#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16Y50|1|2 (rep)U2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF000045'domain of human 17S U2 snRNPElectron microscopy4.12020-07-01
25MQF|1|2+ 5MQF|1|6U2 splicesomal small nuclear RNA + U6 spliceosomal RNAHomo sapiens RNA, U6 small nuclear 1 (RNU6-1), small nuclear RNA, Human gene for small nuclear RNA U2 (snRNA U2), MINX pre-mRNA (intron)Homo sapiensEukaryaRF00004 + RF00026Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex)Electron microscopy5.92017-03-22
36Y5Q|1|2U2 splicesomal small nuclear RNAU2snRNAHomo sapiensEukaryaRF00004human 17S U2 snRNPElectron microscopy7.12020-06-17
46Y53|1|2U2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF00004human 17S U2 snRNP low resolution partElectron microscopy7.12020-06-17

Release history

Release3.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.164
Date2020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-03

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_98608.2NR_all_98608.13.133(3) 5MQF|1|2+5MQF|1|6, 6Y53|1|2, 6Y5Q|1|2(1) 6Y50|1|2(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_98608.2NR_all_73426.13.165(4) 5MQF|1|2+5MQF|1|6, 6Y50|1|2, 6Y53|1|2, 6Y5Q|1|2(0) (6) 5Z56|1|H+5Z56|1|F, 5Z57|1|H+5Z57|1|F, 5Z58|1|H+5Z58|1|F, 6QX9|1|2, 7ABH|1|2, 7ABI|1|2+7ABI|1|6

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15MQF|1|2+ 5MQF|1|6Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex)ELECTRON MICROSCOPY5.9140
26Y53|1|2human 17S U2 snRNP low resolution partELECTRON MICROSCOPY7.198
36Y5Q|1|2human 17S U2 snRNPELECTRON MICROSCOPY7.1148
46Y50|1|25'domain of human 17S U2 snRNPELECTRON MICROSCOPY4.150

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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