#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17ST2|1|5 (rep)Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.92022-02-23
27ST6|1|5Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy32022-02-23
37LV0|1|5Transfer RNAmRNA, tRNAProEscherichia coli K-12BacteriaRF00005Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.22021-07-28
47K54|1|5Transfer RNAmRNA, tRNAProEscherichia coli K-12BacteriaRF00005Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.22021-07-28
57K53|1|7Transfer RNAmRNA, tRNAProEscherichia coli K-12BacteriaRF00005Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.22021-07-28
67SSO|1|5Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)Electron microscopy3.22022-02-23
77SSN|1|5Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)Electron microscopy3.22022-02-23
87ST7|1|5Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)Electron microscopy3.22022-02-23
97K55|1|5Transfer RNAmRNA, tRNAProEscherichia coli K-12BacteriaRF00005Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.32021-07-28
107SSD|1|5Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Mid translocation intermediate with EF-G bound with GDP (Structure IV)Electron microscopy3.32022-02-23
117K52|1|5Transfer RNAmRNA, tRNAProEscherichia coli K-12BacteriaRF00005Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.42021-07-28
127K50|1|7Transfer RNAmRNA, tRNAProEscherichia coli K-12BacteriaRF00005Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.42021-07-28
137K51|1|5Transfer RNAmRNA, tRNAProEscherichia coli K-12BacteriaRF00005Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.52021-07-28
147SSL|1|5Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)Electron microscopy3.82022-02-23
157SSW|1|5Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Late translocation intermediate with EF-G dissociated (Structure VI)Electron microscopy3.82022-02-23
167SS9|1|5Transfer RNAmRNA, tRNA ProEscherichia coli K-12BacteriaRF00005Late translocation intermediate with EF-G partially dissociated (Structure V)Electron microscopy3.92022-02-23

Release history

Release3.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.326
Date2022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_96870.1NR_all_41750.13.219(7) 7K50|1|7, 7K51|1|5, 7K52|1|5, 7K53|1|7, 7K54|1|5, 7K55|1|5, 7LV0|1|5(9) 7SS9|1|5, 7SSD|1|5, 7SSL|1|5, 7SSN|1|5, 7SSO|1|5, 7SSW|1|5, 7ST2|1|5, 7ST6|1|5, 7ST7|1|5(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17SSO|1|5Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)ELECTRON MICROSCOPY3.277
27ST6|1|5Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY377
37K50|1|7Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.477
47K53|1|7Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.277
57K52|1|5Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.477
67K55|1|5Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.377
77ST2|1|5Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.977
87K54|1|5Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.277
97K51|1|5Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.577
107SSD|1|5Mid translocation intermediate with EF-G bound with GDP (Structure IV)ELECTRON MICROSCOPY3.377
117SS9|1|5Late translocation intermediate with EF-G partially dissociated (Structure V)ELECTRON MICROSCOPY3.977
127SSW|1|5Late translocation intermediate with EF-G dissociated (Structure VI)ELECTRON MICROSCOPY3.877
137LV0|1|5Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.277
147SSN|1|5Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)ELECTRON MICROSCOPY3.277
157ST7|1|5Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)ELECTRON MICROSCOPY3.276
167SSL|1|5Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)ELECTRON MICROSCOPY3.877

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.014 s