#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18EA4|1|7 (rep)sg_RNAsynthetic constructV-K CAST Transpososome from Scytonema hofmanni, minor configurationElectron microscopy32022-11-30
27PLA|1|BsgRNAScytonema hofmanniiCryo-EM structure of ShCas12k in complex with a sgRNA and a dsDNA targetElectron microscopy3.042021-12-01
38BD5|1|BsgRNAScytonema hofmanniiCas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complexElectron microscopy3.32022-12-28
47N3P|1|BSingle guide RNAScytonema hofmanniiCryo-EM structure of the Cas12k-sgRNA-dsDNA complexElectron microscopy3.652021-09-01
58EA3|1|7sg_RNAsynthetic constructV-K CAST Transpososome from Scytonema hofmanni, major configurationElectron microscopy3.72022-11-30
67N3O|1|BSingle guide RNAScytonema hofmanniiCryo-EM structure of the Cas12k-sgRNA complexElectron microscopy3.82021-09-01
78BD6|1|BsgRNAScytonema hofmanniiCas12k-sgRNA-dsDNA-TnsC non-productive complexElectron microscopy4.12022-12-28

Release history

Release3.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.329
Date2022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-03

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_85482.2NR_all_85482.13.263(5) 7N3O|1|B, 7N3P|1|B, 7PLA|1|B, 8EA3|1|7, 8EA4|1|7(2) 8BD5|1|B, 8BD6|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18EA4|1|7V-K CAST Transpososome from Scytonema hofmanni, minor configurationELECTRON MICROSCOPY3230
28EA3|1|7V-K CAST Transpososome from Scytonema hofmanni, major configurationELECTRON MICROSCOPY3.7230
38BD5|1|BCas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complexELECTRON MICROSCOPY3.3246
48BD6|1|BCas12k-sgRNA-dsDNA-TnsC non-productive complexELECTRON MICROSCOPY4.1233
57PLA|1|BCryo-EM structure of ShCas12k in complex with a sgRNA and a dsDNA targetELECTRON MICROSCOPY3.04217
67N3O|1|BCryo-EM structure of the Cas12k-sgRNA complexELECTRON MICROSCOPY3.8222
77N3P|1|BCryo-EM structure of the Cas12k-sgRNA-dsDNA complexELECTRON MICROSCOPY3.65229

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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