coli ribosome in the Pre-accommodation state | ELECTRON MICROSCOPY | 9 | 2903 | |
| 8 | 4V75|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1) | ELECTRON MICROSCOPY | 12 | 2903 | |
| 9 | 4V70|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3) | ELECTRON MICROSCOPY | 17 | 2903 | |
| 10 | 4V72|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4) | ELECTRON MICROSCOPY | 13 | 2903 | |
| 11 | 4V74|1|BA | 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b) | ELECTRON MICROSCOPY | 17 | 2903 | |
| 12 | 4V73|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a) | ELECTRON MICROSCOPY | 15 | 2903 | |
| 13 | 4V76|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a) | ELECTRON MICROSCOPY | 17 | 2903 | |
| 14 | 4V77|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b) | ELECTRON MICROSCOPY | 17 | 2903 | |
| 15 | 4V78|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a) | ELECTRON MICROSCOPY | 20 | 2903 | |
| 16 | 4V6Z|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b) | ELECTRON MICROSCOPY | 12 | 2903 | |
| 17 | 4V79|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b) | ELECTRON MICROSCOPY | 15 | 2903 | |
| 18 | 4V71|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2) | ELECTRON MICROSCOPY | 20 | 2903 | |
| 19 | 4V6Y|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a) | ELECTRON MICROSCOPY | 12 | 2903 | |
| 20 | 4V7A|1|BA | E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4) | ELECTRON MICROSCOPY | 9 | 2903 | |
| 21 | 6GBZ|1|A | 50S ribosomal subunit assembly intermediate state 5 | ELECTRON MICROSCOPY | 3.8 | 2789 | |
| 22 | 6GC0|1|A | 50S ribosomal subunit assembly intermediate state 4 | ELECTRON MICROSCOPY | 3.8 | 2729 | |
| 23 | 6GC4|1|A | 50S ribosomal subunit assembly intermediate state 3 | ELECTRON MICROSCOPY | 4.3 | 2586 | |
| 24 | 6GC6|1|A | 50S ribosomal subunit assembly intermediate state 2 | ELECTRON MICROSCOPY | 4.3 | 2092 | |
| 25 | 6GC7|1|A | 50S ribosomal subunit assembly intermediate state 1 | ELECTRON MICROSCOPY | 4.3 | 1901 | |
| 26 | 4CSU|1|B | Cryo-EM structures of the 50S ribosome subunit bound with ObgE | ELECTRON MICROSCOPY | 5.5 | 2903 | |
| 27 | 4V6Q|1|BB | Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes) | ELECTRON MICROSCOPY | 11.5 | 2880 | |
| 28 | 4V6R|1|BB | Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes) | ELECTRON MICROSCOPY | 11.5 | 2880 | |
| 29 | 4V6P|1|BB | Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes) | ELECTRON MICROSCOPY | 13.5 | 2880 | |
| 30 | 4V6O|1|BB | Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes) | ELECTRON MICROSCOPY | 14.7 | 2880 | |
| 31 | 4V6S|1|AB | Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes) | ELECTRON MICROSCOPY | 13.1 | 2880 | |
| 32 | 4V6N|1|AB | Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes) | ELECTRON MICROSCOPY | 12.1 | 2880 | |
| 33 | 4V6V|1|BA | Tetracycline resistance protein Tet(O) bound to the ribosome | ELECTRON MICROSCOPY | 9.8 | 2881 | |
| 34 | 4V6M|1|B8 | Structure of the ribosome-SecYE complex in the membrane environment | ELECTRON MICROSCOPY | 7.1 | 2904 | |
| 35 | 4V5H|1|BB | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | ELECTRON MICROSCOPY | 5.8 | 2903 | |
| 36 | 6YS3|1|b | Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide | ELECTRON MICROSCOPY | 2.58 | 2888 | |
| 37 | 6QDW|1|b | Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide | ELECTRON MICROSCOPY | 2.83 | 2888 | |
| 38 | 3JBU|1|b | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | ELECTRON MICROSCOPY | 3.64 | 2903 | |
| 39 | 4V7I|1|A8 | Ribosome-SecY complex. | ELECTRON MICROSCOPY | 9.6 | 2903 | |
| 40 | 6O9K|1|A | 70S initiation complex | ELECTRON MICROSCOPY | 4 | 2854 | |
| 41 | 5ADY|1|B | Cryo-EM structures of the 50S ribosome subunit bound with HflX | ELECTRON MICROSCOPY | 4.5 | 2903 | |
| 42 | 4V6L|1|BB | Structural insights into cognate vs. near-cognate discrimination during decoding. | ELECTRON MICROSCOPY | 13.2 | 2880 | |
| 43 | 4V6K|1|AB | Structural insights into cognate vs. near-cognate discrimination during decoding. | ELECTRON MICROSCOPY | 8.25 | 2880 | |
| 44 | 5NP6|1|Y | 70S structure prior to bypassing | ELECTRON MICROSCOPY | 3.6 | 2879 | |
| 45 | 7BV8|1|A | Mature 50S ribosomal subunit from RrmJ knock out E.coli strain | ELECTRON MICROSCOPY | 3.14 | 2900 | |
| 46 | 6GC8|1|A | 50S ribosomal subunit assembly intermediate - 50S rec* | ELECTRON MICROSCOPY | 3.8 | 2897 | |
| 47 | 6WNT|1|4 | 50S ribosomal subunit without free 5S rRNA and perturbed PTC | ELECTRON MICROSCOPY | 3.1 | 3025 | |
| 48 | 6WNV|1|4 | 70S ribosome without free 5S rRNA and with a perturbed PTC | ELECTRON MICROSCOPY | 3.5 | 3025 | |
| 49 | 2J28|1|B | MODEL OF E. COLI SRP BOUND TO 70S RNCS | ELECTRON MICROSCOPY | 9.5 | 2841 | |
| 50 | 4V4Q|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-RAY DIFFRACTION | 3.46 | 2841 | |
| 51 | 4V4H|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-RAY DIFFRACTION | 3.46 | 2841 | |
| 52 | 4V54|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 3.3 | 2841 | |
| 53 | 4V55|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4 | 2841 | |
| 54 | 4V53|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-RAY DIFFRACTION | 3.54 | 2841 | |
| 55 | 4V52|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-RAY DIFFRACTION | 3.21 | 2841 | |
| 56 | 4V5Y|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4.45 | 2841 | |
| 57 | 4V64|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-RAY DIFFRACTION | 3.5 | 2841 | |
| 58 | 4V57|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-RAY DIFFRACTION | 3.5 | 2841 | |
| 59 | 4V56|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-RAY DIFFRACTION | 3.93 | 2841 | |
| 60 | 4V50|1|DB | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-RAY DIFFRACTION | 3.22 | 2841 | |
| 61 | 4V5B|1|CB | Structure of PDF binding helix in complex with the ribosome | X-RAY DIFFRACTION | 3.74 | 2841 | |
| 62 | 6BY1|1|DA | E. coli pH03H9 complex | X-RAY DIFFRACTION | 3.94 | 2869 | |
| 63 | 6XZ7|1|A | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | ELECTRON MICROSCOPY | 2.1 | 2876 | |
| 64 | 6XZB|1|A2 | E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification). | ELECTRON MICROSCOPY | 2.54 | 2878 | |
| 65 | 6XZA|1|A2 | E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification). | ELECTRON MICROSCOPY | 2.66 | 2878 | |
| 66 | 6I7V|1|DA | Ribosomal protein paralogs bL31 and bL36 | X-RAY DIFFRACTION | 2.9 | 2875 | |
| 67 | 5IT8|1|DA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 3.12 | 2886 | |
| 68 | 5JC9|1|DA | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-RAY DIFFRACTION | 3.03 | 2886 | |
| 69 | 5J7L|1|DA | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-RAY DIFFRACTION | 3 | 2886 | |
| 70 | 5J8A|1|DA | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-RAY DIFFRACTION | 3.1 | 2886 | |
| 71 | 5J91|1|DA | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-RAY DIFFRACTION | 2.96 | 2886 | |
| 72 | 5J5B|1|DA | Structure of the WT E coli ribosome bound to tetracycline | X-RAY DIFFRACTION | 2.8 | 2886 | |
| 73 | 4YBB|1|DA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2883 | |
| 74 | 5KCR|1|1A | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution | ELECTRON MICROSCOPY | 3.6 | 2883 | |
| 75 | 5J88|1|DA | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-RAY DIFFRACTION | 3.32 | 2886 | |
| 76 | 4V6E|1|BA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.71 | 2854 | |
| 77 | 4V6D|1|BA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.81 | 2854 | |
| 78 | 4WWW|1|RA | Crystal structure of the E. coli ribosome bound to CEM-101 | X-RAY DIFFRACTION | 3.1 | 2854 | |
| 79 | 4V7S|1|BA | Crystal structure of the E. coli ribosome bound to telithromycin. | X-RAY DIFFRACTION | 3.25 | 2854 | |
| 80 | 4V7T|1|BA | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-RAY DIFFRACTION | 3.19 | 2854 | |
| 81 | 4V6C|1|BA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.19 | 2854 | |
| 82 | 4V7U|1|BA | Crystal structure of the E. coli ribosome bound to erythromycin. | X-RAY DIFFRACTION | 3.1 | 2854 | |
| 83 | 3J5L|1|A | Structure of the E. coli 50S subunit with ErmBL nascent chain | ELECTRON MICROSCOPY | 6.6 | 2853 | |
| 84 | 4V7V|1|BA | Crystal structure of the E. coli ribosome bound to clindamycin. | X-RAY DIFFRACTION | 3.29 | 2854 | |
| 85 | 6WYV|1|I | E. coli 50S ribosome bound to compounds 47 and VS1 | ELECTRON MICROSCOPY | 2.75 | 2876 | |
| 86 | 6PCH|1|I | E. coli 50S ribosome bound to compound 21 | ELECTRON MICROSCOPY | 2.9 | 2876 | |
| 87 | 6PC8|1|I | E. coli 50S ribosome bound to compound 40q | ELECTRON MICROSCOPY | 2.9 | 2876 | |
| 88 | 6PCT|1|I | E. coli 50S ribosome bound to compound 41q | ELECTRON MICROSCOPY | 2.8 | 2876 | |
| 89 | 6PCQ|1|I | E. coli 50S ribosome bound to VM2 | ELECTRON MICROSCOPY | 2.6 | 2876 | |
| 90 | 6PCS|1|I | E. coli 50S ribosome bound to compound 40e | ELECTRON MICROSCOPY | 2.8 | 2876 | |
| 91 | 6PC6|1|I | E. coli 50S ribosome bound to compound 47 | ELECTRON MICROSCOPY | 2.5 | 2876 | |
| 92 | 6PC5|1|I | E. coli 50S ribosome bound to compounds 46 and VS1 | ELECTRON MICROSCOPY | 2.7 | 2876 | |
| 93 | 6PCR|1|I | E. coli 50S ribosome bound to compound 40o | ELECTRON MICROSCOPY | 2.5 | 2876 | |
| 94 | 6PC7|1|I | E. coli 50S ribosome bound to compound 46 | ELECTRON MICROSCOPY | 2.5 | 2876 | |
| 95 | 6PJ6|1|I | High resolution cryo-EM structure of E.coli 50S | ELECTRON MICROSCOPY | 2.2 | 2874 | |
| 96 | 6U48|1|CA | E. coli 50S with phazolicin (PHZ) bound in exit tunnel | ELECTRON MICROSCOPY | 2.87 | 2875 | |
| 97 | 4YBB|1|CA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2876 | |
| 98 | 5JC9|1|CA | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-RAY DIFFRACTION | 3.03 | 2876 | |
| 99 | 5J5B|1|CA | Structure of the WT E coli ribosome bound to tetracycline | X-RAY DIFFRACTION | 2.8 | 2876 | |
| 100 | 5J91|1|CA | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-RAY DIFFRACTION | 2.96 | 2876 | |
| 101 | 5J7L|1|CA | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-RAY DIFFRACTION | 3 | 2875 | |
| 102 | 5J8A|1|CA | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-RAY DIFFRACTION | 3.1 | 2876 | |
| 103 | 5IT8|1|CA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 3.12 | 2876 | |
| 104 | 5J88|1|CA | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-RAY DIFFRACTION | 3.32 | 2876 | |
| 105 | 6I7V|1|CA | Ribosomal protein paralogs bL31 and bL36 | X-RAY DIFFRACTION | 2.9 | 2898 | |
| 106 | 4U24|1|DA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2897 | |
| 107 | 4U26|1|DA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2897 | |
| 108 | 4U25|1|DA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2897 | |
| 109 | 4U27|1|DA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2897 | |
| 110 | 4WF1|1|DA | Crystal structure of the E. coli ribosome bound to negamycin. | X-RAY DIFFRACTION | 3.09 | 2897 | |
| 111 | 4U1V|1|DA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2897 | |
| 112 | 4U20|1|DA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2897 | |
| 113 | 4U1U|1|DA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2897 | |
| 114 | 4V9D|1|DA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2896 | |
| 115 | 4V9C|1|BA | Allosteric control of the ribosome by small-molecule antibiotics | X-RAY DIFFRACTION | 3.3 | 2897 | |
| 116 | 4WOI|1|CA | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 2897 | |
| 117 | 4V7U|1|DA | Crystal structure of the E. coli ribosome bound to erythromycin. | X-RAY DIFFRACTION | 3.1 | 2841 | |
| 118 | 4V7V|1|DA | Crystal structure of the E. coli ribosome bound to clindamycin. | X-RAY DIFFRACTION | 3.29 | 2841 | |
| 119 | 4V7S|1|DA | Crystal structure of the E. coli ribosome bound to telithromycin. | X-RAY DIFFRACTION | 3.25 | 2841 | |
| 120 | 4WWW|1|YA | Crystal structure of the E. coli ribosome bound to CEM-101 | X-RAY DIFFRACTION | 3.1 | 2841 | |
| 121 | 4V7T|1|DA | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-RAY DIFFRACTION | 3.19 | 2841 | |
| 122 | 4V6C|1|DA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.19 | 2841 | |
| 123 | 4V6E|1|DA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.71 | 2841 | |
| 124 | 4V6D|1|DA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.81 | 2841 | |
| 125 | 6ENF|1|A | Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P | ELECTRON MICROSCOPY | 3.2 | 2807 | |
| 126 | 6ENJ|1|A | Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) | ELECTRON MICROSCOPY | 3.7 | 2871 | |
| 127 | 6ENU|1|A | Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P) | ELECTRON MICROSCOPY | 3.1 | 2871 | |
| 128 | 4V7B|1|BA | Visualization of two tRNAs trapped in transit during EF-G-mediated translocation | ELECTRON MICROSCOPY | 6.8 | 2854 | |
| 129 | 4V9C|1|DA | Allosteric control of the ribosome by small-molecule antibiotics | X-RAY DIFFRACTION | 3.3 | 2897 | |
| 130 | 4WOI|1|BA | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 2897 | |
| 131 | 4U1U|1|BA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2897 | |
| 132 | 4U20|1|BA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2897 | |
| 133 | 4U1V|1|BA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2897 | |
| 134 | 4WF1|1|BA | Crystal structure of the E. coli ribosome bound to negamycin. | X-RAY DIFFRACTION | 3.09 | 2897 | |
| 135 | 4U27|1|BA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2897 | |
| 136 | 4U25|1|BA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2897 | |
| 137 | 4U26|1|BA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2897 | |
| 138 | 4U24|1|BA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2897 | |
| 139 | 4V9D|1|CA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2897 | |
| 140 | 3JCN|1|A | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I | ELECTRON MICROSCOPY | 4.6 | 2897 | |
| 141 | 4V7C|1|BA | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure) | ELECTRON MICROSCOPY | 7.6 | 2897 | |
| 142 | 4V7D|1|AA | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure) | ELECTRON MICROSCOPY | 7.6 | 2897 | |
| 143 | 6WDG|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B) | ELECTRON MICROSCOPY | 3.3 | 2903 | |
| 144 | 6WDF|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A) | ELECTRON MICROSCOPY | 3.3 | 2903 | |
| 145 | 6WD1|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B) | ELECTRON MICROSCOPY | 3.3 | 2903 | |
| 146 | 6GXO|1|A | Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV) | ELECTRON MICROSCOPY | 3.9 | 2900 | |
| 147 | 5LZF|1|A | Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H) | ELECTRON MICROSCOPY | 4.6 | 2876 | |
| 148 | 4V6T|1|BA | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading | ELECTRON MICROSCOPY | 8.3 | 2903 | |
| 149 | 6YST|1|A | Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state | ELECTRON MICROSCOPY | 3.2 | 2880 | |
| 150 | 7JT3|1|1 | Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 151 | 6VWL|1|2 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation) | ELECTRON MICROSCOPY | 3.1 | 2833 | |
| 152 | 3JA1|1|LA | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | ELECTRON MICROSCOPY | 3.6 | 2904 | |
| 153 | 3JBV|1|b | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | ELECTRON MICROSCOPY | 3.32 | 2903 | |
| 154 | 6OGI|1|1 | 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V) | ELECTRON MICROSCOPY | 3.4 | 2903 | |
| 155 | 6OGG|1|1 | 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV). | ELECTRON MICROSCOPY | 4.2 | 2903 | |
| 156 | 6OGF|1|1 | 70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III). | ELECTRON MICROSCOPY | 3.9 | 2903 | |
| 157 | 6OG7|1|1 | 70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II) | ELECTRON MICROSCOPY | 3.3 | 2903 | |
| 158 | 6OFX|1|1 | Non-rotated ribosome (Structure I) | ELECTRON MICROSCOPY | 3.3 | 2903 | |
| 159 | 6VWM|1|2 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I) | ELECTRON MICROSCOPY | 3.4 | 2833 | |
| 160 | 6VWN|1|2 | 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II) | ELECTRON MICROSCOPY | 3.4 | 2833 | |
| 161 | 5AKA|1|B | EM structure of ribosome-SRP-FtsY complex in closed state | ELECTRON MICROSCOPY | 5.7 | 2841 | |
| 162 | 4V69|1|BB | Ternary complex-bound E.coli 70S ribosome. | ELECTRON MICROSCOPY | 6.7 | 2903 | |
| 163 | 3J9Z|1|LA | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | ELECTRON MICROSCOPY | 3.6 | 2904 | |
| 164 | 6Q98|1|1 | Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome | ELECTRON MICROSCOPY | 4.3 | 2881 | |
| 165 | 4V5B|1|AB | Structure of PDF binding helix in complex with the ribosome | X-RAY DIFFRACTION | 3.74 | 2841 | |
| 166 | 4V4Q|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-RAY DIFFRACTION | 3.46 | 2841 | |
| 167 | 6O9J|1|B | 70S Elongation Competent Ribosome | ELECTRON MICROSCOPY | 3.9 | 2841 | |
| 168 | 4V4H|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-RAY DIFFRACTION | 3.46 | 2841 | |
| 169 | 4V64|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-RAY DIFFRACTION | 3.5 | 2841 | |
| 170 | 4V53|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-RAY DIFFRACTION | 3.54 | 2841 | |
| 171 | 4V55|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4 | 2841 | |
| 172 | 4V52|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-RAY DIFFRACTION | 3.21 | 2841 | |
| 173 | 4V5Y|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4.45 | 2841 | |
| 174 | 4V57|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-RAY DIFFRACTION | 3.5 | 2841 | |
| 175 | 4V56|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-RAY DIFFRACTION | 3.93 | 2841 | |
| 176 | 4V54|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 3.3 | 2841 | |
| 177 | 4V50|1|BB | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-RAY DIFFRACTION | 3.22 | 2841 | |
| 178 | 4V9P|1|EA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
| 179 | 4V9O|1|EA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
| 180 | 4V9O|1|GA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
| 181 | 4V9P|1|GA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
| 182 | 4V9P|1|CA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
| 183 | 4V9O|1|CA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
| 184 | 3JCJ|1|A | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association | ELECTRON MICROSCOPY | 3.7 | 2854 | |
| 185 | 3J7Z|1|A | Structure of the E. coli 50S subunit with ErmCL nascent chain | ELECTRON MICROSCOPY | 3.9 | 2854 | |
| 186 | 6I0Y|1|A | TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel | ELECTRON MICROSCOPY | 3.2 | 2854 | |
| 187 | 4UY8|1|A | Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome | ELECTRON MICROSCOPY | 3.8 | 2854 | |
| 188 | 4V9O|1|AA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
| 189 | 4V9P|1|AA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
| 190 | 6LKQ|1|t | The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin | X-RAY DIFFRACTION | 3.1 | 2850 | |
| 191 | 4V85|1|BA | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome. | X-RAY DIFFRACTION | 3.2 | 2853 | |
| 192 | 4V89|1|BA | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin) | X-RAY DIFFRACTION | 3.7 | 2853 | |
| 193 | 5L3P|1|A | Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex | ELECTRON MICROSCOPY | 3.7 | 2866 | |
| 194 | 6GXN|1|A | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III) | ELECTRON MICROSCOPY | 3.9 | 2895 | |
| 195 | 6GXM|1|A | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II) | ELECTRON MICROSCOPY | 3.8 | 2896 | |
| 196 | 6GWT|1|A | Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I) | ELECTRON MICROSCOPY | 3.8 | 2896 | |
| 197 | 6GXP|1|A | Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only) | ELECTRON MICROSCOPY | 4.4 | 2896 | |
| 198 | 6YSU|1|A | Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state | ELECTRON MICROSCOPY | 3.7 | 2880 | |
| 199 | 6YSS|1|A | Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state | ELECTRON MICROSCOPY | 2.6 | 2880 | |
| 200 | 6YSR|1|A | Structure of the P+9 stalled ribosome complex | ELECTRON MICROSCOPY | 3.1 | 2880 | |
| 201 | 6OM6|1|1 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | ELECTRON MICROSCOPY | 3.1 | 2883 | |
| 202 | 6SZS|1|A | Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis | ELECTRON MICROSCOPY | 3.06 | 2903 | |
| 203 | 7K00|1|a | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 2729 | |
| 204 | 6ZTO|1|BA | E. coli 70S-RNAP expressome complex in uncoupled state 1 | ELECTRON MICROSCOPY | 3 | 2876 | |
| 205 | 6ZTP|1|BA | E. coli 70S-RNAP expressome complex in uncoupled state 6 | ELECTRON MICROSCOPY | 3 | 2876 | |
| 206 | 6ZU1|1|BA | E. coli 70S-RNAP expressome complex in uncoupled state 2 | ELECTRON MICROSCOPY | 3 | 2876 | |
| 207 | 6ZTL|1|BA | E. coli 70S-RNAP expressome complex in collided state bound to NusG | ELECTRON MICROSCOPY | 3.5 | 2875 | |
| 208 | 6ZTJ|1|BA | E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA) | ELECTRON MICROSCOPY | 3.4 | 2876 | |
| 209 | 6ZTM|1|BA | E. coli 70S-RNAP expressome complex in collided state without NusG | ELECTRON MICROSCOPY | 3.3 | 2877 | |
| 210 | 6QUL|1|A | Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid | ELECTRON MICROSCOPY | 3 | 2799 | |
| 211 | 6S0K|1|A | Ribosome nascent chain in complex with SecA | ELECTRON MICROSCOPY | 3.1 | 2883 | |
| 212 | 5GAD|1|A | RNC-SRP-SR complex early state | ELECTRON MICROSCOPY | 3.7 | 2883 | |
| 213 | 5GAF|1|A | RNC in complex with SRP | ELECTRON MICROSCOPY | 4.3 | 2883 | |
| 214 | 5GAH|1|A | RNC in complex with SRP with detached NG domain | ELECTRON MICROSCOPY | 3.8 | 2883 | |
| 215 | 5NCO|1|A | Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome | ELECTRON MICROSCOPY | 4.8 | 2883 | |
| 216 | 5GAG|1|A | RNC in complex with SRP-SR in the closed state | ELECTRON MICROSCOPY | 3.8 | 2883 | |
| 217 | 5GAE|1|A | RNC in complex with a translocating SecYEG | ELECTRON MICROSCOPY | 3.33 | 2884 | |
| 218 | 7JSW|1|1 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III) | ELECTRON MICROSCOPY | 3.8 | 2903 | |
| 219 | 7JSZ|1|1 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 220 | 7JSS|1|1 | ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 221 | 7JT2|1|1 | 70S ribosome stalled on long mRNA with ArfB bound in the A site | ELECTRON MICROSCOPY | 3.5 | 2903 | |
| 222 | 7JT1|1|1 | 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III) | ELECTRON MICROSCOPY | 3.3 | 2903 | |
| 223 | 6H58|1|AA | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome | ELECTRON MICROSCOPY | 7.9 | 2900 | |
| 224 | 6H4N|1|A | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome | ELECTRON MICROSCOPY | 3 | 2900 | |
| 225 | 6H58|1|A | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome | ELECTRON MICROSCOPY | 7.9 | 2900 | |
| 226 | 6Y69|1|A | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX | ELECTRON MICROSCOPY | 2.86 | 2887 | |
| 227 | 5U9G|1|01 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I) | ELECTRON MICROSCOPY | 3.2 | 2903 | |
| 228 | 6WNW|1|4 | Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA | ELECTRON MICROSCOPY | 3.2 | 3031 | |
| 229 | 5LZD|1|A | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA) | ELECTRON MICROSCOPY | 3.4 | 2879 | |
| 230 | 5LZA|1|A | Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC) | ELECTRON MICROSCOPY | 3.6 | 2877 | |
| 231 | 5LZE|1|A | Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C) | ELECTRON MICROSCOPY | 3.5 | 2876 | |
| 232 | 6WDB|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A) | ELECTRON MICROSCOPY | 4 | 2903 | |
| 233 | 6WDC|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B) | ELECTRON MICROSCOPY | 4.2 | 2903 | |
| 234 | 6WDI|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2) | ELECTRON MICROSCOPY | 4 | 2903 | |
| 235 | 6WDH|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1) | ELECTRON MICROSCOPY | 4.3 | 2903 | |
| 236 | 6BU8|1|01 | 70S ribosome with S1 domains 1 and 2 (Class 1) | ELECTRON MICROSCOPY | 3.5 | 2903 | |
| 237 | 6WDJ|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 238 | 6WDL|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 239 | 6WDM|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2) | ELECTRON MICROSCOPY | 3.6 | 2903 | |
| 240 | 6WDK|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2) | ELECTRON MICROSCOPY | 3.6 | 2903 | |
| 241 | 6WDD|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A) | ELECTRON MICROSCOPY | 3.2 | 2903 | |
| 242 | 6WDE|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) | ELECTRON MICROSCOPY | 3 | 2903 | |
| 243 | 6WD0|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | ELECTRON MICROSCOPY | 3 | 2903 | |
| 244 | 5UYQ|1|01 | 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc) | ELECTRON MICROSCOPY | 3.8 | 2903 | |
| 245 | 5UYM|1|01 | 70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III) | ELECTRON MICROSCOPY | 3.2 | 2903 | |
| 246 | 6WD7|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D) | ELECTRON MICROSCOPY | 3.9 | 2903 | |
| 247 | 6WD9|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 248 | 6WDA|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C) | ELECTRON MICROSCOPY | 3.8 | 2903 | |
| 249 | 6WD8|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 250 | 6WD3|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1) | ELECTRON MICROSCOPY | 3.6 | 2903 | |
| 251 | 6WD2|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A) | ELECTRON MICROSCOPY | 3.6 | 2903 | |
| 252 | 6WD4|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 253 | 6WD6|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 254 | 6WD5|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1) | ELECTRON MICROSCOPY | 3.6 | 2903 | |
| 255 | 5UYK|1|01 | 70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I) | ELECTRON MICROSCOPY | 3.9 | 2903 | |
| 256 | 5UYL|1|01 | 70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II) | ELECTRON MICROSCOPY | 3.6 | 2903 | |
| 257 | 5UYP|1|01 | 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc) | ELECTRON MICROSCOPY | 3.9 | 2903 | |
| 258 | 5UYN|1|01 | 70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc) | ELECTRON MICROSCOPY | 4 | 2903 | |
| 259 | 6DNC|1|B | E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 260 | 5U9F|1|01 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II) | ELECTRON MICROSCOPY | 3.2 | 2903 | |
| 261 | 5O2R|1|A | Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome | ELECTRON MICROSCOPY | 3.4 | 2900 | |
| 262 | 5MGP|1|A | Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs | ELECTRON MICROSCOPY | 3.1 | 2900 | |
| 263 | 5KCS|1|1A | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution | ELECTRON MICROSCOPY | 3.9 | 2876 | |
| 264 | 3J9Y|1|A | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | ELECTRON MICROSCOPY | 3.9 | 2876 | |
| 265 | 5AFI|1|A | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | ELECTRON MICROSCOPY | 2.9 | 2876 | |
| 266 | 5KPX|1|27 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV) | ELECTRON MICROSCOPY | 3.9 | 2903 | |
| 267 | 5KPS|1|28 | Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) | ELECTRON MICROSCOPY | 3.9 | 2903 | |
| 268 | 5KPV|1|27 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II) | ELECTRON MICROSCOPY | 4.1 | 2903 | |
| 269 | 5KPW|1|27 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III) | ELECTRON MICROSCOPY | 3.9 | 2903 | |
| 270 | 5IQR|1|1 | Structure of RelA bound to the 70S ribosome | ELECTRON MICROSCOPY | 3 | 2882 | |
| 271 | 5U4I|1|A | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | ELECTRON MICROSCOPY | 3.5 | 2887 | |
| 272 | 5WFS|1|A | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | ELECTRON MICROSCOPY | 3 | 2876 | |
| 273 | 5WE4|1|A | 70S ribosome-EF-Tu wt complex with GppNHp | ELECTRON MICROSCOPY | 3.1 | 2876 | |
| 274 | 5WDT|1|A | 70S ribosome-EF-Tu H84A complex with GppNHp | ELECTRON MICROSCOPY | 3 | 2876 | |
| 275 | 5WF0|1|A | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) | ELECTRON MICROSCOPY | 3.6 | 2876 | |
| 276 | 5WFK|1|A | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3) | ELECTRON MICROSCOPY | 3.4 | 2876 | |
| 277 | 5WE6|1|A | 70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA | ELECTRON MICROSCOPY | 3.4 | 2876 | |
| 278 | 5LZB|1|A | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB) | ELECTRON MICROSCOPY | 5.3 | 2879 | |
| 279 | 5LZC|1|A | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR) | ELECTRON MICROSCOPY | 4.8 | 2879 | |
| 280 | 6Q97|1|1 | Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome | ELECTRON MICROSCOPY | 3.9 | 2881 | |
| 281 | 6ZTN|1|BA | E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA) | ELECTRON MICROSCOPY | 3.9 | 2875 | |
| 282 | 7D80|1|A | Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase | ELECTRON MICROSCOPY | 4.1 | 2903 | |
| 283 | 7D6Z|1|A | Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor | ELECTRON MICROSCOPY | 3.4 | 2903 | |
| 284 | 6TC3|1|23S1 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1) | ELECTRON MICROSCOPY | 2.7 | 2874 | |
| 285 | 6TBV|1|23S1 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2) | ELECTRON MICROSCOPY | 2.7 | 2874 | |
| 286 | 5H5U|1|A | Mechanistic insights into the alternative translation termination by ArfA and RF2 | ELECTRON MICROSCOPY | 3.01 | 2902 | |
| 287 | 3JCE|1|A | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | ELECTRON MICROSCOPY | 3.2 | 2903 | |
| 288 | 3JCD|1|A | Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4) | ELECTRON MICROSCOPY | 3.7 | 2903 | |
| 289 | 6BY1|1|CA | E. coli pH03H9 complex | X-RAY DIFFRACTION | 3.94 | 2867 | |
| 290 | 5JTE|1|BA | Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA | ELECTRON MICROSCOPY | 3.6 | 2897 | |
| 291 | 5JU8|1|BA | Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA | ELECTRON MICROSCOPY | 3.6 | 2897 | |
| 292 | 5NWY|1|N | 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex | ELECTRON MICROSCOPY | 2.9 | 2898 | |
| 293 | 6OT3|1|1 | RF2 accommodated state bound Release complex 70S at 24 ms | ELECTRON MICROSCOPY | 3.9 | 2881 | |
| 294 | 6OUO|1|1 | RF2 accommodated state bound 70S complex at long incubation time | ELECTRON MICROSCOPY | 3.7 | 2881 | |
| 295 | 6OST|1|1 | RF2 pre-accommodated state bound Release complex 70S at 24ms | ELECTRON MICROSCOPY | 4.2 | 2881 | |
| 296 | 6ORL|1|1 | RF1 pre-accommodated 70S complex at 24 ms | ELECTRON MICROSCOPY | 3.5 | 2881 | |
| 297 | 6OSK|1|1 | RF1 accommodated 70S complex at 60 ms | ELECTRON MICROSCOPY | 3.6 | 2881 | |
| 298 | 6OSQ|1|1 | RF1 accommodated state bound Release complex 70S at long incubation time point | ELECTRON MICROSCOPY | 3.5 | 2881 | |
| 299 | 6ORE|1|1 | Release complex 70S | ELECTRON MICROSCOPY | 2.9 | 2881 | |
| 300 | 6VZ5|1|a | Escherichia coli transcription-translation complex D3 (TTC-D3) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 8.9 | 2880 | |
| 301 | 6VYZ|1|a | Escherichia coli transcription-translation complex C6 (TTC-C6) containing mRNA with a 21 nt long spacer, NusA, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 9.9 | 2880 | |
| 302 | 6VZ2|1|a | Escherichia coli transcription-translation complex D1 (TTC-D1) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 10 | 2880 | |
| 303 | 6VYY|1|a | Escherichia coli transcription-translation complex C5 (TTC-C5) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 9.9 | 2880 | |
| 304 | 6VZ3|1|a | Escherichia coli transcription-translation complex D2 (TTC-D2) containing mRNA with a 27 nt long spacer | ELECTRON MICROSCOPY | 8.9 | 2880 | |
| 305 | 6VYX|1|a | Escherichia coli transcription-translation complex C4 (TTC-C4) containing mRNA with a 21 nt long spacer, transcription factor NusG, and fMet-tRNAs at P-site and E-site | ELECTRON MICROSCOPY | 9.9 | 2880 | |
| 306 | 6X6T|1|a | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | ELECTRON MICROSCOPY | 3.2 | 2880 | |
| 307 | 6XII|1|a | Escherichia coli transcription-translation complex B (TTC-B) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 7 | 2880 | |
| 308 | 6XDQ|1|a | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | ELECTRON MICROSCOPY | 3.7 | 2880 | |
| 309 | 6XIJ|1|a | Escherichia coli transcription-translation complex A (TTC-A) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 8 | 2880 | |
| 310 | 6VU3|1|a | Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer | ELECTRON MICROSCOPY | 3.7 | 2880 | |
| 311 | 6VYS|1|a | Escherichia coli transcription-translation complex A1 (TTC-A1) containing a 21 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 3.7 | 2880 | |
| 312 | 6VYQ|1|a | Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 3.7 | 2880 | |
| 313 | 6XGF|1|a | Escherichia coli transcription-translation complex B (TTC-B) containing an 30 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 5 | 2880 | |
| 314 | 6VYR|1|a | Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 3.8 | 2880 | |
| 315 | 6XDR|1|a | Escherichia coli transcription-translation complex B (TTC-B) containing an 27 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 4.7 | 2880 | |
| 316 | 6VZJ|1|a | Escherichia coli transcription-translation complex A1 (TTC-A1) containing mRNA with a 15 nt long spacer, fMet-tRNAs at E-site and P-site, and lacking transcription factor NusG | ELECTRON MICROSCOPY | 4.1 | 2880 | |
| 317 | 6VYU|1|a | Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer | ELECTRON MICROSCOPY | 7 | 2880 | |
| 318 | 6VZ7|1|a | Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site | ELECTRON MICROSCOPY | 7 | 2880 | |
| 319 | 6VYW|1|a | Escherichia coli transcription-translation complex C3 (TTC-C3) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site | ELECTRON MICROSCOPY | 7 | 2880 | |
| 320 | 6VYT|1|a | Escherichia coli transcription-translation complex A2 (TTC-A2) containing a 15 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site | ELECTRON MICROSCOPY | 14 | 2880 | |
| 321 | 6X7F|1|a | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | ELECTRON MICROSCOPY | 3.5 | 2880 | |
| 322 | 6X7K|1|a | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | ELECTRON MICROSCOPY | 3.1 | 2880 | |
| 323 | 6X9Q|1|a | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 27 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site | ELECTRON MICROSCOPY | 4.8 | 2880 | |
| 324 | 5MDZ|1|1 | Structure of the 70S ribosome (empty A site) | ELECTRON MICROSCOPY | 3.1 | 2881 | |
| 325 | 5MDW|1|1 | Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state) | ELECTRON MICROSCOPY | 3.06 | 2881 | |
| 326 | 6Q9A|1|1 | Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome | ELECTRON MICROSCOPY | 3.7 | 2881 | |
| 327 | 5MDY|1|1 | Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state) | ELECTRON MICROSCOPY | 3.35 | 2881 | |
| 328 | 6C4H|1|A | Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region) | ELECTRON MICROSCOPY | 3.1 | 619 | |
| 329 | 5MDV|1|1 | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | ELECTRON MICROSCOPY | 2.97 | 2881 | |
| 330 | 6C4I|1|A | Conformation of methylated GGQ in the peptidyl transferase center during translation termination | ELECTRON MICROSCOPY | 3.24 | 2882 | |
| 331 | 5U4J|1|A | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | ELECTRON MICROSCOPY | 3.7 | 9 | |
| 332 | 3DG2|1|B | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex | ELECTRON MICROSCOPY | 10 | 2841 | |
| 333 | 3DG4|1|B | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex | ELECTRON MICROSCOPY | 12.8 | 2841 | |
| 334 | 2RDO|1|B | 50S subunit with EF-G(GDPNP) and RRF bound | ELECTRON MICROSCOPY | 9.1 | 2841 | |
| 335 | 3DG0|1|B | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex | ELECTRON MICROSCOPY | 10.8 | 2841 | |
| 336 | 4V47|1|A0 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome | ELECTRON MICROSCOPY | 12.3 | 2536 | |
| 337 | 4V48|1|A0 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome | ELECTRON MICROSCOPY | 11.5 | 2536 | |
| 338 | 5ZZM|1|N | E. coli 50S subunit bound HflX protein in presence of ATP (AMP-PNP) and GTP (GMP-PNP) analogs. | ELECTRON MICROSCOPY | 8.1 | 2903 | |
| 339 | 3DG5|1|B | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex | ELECTRON MICROSCOPY | 15.5 | 2841 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.