PDBID | FR3D analysis | Chain(s) | NTs | Pairs | Res | Date | Organism | Description provided by author | Author | Also represents |
1S72 | 1S72 | 09 | 2871 | 1376 | 2.4 | 6-15-04 | HALOARCULA MARISMORTUI,HALOARCULA MARISMORTUI | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | D.J.KLEIN,T.M.SCHMEING,P.B.MOORE,T.A.STEITZ | 1VQ6 1VQ4 3CC2 3CPW 1VQO 1VQ8 1K73 1VQP 1M90 1VQK 1JJ2 1VQ9 3CC4 3CCU 1VQM 1VQL 3G6E 3CCM 1YHQ 1NJI 1QVF 1YI2 1VQ7 1KQS 1VQN 3CXC 3CCQ 3CC7 3CCV 1KC8 1VQ5 3CCL 1Q86 1K9M 1YIJ 3CMA 1FFK 1YIT 1YJW 1Q82 1N8R 3CCE 3G71 1YJN 1M1K 2OTL 1Q81 1QVG 1K8A 2OTJ 1Q7Y 3CD6 1KD1 1YJ9 3I56 3I55 2QEX 3CCS 3CME 3CCR 1W2B 3CCJ 2QA4 3G4S 1FG0 1FFZ Compare |
2VQE | 2VQE | AXY | 1522 | 681 | 2.5 | 4-29-08 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING | S.KURATA,A.WEIXLBAUMER,T.OHTSUKI,T.SHIMAZAKI,T.WADA, Y.KIRINO,K.TAKAI,K.WATANABE,V.RAMAKRISHNAN,T.SUZUKI | 1FJG 1J5E 2UUA 1IBL 1N32 1HR0 2UUC 2UU9 2UUB 1HNX 1HNW 2VQF 2UXC 1IBK 1HNZ 1IBM 1XNR 1XMQ 1XNQ 2E5L 2ZM6 3PYN 3PYQ 2HHH 3F1E 3D5A 2UXD 1XMO 3F1G 3D5C 1N33 3MR8 3I8H 3MS0 2Y10 2UXB 1I96 3I8G 2Y18 2Y0W 2Y0U 3HUY 2Y0Y 2WRK 2XSY 3KNN 2XQD 1I94 3I9D 3KNL 2XUY 3I9B 2WRI 2Y14 2J02 2J00 2Y16 3KIQ 3OGE 3KIS 3FIC 2WDM 2WDH 3OGY 2WDG 2WDK 2X9T 3OHC 3OHD 3OI0 3PYU 2X9R 3OHY 3PYS 1I95 3HUW 2F4V 3KIX 3KIU 2WH3 2Y12 2WH1 3OI2 3OI4 3OTO 2XFZ 2QNH 3KNH 3KNJ 2V46 2B9O 2B64 2B9M 2V48 2XG1 2OW8 2HGI 1N34 2WRQ 2HGR 2WRN 1N36 2HGP 1YL4 1I97 1FKA Compare |
3DIL | 3DIL | A | 173 | 81 | 1.9 | 9-16-08 | synthetic | CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO LYSINE | A.A.SERGANOV | 3DIR 3DJ2 3DIQ 3DIX 3DIG 3DJ0 3DIS 3DIM 3DIY 3DIZ 3DIO Compare |
3PDR | 3PDR | A | 322 | 148 | 1.9 | 2-23-11 | BACILLUS SUBTILIS | CRYSTAL STRUCTURE OF MANGANESE BOUND M-BOX RNA | A RAMESH,W.C.WINKLER | 2QBZ Compare |
1GID | 1GID | AB | 316 | 153 | 2.5 | 12-31-96 | SYNTHETIC CONSTRUCT | CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING | J.H.CATE,A.R.GOODING,E.PODELL,K.ZHOU,B.L.GOLDEN,C.E.KUNDROT, T.R.CECH,J.A.DOUDNA | 1HR2 2R8S 1L8V Compare |
2NZ4 | 2NZ4 | GHRS | 594 | 238 | 2.5 | 1-16-07 | synthetic,synthetic | STRUCTURAL INVESTIGATION OF THE GLMS RIBOZYME BOUND TO ITS CATALYTIC COFACTOR | J.C.COCHRANE | 3G96 3L3C 3G8T 3G9C 3G8S Compare |
2Z75 | 2Z75 | AB | 140 | 62 | 1.7 | 9-04-07 | synthetic | T. TENGCONGENSIS GLMS RIBOZYME BOUND TO GLUCOSAMINE-6- PHOSPHATE | D.J.KLEIN,S.R.WILKINSON,M.D.BEEN,A.R.FERRE-D'AMARE | 2HO7 2H0X 2GCS 3B4B 2GCV 2Z74 2H0W 2H0S 3B4A 2HO6 2H0Z 3B4C Compare |
1LNG | 1LNG | B | 97 | 44 | 2.3 | 6-07-02 | METHANOCALDOCOCCUS JANNASCHII | CRYSTAL STRUCTURE OF THE SRP19-7S.S SRP RNA COMPLEX OF M. JANNASCHII | T.HAINZL,S.HUANG,A.E.SAUER-ERIKSSON | 2V3C 3NDB 1Z43 Compare |
3GX5 | 3GX5 | A | 94 | 43 | 2.4 | 1-12-10 | synthetic | CRYSTAL STRUCTURE OF T. TENCONGENSIS SAM-I RIBOSWITCH VARIANT A94G/U34 BOUND WITH SAM | R.K.MONTANGE,R.T.BATEY | 2GIS 3GX6 3IQR 3GX2 3IQN 3GX3 3IQP 3GX7 Compare |
1M5O | 1M5O | DE | 224 | 94 | 2.2 | 10-12-02 | synthetic,synthetic | TRANSITION STATE STABILIZATION BY A CATALYTIC RNA | P.B.RUPERT,A.P.MASSEY,S.T.SIGURDSSON,A.R.FERRE-D'AMARE | 1M5V 1M5K 1M5P Compare |
3MXH | 3MXH | R | 91 | 37 | 2.3 | 8-25-10 | synthetic | NATIVE STRUCTURE OF A C-DI-GMP RIBOSWITCH FROM V. CHOLERAE | S.A.STROBEL,K.D.SMITH | 3MUR 3MUV 3MUM 3IRW 3MUT Compare |
3ADD | 3ADD | C | 176 | 73 | 2.4 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 3) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | 3ADB Compare |
3RG5 | 3RG5 | A | 172 | 71 | 2.0 | 6-08-11 | MUS MUSCULUS | CRYSTAL STRUCTURE OF MOUSE TRNA(SEC) | M.C.WAHL,O.M.GANICHKIN,E.A.ANEDCHENKO | 3A3A 3HL2 Compare |
3AM1 | 3AM1 | B | 81 | 34 | 2.4 | 12-29-10 | synthetic | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH ANTICODON-STEM/LOOP TRUNCATED TRNA(SEC) | Y.ARAISO,R.ISHITANI,O.NUREKI | |
2GDI | 2GDI | XY | 156 | 74 | 2.0 | 7-04-06 | synthetic | CRYSTAL STRUCTURE OF THIAMINE PYROPHOSPHATE-SPECIFIC RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE | A.SERGANOV | |
3D2V | 3D2V | A | 154 | 71 | 2.0 | 7-01-08 | ARABIDOPSIS THALIANA | STRUCTURE OF THE EUKARYOTIC TPP-SPECIFIC RIBOSWITCH BOUND TO THE ANTIBACTERIAL COMPOUND PYRITHIAMINE PYROPHOSPHATE | S.THORE,C.FRICK,N.BAN | 3D2X 3D2G 2CKY Compare |
2CV1 | 2CV1 | D | 150 | 65 | 2.4 | 9-05-06 | synthetic | GLUTAMYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH TRNA(GLU), ATP, AND AN ANALOG OF L-GLUTAMATE: A QUATERNARY COMPLEX | S.SEKINE,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2DXI 1G59 1N77 1N78 2CV2 2CV0 Compare |
2ZUE | 2ZUE | B | 75 | 29 | 2.0 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII ARGINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(ARG) AND AN ATP ANALOG (ANP) | M.KONNO,T.SUMIDA,E.UCHIKAWA,Y.MORI,T.YANAGISAWA,S.SEKINE, S.YOKOYAMA | 2ZUF Compare |
1QU2 | 1QU2 | T | 75 | 31 | 2.2 | 8-31-99 | STAPHYLOCOCCUS AUREUS | INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN | L.F.SILVIAN,J.WANG,T.A.STEITZ | 1FFY 1QU3 Compare |
1VC7 | 1VC7 | B | 74 | 30 | 2.5 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE HEPATITIS DELTA VIRUS GEMONIC RIBOZYME PRECURSOR, WITH C75U MUTAION, IN SR2+ SOLUTION | A.KE,K.ZHOU,F.DING,J.H.D.CATE,J.A.DOUDNA | 1VBY 1VC5 1SJ4 1SJ3 1VBX 1VC0 2OIH 1VBZ 1SJF 1VC6 1DRZ 1CX0 2OJ3 Compare |
1J1U | 1J1U | B | 74 | 31 | 1.9 | 6-03-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEAL TYROSYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(TYR) AND L-TYROSINE | T.KOBAYASHI,O.NUREKI,R.ISHITANI,M.TUKALO,S.CUSACK, K.SAKAMOTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3FOZ | 3FOZ | C | 143 | 58 | 2.5 | 1-20-09 | synthetic,synthetic | STRUCTURE OF E. COLI ISOPENTENYL-TRNA TRANSFERASE IN COMPLEX WITH E. COLI TRNA(PHE) | E.SEIF,B.M.HALLBERG | 2ZM5 2ZXU Compare |
1QTQ | 1QTQ | B | 74 | 30 | 2.2 | 5-27-98 | ESCHERICHIA COLI | GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA AND AN AMINO ACID ANALOG | V.L.RATH,L.F.SILVIAN,B.BEIJER,B.S.SPROAT,T.A.STEITZ | 1O0C 1QRS 1QRT 1GTR 1GTS 1QRU 1O0B 1EUY 1EXD 2RE8 1ZJW 2RD2 1EUQ Compare |
1U0B | 1U0B | A | 74 | 30 | 2.3 | 11-23-04 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF CYSTEINYL-TRNA SYNTHETASE BINARY COMPLEX WITH TRNACYS | S.HAUENSTEIN,C.M.ZHANG,Y.M.HOU,J.J.PERONA | |
2HOJ | 2HOJ | A | 74 | 33 | 2.5 | 9-19-06 | synthetic | CRYSTAL STRUCTURE OF AN E. COLI THI-BOX RIBOSWITCH BOUND TO THIAMINE PYROPHOSPHATE, MANGANESE IONS | T.E.EDWARDS,A.R.FERRE-D'AMARE | 2HOO 2HOL 2HOK 3K0J 2HOM 2HOP Compare |
1Y26 | 1Y26 | X | 71 | 35 | 2.1 | 12-28-04 | VIBRIO VULNIFICUS | A-RIBOSWITCH-ADENINE COMPLEX | A.SERGANOV,Y.R.YUAN,D.J.PATEL | |
3LA5 | 3LA5 | A | 71 | 35 | 1.7 | 1-26-10 | BACILLUS SUBTILIS | X-RAY CRYSTAL STRUCTURE OF MC6 RNA RIBOSWITCH BOUND TO AZACYTOSINE | M.S.DUNSTAN,D.LEYS | |
1C0A | 1C0A | B | 68 | 25 | 2.4 | 11-23-99 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE : TRNAASP : ASPARTYL-ADENYLATE COMPLEX | S.EILER,A.-C.DOCK-BREGEON,L.MOULINIER,J.-C.THIERRY,D.MORAS | 1EFW Compare |
2QUW | 2QUW | AB | 67 | 25 | 2.2 | 7-15-08 | synthetic,synthetic | HAMMERHEAD RIBOZYME G12A MUTANT AFTER CLEAVAGE | Y.I.CHI,W.G.SCOTT,S.H.KIM | 2QUS Compare |
3FO4 | 3FO4 | A | 63 | 32 | 1.9 | 6-23-09 | synthetic | CRYSTAL STRUCTURE OF GUANINE RIBOSWITCH C74U MUTANT BOUND TO 6-CHLOROGUANINE | S.D.GILBERT,R.T.BATEY | 2XNZ 3GOG 3FO6 2EET 3GAO 2G9C 1U8D 2EEV 3GER 2EES 2EEW 1Y27 3DS7 3GES 2EEU 3G4M 3GOT 2B57 Compare |
3NKB | 3NKB | AB | 70 | 31 | 1.9 | 9-01-10 | HOMO SAPIENS | A 1.9A CRYSTAL STRUCTURE OF THE HDV RIBOZYME PRECLEAVAGE SUGGESTS BOTH LEWIS ACID AND GENERAL ACID MECHANISMS CONTRIBUTE TO PHOSPHODIESTER CLEAVAGE | J.-H.CHEN,R.YAJIMA,D.M.CHADALAVADA,E.CHASE,P.C.BEVILACQUA,B.L.GOLDEN | |
3EGZ | 3EGZ | B | 64 | 20 | 2.2 | 10-28-08 | synthetic | CRYSTAL STRUCTURE OF AN IN VITRO EVOLVED TETRACYCLINE APTAMER AND ARTIFICIAL RIBOSWITCH | H.XIAO,T.E.EDWARDS,A.R.FERRE-D'AMARE | |
1F7U | 1F7U | B | 63 | 22 | 2.2 | 6-27-01 | synthetic | CRYSTAL STRUCTURE OF THE ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNA(ARG) AND L-ARG | B.DELAGOUTTE,D.MORAS,J.CAVARELLI | 1F7V Compare |
1EHZ | 1EHZ | A | 62 | 23 | 1.9 | 10-02-00 | synthetic | THE CRYSTAL STRUCTURE OF YEAST PHENYLALANINE TRNA AT 1.93 A RESOLUTION | H.SHI,P.B.MOORE | 1I9V 1ZO3 1ZO1 1FCW 6TNA 1TRA 4TRA 1MJ1 1TN1 1TN2 1EVV 1OB5 1SZ1 1ML5 1OB2 1TTT 4TNA Compare |
3HJW | 3HJW | DE | 70 | 30 | 2.4 | 6-23-09 | synthetic,synthetic | STRUCTURE OF A FUNCTIONAL RIBONUCLEOPROTEIN PSEUDOURIDINE SYNTHASE BOUND TO A SUBSTRATE RNA | B.LIANG,J.ZHOU,E.KAHEN,R.M.TERNS,M.P.TERNS,H.LI | 3LWQ 3LWP 3LWV 3LWR 3LWO Compare |
3HAX | 3HAX | EF | 71 | 31 | 2.1 | 6-23-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND GAR1-MINUS H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
2HVY | 2HVY | E | 57 | 20 | 2.3 | 9-12-06 | synthetic | CRYSTAL STRUCTURE OF AN H/ACA BOX RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
2DLC | 2DLC | Y | 57 | 20 | 2.4 | 6-12-07 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF YEAST TYROSYL- TRNA SYNTHETASE | M.TSUNODA,Y.KUSAKABE,N.TANAKA,K.T.NAKAMURA | |
1GTF | 1GTF | W | 44 | 0 | 1.8 | 4-05-02 | synthetic | THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A 53-NUCLEOTIDE RNA MOLECULE CONTAINING GAGUU REPEATS | N.H.HOPCROFT,A.L.WENDT,P.GOLLNICK,A.A.ANTSON | 1C9S Compare |
3E5C | 3E5C | A | 52 | 21 | 2.2 | 10-07-08 | synthetic | CRYSTAL STRUCTURE OF THE SMK BOX (SAM-III) RIBOSWITCH WITH SAM | C.LU | 3E5F 3E5E Compare |
3NPQ | 3NPQ | ABC | 150 | 53 | 2.2 | 10-06-10 | RALSTONIA SOLANACEARUM | STRUCTURE OF THE S-ADENOSYLHOMOCYSTEINE RIBOSWITCH AT 2.18 A | F.E.REYES,A.E.EDWARDS,R.T.BATEY | 3NPN Compare |
2PXV | 2PXV | B | 49 | 22 | 2.0 | 8-07-07 | synthetic | VARIANT 6 OF RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE | A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT | 2PXK 2PXD 2PXQ 2PXB 2PXT 2PXP 2PXE 1DUL 3LQX 1HQ1 2PXU 2PXF 2PXL 2XKV Compare |
2VPL | 2VPL | B | 94 | 38 | 2.3 | 9-23-08 | METHANOCALDOCOCCUS JANNASCHII | THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII | V.KLJASHTORNY,S.TISHCHENKO,N.NEVSKAYA,S.NIKONOV,M.GARBER | |
1GTN | 1GTN | W | 44 | 0 | 2.5 | 4-05-02 | synthetic | STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO AN RNA MOLECULE CONTAINING 11 GAGCC REPEATS | N.H.HOPCROFT,A.L.WENDT,P.GOLLNICK,A.A.ANTSON | |
2OEU | 2OEU | AB | 59 | 24 | 2.0 | 2-20-07 | synthetic,synthetic | FULL-LENGTH HAMMERHEAD RIBOZYME WITH MN(II) BOUND | M.MARTICK,W.G.SCOTT | 2GOZ Compare |
3BNT | 3BNT | A | 42 | 18 | 2.3 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF [CO(NH3)6]CL3 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | |
3P22 | 3P22 | EFGH | 190 | 104 | 2.5 | 12-08-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE ENE, A VIRAL RNA STABILITY ELEMENT, IN COMPLEX WITH A9 RNA | R.M.MITTON-FRY,S.J.DEGREGORIO,J.WANG,T.A.STEITZ,J.A.STEITZ | |
2ZY6 | 2ZY6 | A | 38 | 12 | 1.8 | 6-30-09 | synthetic | CRYSTAL STRUCTURE OF A TRUNCATED TRNA, TPHE39A | I.TANAKA,M.YAO,Y.TANAKA,Y.KITAGO,S.YMAGATA | |
2HW8 | 2HW8 | B | 36 | 17 | 2.1 | 12-19-06 | synthetic | STRUCTURE OF RIBOSOMAL PROTEIN L1-MRNA COMPLEX AT 2.1 RESOLUTION. | S.TISHCHENKO,E.NIKONOVA,A.NIKULIN,N.NEVSKAYA,S.VOLCHKOV, W.PIENDL,M.GARBER,S.NIKONOV | 1ZHO Compare |
1KFO | 1KFO | A | 36 | 16 | 1.6 | 12-07-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA HELIX RECOGNIZED BY A ZINC- FINGER PROTEIN: AN 18 BASE PAIR DUPLEX AT 1.6 RESOLUTION | S.LIMA,J.HILDENBRAND,A.KOROSTELEV,S.HATTMAN,H.LI | |
3OVA | 3OVA | C | 34 | 13 | 2.0 | 12-01-10 | synthetic | HOW THE CCA-ADDING ENZYME SELECTS ADENINE OVER CYTOSINE IN POSITION 76 OF TRNA | B.C.PAN,Y.XIONG,T.A.STEITZ | 3OVS 3OVB 3OV7 Compare |
1ET4 | 1ET4 | AB | 175 | 75 | 2.3 | 11-13-00 | synthetic | CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A | D.SUSSMAN,C.WILSON | 1DDY Compare |
2DR8 | 2DR8 | B | 33 | 13 | 2.5 | 11-14-06 | synthetic | COMPLEX STRUCTURE OF CCA-ADDING ENZYME WITH TRNAMINIDC AND CTP | K.TOMITA,R.ISHITANI,S.FUKAI,O.NUREKI | 2ZH1 2ZH7 2DR7 2ZHA 2ZH9 2ZH3 2ZH2 2ZH6 2ZH5 2DVI 2DR9 2ZH4 2ZHB 2ZH8 2DRA 2DRB 2DR5 Compare |
3R9W | 3R9W | B | 34 | 0 | 2.0 | 6-22-11 | synthetic | CRYSTAL STRUCTURE OF ERA IN COMPLEX WITH MGGDPNP AND NUCLEOTIDES 1506- 1542 OF 16S RIBOSOMAL RNA | C.TU,X.JI | |
1MJI | 1MJI | C | 68 | 28 | 2.5 | 1-21-03 | ESCHERICHIA COLI | DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX | A.PEREDERINA,N.NEVSKAYA,O.NIKONOV,A.NIKULIN,P.DUMAS,M.YAO, I.TANAKA,M.GARBER,G.GONGADZE,S.NIKONOV | |
1Z7F | 1Z7F | A | 32 | 16 | 2.1 | 10-18-05 | synthetic | CRYSTAL STRUCTURE OF 16 BASE PAIR RNA DUPLEX CONTAINING A C- A MISMATCH | C.M.GHERGHE,J.M.KRAHN,K.M.WEEKS | |
3CZW | 3CZW | X | 28 | 14 | 1.4 | 9-09-08 | synthetic | X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX | W.RYPNIEWSKI,D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK | 3D0M Compare |
1JBR | 1JBR | CF | 61 | 26 | 2.1 | 10-26-01 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOTOXIN RESTRICTOCIN AND A 31- MER SRD RNA INHIBITOR | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | 1JBT Compare |
2BH2 | 2BH2 | C | 58 | 10 | 2.1 | 3-30-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE RUMA IN COMPLEX WITH RIBOSOMAL RNA SUBSTRATE AND S-ADENOSYLHOMOCYSTEINE. | T.T.LEE,S.AGARWALLA,R.M.STROUD | |
3B5S | 3B5S | ABC | 59 | 28 | 2.2 | 8-12-08 | synthetic,synthetic,synthetic | MINIMALLY HINGED HAIRPIN RIBOZYME INCORPORATES A38DAP MUTATION AND 2'-O-METHYL MODIFICATION AT THE ACTIVE SITE | C.MACELREVEY,J.KRUCINSKA,J.E.WEDEKIND | 3B91 3B5F 3BBK 3BBI 3I2R 3B5A 3CR1 3BBM 3B58 3I2S 3I2Q 3I2U 3CQS Compare |
3B31 | 3B31 | AB | 43 | 16 | 2.4 | 12-25-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF DOMAIN III OF THE CRICKET PARALYSIS VIRUS IRES RNA | J.S.KIEFT,D.A.COSTANTINO,J.S.PFINGSTEN,R.P.RAMBO | 3MJA 3MJ3 3MJB Compare |
3K1V | 3K1V | A | 29 | 13 | 2.2 | 10-06-09 | synthetic | COCRYSTAL STRUCTURE OF A MUTANT CLASS-I PREQ1 RIBOSWITCH | D.J.KLEIN,T.E.EDWARDS,A.R.FERRE-D'AMARE | 3FU2 2L1V Compare |
1OOA | 1OOA | D | 58 | 18 | 2.5 | 7-22-03 | synthetic | CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH- AFFINITY RNA APTAMER | D.B.HUANG,D.VU,L.A.CASSIDAY,J.M.ZIMMERMAN,L.J.MAHER III, G.GHOSH | |
1Q96 | 1Q96 | AC | 81 | 37 | 1.8 | 11-25-03 | synthetic | CRYSTAL STRUCTURE OF A MUTANT OF THE SARCIN/RICIN DOMAIN FROM RAT 28S RRNA | C.C.CORRELL,J.BENEKEN,M.J.PLANTINGA,M.LUBBERS,Y.L.CHAN | 1Q93 430D Compare |
2EZ6 | 2EZ6 | CD | 56 | 26 | 2.0 | 2-07-06 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS RNASE III (D44N) COMPLEXED WITH PRODUCT OF DOUBLE-STRANDED RNA PROCESSING | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | 2NUF Compare |
1D4R | 1D4R | AB | 54 | 22 | 2.0 | 12-02-99 | synthetic,synthetic | -MER FRAGMENT OF HUMAN SRP RNA HELIX 6 | K.WILD,O.WEICHENRIEDER,G.A.LEONARD,S.CUSACK | |
3DVZ | 3DVZ | A | 27 | 10 | 1.0 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA | V.OLIERIC,U.RIEDER,K.LANG,A.SERGANOV,C.SCHULZE-BRIESE,R.MICURA, P.DUMAS,E.ENNIFAR | 483D 1Q9A 480D 1MSY 3DW6 3DW4 3DW7 3DW5 Compare |
1L2X | 1L2X | A | 27 | 14 | 1.2 | 3-22-02 | synthetic | ATOMIC RESOLUTION CRYSTAL STRUCTURE OF A VIRAL RNA PSEUDOKNOT | M.EGLI,G.MINASOV,L.SU,A.RICH | 437D 1L3D Compare |
1JID | 1JID | B | 26 | 10 | 1.8 | 10-19-01 | synthetic | HUMAN SRP19 IN COMPLEX WITH HELIX 6 OF HUMAN SRP RNA | K.WILD,I.SINNING,S.CUSACK | 1L1W Compare |
413D | 413D | A | 26 | 12 | 1.8 | 7-10-98 | synthetic | A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC) | Y.TANAKA,S.FUJII,H.HIROAKI,T.SAKATA,T.TANAKA,S.UESUGI,K.- I.TOMITA,Y.KYOGOKU | |
3O7V | 3O7V | A | 26 | 12 | 2.1 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF HUMAN HIWI1 (V361M) PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OCH3 AT ITS 3'-END | Y.TIAN,D.K.SIMANSHU,J.-B.MA,D.J.PATEL | 3O6E 3O3I Compare |
2A43 | 2A43 | A | 26 | 13 | 1.3 | 9-27-05 | synthetic | CRYSTAL STRUCTURE OF A LUTEOVIRAL RNA PSEUDOKNOT AND MODEL FOR A MINIMAL RIBOSOMAL FRAMESHIFTING MOTIF | P.S.PALLAN,W.S.MARSHALL,J.HARP,F.C.JEWETT III,Z.WAWRZAK, B.A.BROWN II,A.RICH,M.EGLI | |
2QUX | 2QUX | F | 150 | 54 | 2.4 | 12-18-07 | PSEUDOMONAS PHAGE PP7 | PP7 COAT PROTEIN DIMER IN COMPLEX WITH RNA HAIRPIN | J.A.CHAO | |
283D | 283D | A | 24 | 12 | 2.3 | 9-30-96 | engineered | A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING | K.J.BAEYENS,H.L.DE BONDT,A.PARDI,S.R.HOLBROOK | |
1ZBL | 1ZBL | C | 24 | 0 | 2.2 | 7-12-05 | synthetic | BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D192N IN COMPLEX WITH 12-MER RNA/DNA HYBRID | M.NOWOTNY,S.A.GAIDAMAKOV,R.J.CROUCH,W.YANG | |
2Q1R | 2Q1R | A | 24 | 12 | 1.1 | 10-30-07 | engineered | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH. | F.LI,P.S.PALLAN | |
1A9N | 1A9N | Q | 48 | 12 | 2.4 | 9-23-98 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL U2B''-U2A' PROTEIN COMPLEX BOUND TO A FRAGMENT OF U2 SMALL NUCLEAR RNA | S.R.PRICE,P.R.EVANS,K.NAGAI | |
255D | 255D | A | 24 | 12 | 2.0 | 2-07-95 | synthetic | CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS | S.R.HOLBROOK,C.CHEONG,I.TINOCO JR,S.-H.KIM | |
2ANN | 2ANN | B | 23 | 6 | 2.3 | 10-24-06 | synthetic | CRYSTAL STRUCTURE (I) OF NOVA-1 KH1/KH2 DOMAIN TANDEM WITH 25 NT RNA HAIRPIN | L.MALININA,M.TEPLOVA,K.MUSUNURU,A.TEPLOV,J.C.DARNELL, S.K.BURLEY,R.B.DARNELL,D.J.PATEL | 2ANR Compare |
2PN4 | 2PN4 | AB | 84 | 32 | 2.3 | 4-01-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF HEPATITIS C VIRUS IRES SUBDOMAIN IIA | Q.ZHAO,Q.HAN,C.R.KISSINGER,P.A.THOMPSON | 2PN3 Compare |
2QEK | 2QEK | AB | 46 | 20 | 1.8 | 5-06-08 | synthetic | HIV-1 SUBTYPE F DIS RNA EXTENDED DUPLEX FORM | S.FREISZ,E.ENNIFAR,P.DUMAS | |
1NLC | 1NLC | AB | 46 | 22 | 1.9 | 5-13-03 | synthetic | HIV-1 DIS(MAL) DUPLEX ZN-SOAKED | E.ENNIFAR,P.WALTER,P.DUMAS | 1WVD 1Y6T 1Y6S 462D 1O3Z 1Y73 1Y99 1Y95 1Y90 2OIJ 2OJ0 2OIY 3C44 3FAR 3DVV Compare |
1XPE | 1XPE | AB | 46 | 20 | 1.9 | 10-18-05 | synthetic | HIV-1 SUBTYPE B GENOMIC RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.DUMAS | 1XP7 2B8R 2B8S 1XPF 2FD0 2FCY 1ZCI 1Y3S 1Y3O 1YXP 2FCX 2FCZ 1K9W Compare |
2PJP | 2PJP | B | 23 | 10 | 2.3 | 10-30-07 | ESCHERICHIA COLI | STRUCTURE OF THE MRNA-BINDING DOMAIN OF ELONGATION FACTOR SELB FROM E.COLI IN COMPLEX WITH SECIS RNA | N.SOLER,D.FOURMY,S.YOSHIZAWA | |
2UWM | 2UWM | D | 46 | 19 | 2.3 | 5-08-07 | MOORELLA THERMOACETICA | C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA | T.OSE,N.SOLER,L.RASUBALA,K.KUROKI,D.KOHDA,D.FOURMY, S.YOSHIZAWA,K.MAENAKA | 2PLY 1WSU Compare |
2FQN | 2FQN | AB | 43 | 18 | 2.3 | 2-14-06 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING A SITE | J.KONDO,A.URZHUMTSEV,E.WESTHOF | 2O3W 2G5K Compare |
3BNQ | 3BNQ | AB | 86 | 32 | 2.0 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF SRCL2 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | 3BNS 3BNR Compare |
3MEI | 3MEI | AB | 44 | 19 | 2.0 | 1-26-11 | synthetic | REGULATORY MOTIF FROM THE THYMIDYLATE SYNTHASE MRNA | S.DIBROV,J.MCLEAN,T.HERMANN | |
3LOA | 3LOA | AB | 42 | 15 | 2.3 | 8-04-10 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA CONSTRUCT WITH TWO ADJACENT LIGAND BINDING SITES OF HELIX H44 IN 16S RIBOSOMAL RNA | S.DIBROV | |
1FEU | 1FEU | BC | 80 | 32 | 2.3 | 6-25-01 | synthetic,synthetic | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. | R.V.FEDOROV,V.A.MESHCHERYAKOV,G.M.GONGADZE,N.P.FOMENKOVA, N.A.NEVSKAYA,M.SELMER,M.LAURBERG,O.KRISTENSEN,S.AL- KARADAGHI,A.LILJAS,M.B.GARBER,S.V.NIKONOV | |
1URN | 1URN | Q | 55 | 13 | 1.9 | 3-08-96 | synthetic | U1A MUTANT/RNA COMPLEX + GLYCEROL | C.OUBRIDGE,N.ITO,P.R.EVANS,C.-H.TEO,K.NAGAI | |
1O9M | 1O9M | AB | 42 | 17 | 2.4 | 3-27-03 | ESCHERICHIA COLI | THE COMPLEX OF A NOVEL ANTIBIOTIC WITH THE AMINOACYL SITE OF THE BACTERIAL RIBOSOME REVEALED BY X-RAY CRYSTALLOGRAPHY. | R.RUSSELL,J.B.MURRAY | 2F4U 2ET8 Compare |
2ZKO | 2ZKO | CD | 42 | 18 | 1.7 | 10-14-08 | INFLUENZA A VIRUS | STRUCTURAL BASIS FOR DSRNA RECOGNITION BY NS1 PROTEIN OF HUMAN INFLUENZA VIRUS A | Y.A.YUAN | |
1MWL | 1MWL | AB | 42 | 18 | 2.4 | 2-18-03 | synthetic | CRYSTAL STRUCTURE OF GENETICIN BOUND TO THE EUBACTERIAL 16S RRNA A SITE | Q.VICENS,E.WESTHOF | 2BEE 2BE0 2PWT 1YRJ 2F4T 2ET4 2ET5 1LC4 2ET3 2ESJ 2G5Q 1J7T 2ESI Compare |
1RPU | 1RPU | CD | 42 | 19 | 2.5 | 1-13-04 | synthetic | CRYSTAL STRUCTURE OF CIRV P19 BOUND TO SIRNA | J.M.VARGASON,G.SZITTYA,J.BURGYAN,T.M.T.HALL | |
3BOY | 3BOY | D | 21 | 0 | 1.7 | 1-15-08 | BACILLUS SUBTILIS | CRYSTAL STRUCTURE OF THE HUTP ANTITERMINATION COMPLEX BOUND TO THE HUT MRNA | T.S.KUMAREVEL,D.BALASUNDARESAN,J.JEYAKANTHAN,A.SHINKAI, S.YOKOYAMA,P.K.R.KUMAR,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3BNO | 3BNO | CD | 80 | 27 | 2.4 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE (BR-DERIVATIVE) | J.KONDO,E.WESTHOF | 3BNP 3BNN Compare |
1K8W | 1K8W | B | 21 | 8 | 1.9 | 12-31-01 | synthetic | CRYSTAL STRUCTURE OF THE E. COLI PSEUDOURIDINE SYNTHASE TRUB BOUND TO A T STEM-LOOP RNA | C.HOANG,A.R.FERRE-D'AMARE | 1ZL3 1ZE2 2AB4 Compare |
1EC6 | 1EC6 | C | 40 | 9 | 2.4 | 2-21-00 | synthetic | CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN BOUND TO 20-MER RNA HAIRPIN | H.A.LEWIS,K.MUSUNURU,K.B.JENSEN,C.EDO,H.CHEN | |
2I82 | 2I82 | E | 79 | 28 | 2.0 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF PSEUDOURIDINE SYNTHASE RLUA: INDIRECT SEQUENCE READOUT THROUGH PROTEIN-INDUCED RNA STRUCTURE | C.HOANG | |
3NJ6 | 3NJ6 | A | 20 | 8 | 0.9 | 8-25-10 | synthetic | .95 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
2Y8W | 2Y8W | B | 19 | 6 | 1.8 | 5-18-11 | synthetic | STRUCTURE OF CRISPR ENDORIBONUCLEASE CSE3 BOUND TO 20 NT RNA | D.G.SASHITAL,M.JINEK,J.A.DOUDNA | |
2P7E | 2P7E | ABCDP | 60 | 28 | 2.0 | 5-22-07 | synthetic,synthetic,synthetic,synthetic | VANADATE AT THE ACTIVE SITE OF A SMALL RIBOZYME SUGGESTS A ROLE FOR WATER IN TRANSITION-STATE STABILIZATION | A.T.TORELLI,J.KRUCINSKA,J.E.WEDEKIND | 2OUE 2NPY 2BCY 2D2K 1X9C 1ZFX 1ZFV 3GS8 2P7D 3GS5 1ZFT 2FGP 2P7F 3GS1 2BCZ 1X9K 2NPZ Compare |
2QKB | 2QKB | C | 19 | 0 | 2.4 | 11-13-07 | HOMO SAPIENS | HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 20-MER RNA/DNA HYBRID | M.NOWOTNY,S.A.GAIDAMAKOV,R.GHIRLANDO,S.M.CERRITELLI, R.J.CROUCH,W.YANG | |
1QC0 | 1QC0 | CD | 57 | 28 | 1.6 | 11-11-99 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A 19 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
1DFU | 1DFU | MN | 38 | 15 | 1.8 | 12-02-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION | M.LU,T.A.STEITZ | |
1F27 | 1F27 | AB | 30 | 14 | 1.3 | 6-12-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT | J.NIX,D.SUSSMAN,C.WILSON | |
1R9F | 1R9F | BC | 38 | 19 | 1.9 | 1-27-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF P19 COMPLEXED WITH 19-BP SMALL INTERFERING RNA | K.YE,L.MALININA,D.J.PATEL | |
1T0E | 1T0E | AC | 35 | 15 | 1.7 | 6-15-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA | S.SHANDRICK,Q.ZHAO,Q.HAN,B.K.AYIDA,M.TAKAHASHI,G.C.WINTERS, K.B.SIMONSEN,D.VOURLOUMIS,T.HERMANN | |
3OL9 | 3OL9 | JKLNOP | 140 | 62 | 2.2 | 12-22-10 | synthetic,synthetic,synthetic | POLIOVIRUS POLYMERASE ELONGATION COMPLEX WITH 3'-DEOXY-CTP | P.GONG,O.B.PEERSEN | 3OLA 3OLB 3OL6 Compare |
3BT7 | 3BT7 | D | 36 | 11 | 2.4 | 4-29-08 | synthetic | STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE TRMA IN COMPLEX WITH 19 NUCLEOTIDE T-ARM ANALOGUE | A.ALIAN,R.M.STROUD,J.FINER-MOORE | |
3KS8 | 3KS8 | EF | 36 | 18 | 2.4 | 1-12-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF RESTON EBOLAVIRUS VP35 RNA BINDING DOMAIN IN COMPLEX WITH 18BP DSRNA | C.R.KIMBERLIN,Z.A.BORNHOLDT,S.LI,V.L.WOODS,I.J.MACRAE, E.O.SAPHIRE | |
2Y8Y | 2Y8Y | B | 18 | 5 | 1.4 | 5-18-11 | synthetic | STRUCTURE B OF CRISPR ENDORIBONUCLEASE CSE3 BOUND TO 19 NT RNA | D.G.SASHITAL,M.JINEK,J.A.DOUDNA | |
1ZEV | 1ZEV | AB | 36 | 13 | 1.6 | 10-25-05 | synthetic | CRYSTAL STRUCTURE OF A PATHOGENIC RNA: CUG REPEATS | B.H.MOOERS,J.S.LOGUE,J.A.BERGLUND | 3GM7 Compare |
2D2L | 2D2L | ABCD | 59 | 27 | 2.5 | 11-01-05 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A MINIMAL, ALL-RNA HAIRPIN RIBOZYME WITH A PROPYL LINKER (C3) AT POSITION U39 | S.ALAM,V.GRUM-TOKARS,J.KRUCINSKA,M.L.KUNDRACIK,J.E.WEDEKIND | |
2OE5 | 2OE5 | AB | 33 | 14 | 1.5 | 2-13-07 | synthetic,synthetic | .5 A X-RAY CRYSTAL STRUCTURE OF APRAMYCIN COMPLEX WITH RNA FRAGMENT GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 3'- OVERHANG | T.HERMANN,V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 2OE8 2OE6 Compare |
1R3E | 1R3E | DE | 50 | 20 | 2.1 | 11-04-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF TRNA PSEUDOURIDINE SYNTHASE TRUB AND ITS RNA COMPLEX: RNA-PROTEIN RECOGNITION THROUGH A COMBINATION OF RIGID DOCKING AND INDUCED FIT | H.PAN,S.AGARWALLA,D.T.MOUSTAKAS,J.FINER-MOORE,R.M.STROUD | |
1JBS | 1JBS | D | 34 | 12 | 2.0 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN AND A 29-MER SRD RNA ANALOG | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | |
2Y9H | 2Y9H | B | 17 | 6 | 2.5 | 5-18-11 | synthetic | STRUCTURE A OF CRISPR ENDORIBONUCLEASE CSE3 BOUND TO 19 NT RNA | D.G.SASHITAL,M.JINEK,J.A.DOUDNA | |
2O5I | 2O5I | H | 32 | 0 | 2.5 | 7-03-07 | synthetic | CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX | D.G.VASSYLYEV,T.H.TAHIROV,M.N.VASSYLYEVA | 2O5J 2PPB Compare |
3L26 | 3L26 | C | 16 | 8 | 2.4 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | |
406D | 406D | AE | 32 | 15 | 1.8 | 2-05-99 | engineered | '-R(*CP*AP*CP*CP*GP*GP*AP*UP*GP*GP*UP*(BRO) UP*CP*GP*GP*UP*G)-3' | S.A.SHAH,A.T.BRUNGER | |
2BU1 | 2BU1 | R | 32 | 12 | 2.2 | 8-18-05 | BACTERIOPHAGE MS2 | MS2-RNA HAIRPIN (5BRU-5) COMPLEX | E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS | 2C4Q 2C4Y 1ZDI 2IZ8 2B2E 1AQ4 2B2G 1AQ3 Compare |
405D | 405D | AB | 32 | 16 | 2.5 | 1-13-99 | synthetic | STRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHES | M.SUNDARALINGAM B.PAN,S.N.MITRA | |
420D | 420D | AB | 32 | 16 | 1.9 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES | B.PAN,S.N.MITRA,M.SUNDARALINGAM | |
1T0D | 1T0D | AB | 64 | 28 | 2.2 | 6-15-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA | S.SHANDRICK,Q.ZHAO,Q.HAN,B.K.AYIDA,M.TAKAHASHI,G.C.WINTERS, K.B.SIMONSEN,D.VOURLOUMIS,T.HERMANN | |
3AGV | 3AGV | SU | 25 | 2 | 2.1 | 11-10-10 | synthetic | CRYSTAL STRUCTURE OF A HUMAN IGG-APTAMER COMPLEX | Y.NOMURA,S.SUGIYAMA,T.SAKAMOTO,S.MIYAKAWA,H.ADACHI,K.TAKANO, S.MURAKAMI,T.INOUE,Y.MORI,Y.NAKAMURA,H.MATSUMURA | |
1ZX7 | 1ZX7 | ABGH | 116 | 49 | 2.1 | 9-20-05 | synthetic,synthetic | MOLECULAR RECOGNITION OF RNA BY NEOMYCIN AND A RESTRICTED NEOMYCIN DERIVATIVE | Q.ZHAO,F.ZHAO,K.F.BLOUNT,Q.HAN,Y.TOR,T.HERMANN | 2A04 1ZZ5 Compare |
1YZD | 1YZD | AB | 30 | 14 | 2.4 | 10-18-05 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX CONTAINING A SITE SPECIFIC 2'-AMINE SUBSTITUTION AT A C-G WATSON-CRICK BASE PAIR | C.M.GHERGHE,J.M.KRAHN,K.M.WEEKS | 1Z79 1YY0 2H1M Compare |
3DD2 | 3DD2 | B | 15 | 3 | 1.9 | 11-11-08 | synthetic | CRYSTAL STRUCTURE OF AN RNA APTAMER BOUND TO HUMAN THROMBIN | S.B.LONG,B.A.SULLENGER | |
397D | 397D | AB | 27 | 11 | 1.3 | 9-11-98 | synthetic,synthetic | A 1.3 A RESOLUTION CRYSTAL STRUCTURE OF THE HIV-1 TRANS- ACTIVATION RESPONSE REGION RNA STEM REVEALS A METAL ION- DEPENDENT BULGE CONFORMATION | J.A.IPPOLITO,T.A.STEITZ | |
1CSL | 1CSL | AB | 28 | 11 | 1.6 | 2-14-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE RRE HIGH AFFINITY SITE | J.A.IPPOLITO,T.A.STEITZ | |
1SDS | 1SDS | D | 45 | 0 | 1.8 | 5-18-04 | synthetic | STRUCTURE OF PROTEIN L7AE BOUND TO A K-TURN DERIVED FROM AN ARCHAEAL BOX H/ACA SRNA | T.HAMMA,A.FERRE-D'AMARE | |
2F8K | 2F8K | B | 15 | 6 | 2.0 | 1-24-06 | synthetic | SEQUENCE SPECIFIC RECOGNITION OF RNA HAIRPINS BY THE SAM DOMAIN OF VTS1 | T.AVIV,Z.LIN,G.BEN-ARI,C.A.SMIBERT,F.SICHERI | |
3OG8 | 3OG8 | CD | 28 | 14 | 2.4 | 11-03-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 14-BP BLUNT-ENDED DSRNA | P.LI | |
1G2J | 1G2J | A | 14 | 6 | 2.0 | 12-06-00 | synthetic | RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE | G.MINASOV,J.MATULIC-ADAMIC,C.J.WILDS,P.HAEBERLI,N.USMAN, L.BEIGELMAN,M.EGLI | |
2B3J | 2B3J | E | 28 | 7 | 2.0 | 1-24-06 | synthetic | CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS TRNA ADENOSINE DEAMINASE, TADA, IN COMPLEX WITH RNA | H.C.LOSEY,A.J.RUTHENBURG,G.L.VERDINE | |
2XLK | 2XLK | C | 28 | 9 | 1.8 | 9-22-10 | PSEUDOMONAS AERUGINOSA | CRYSTAL STRUCTURE OF THE CSY4-CRRNA COMPLEX, ORTHORHOMBIC FORM | R.E.HAURWITZ,M.JINEK,B.WIEDENHEFT,K.ZHOU,J.A.DOUDNA | 2XLJ Compare |
433D | 433D | AB | 28 | 14 | 2.1 | 12-04-98 | synthetic | CRYSTAL STRUCTURE OF A 14 BASE PAIR RNA DUPLEX WITH NONSYMMETRICAL TANDEM G.U WOBBLE BASE PAIRS | J.TRIKHA,D.J.FILMAN,J.M.HOGLE | |
3P59 | 3P59 | ABCDEFGH | 94 | 35 | 2.2 | 4-06-11 | synthetic,synthetic | FIRST CRYSTAL STRUCTURE OF A RNA NANOSQUARE | S.DIBROV,T.HERMANN,J.MCLEAN,J.PARSONS | |
3OIN | 3OIN | C | 14 | 4 | 1.9 | 12-01-10 | synthetic | CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE NEP1/EMG1 BOUND TO S- ADENOSYLHOMOCYSTEINE AND 1 MOLECULE OF COGNATE RNA | S.R.THOMAS,N.LARONDE-LEBLANC | 3OIJ Compare |
1MHK | 1MHK | LS | 26 | 9 | 2.5 | 9-06-02 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF A 26MER RNA MOLECULE, REPRESENTING A NEW RNA MOTIF, THE HOOK-TURN | S.SZEP,J.WANG,P.B.MOORE | |
1DUQ | 1DUQ | AB | 104 | 44 | 2.1 | 5-16-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE REV BINDING ELEMENT OF HIV-1 | L.-W.HUNG,E.L.HOLBROOK,S.R.HOLBROOK | |
1RNA | 1RNA | AB | 28 | 14 | 2.2 | 4-15-91 | synthetic | CRYSTALLOGRAPHIC STRUCTURE OF AN RNA HELIX: [U(U-A)6A]2 | A.C.DOCK-BREGEON,B.CHEVRIER,A.PODJARNY,J.JOHNSON,J.S.DE BEAR,G.R.GOUGH,P.T.GILHAM,D.MORAS | |
1L3Z | 1L3Z | A | 14 | 6 | 2.0 | 2-25-03 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF AN RNA HEPTAMER | K.SHI,B.PAN,M.SUNDARALINGAM | |
1NUJ | 1NUJ | CDEF | 96 | 37 | 1.8 | 8-19-03 | synthetic,synthetic | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | J.E.WEDEKIND,D.B.MCKAY | 1NUV Compare |
3CGS | 3CGS | AB | 24 | 10 | 1.6 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE CONTAINING THE PSEUDOURIDYLATED U2 SNRNA AND MAMMALIAN INTRON BRANCH SITE CONSENSUS SEQUENCES | Y.LIN,C.L.KIELKOPF | |
1FUF | 1FUF | AB | 26 | 12 | 1.7 | 11-09-01 | synthetic | CRYSTAL STRUCTURE OF A 14BP RNA OLIGONUCLEOTIDE CONTAINING DOUBLE UU BULGES: A NOVEL INTRAMOLECULAR U*(AU) BASE TRIPLE | J.DENG,Y.XIONG,C.SUDARSANAKUMAR,K.SHI,M.SUNDARALINGAM | 1IK5 Compare |
3CGP | 3CGP | AB | 24 | 10 | 1.6 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE OF A PSEUDOURIDINE-CONTAINING YEAST SPLICEOSOMAL U2 SNRNA-INTRON BRANCH SITE DUPLEX BOUND TO IODIDE IONS | Y.LIN,C.L.KIELKOPF | 3CGQ Compare |
1TFW | 1TFW | EH | 51 | 19 | 2.2 | 8-10-04 | synthetic,synthetic,synthetic,synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
2R22 | 2R22 | AB | 26 | 13 | 1.4 | 9-25-07 | synthetic | STRUCTURE OF THE NATIVE RNA TRIDECAMER R(GCGUUUGAAACGC) AT 1.5 A (NATMN) | Y.TIMSIT,S.BOMBARD | |
3CGR | 3CGR | AB | 24 | 10 | 2.1 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE CONTAINING THE PSEUDOURIDYLATED U2 SNRNA AND INTRON BRANCH SITE CONSENSUS SEQUENCES | Y.LIN,C.L.KIELKOPF | |
2XLI | 2XLI | B | 13 | 5 | 2.3 | 9-22-10 | PSEUDOMONAS AERUGINOSA | CRYSTAL STRUCTURE OF THE CSY4-CRRNA COMPLEX, MONOCLINIC FORM | R.E.HAURWITZ,M.JINEK,B.WIEDENHEFT,K.ZHOU,J.A.DOUDNA | |
1I9X | 1I9X | AB | 26 | 12 | 2.2 | 9-05-01 | synthetic | CRYSTAL STRUCTURE OF BPS-U2 SNRNA DUPLEX | J.A.BERGLUND,M.ROSBASH,S.C.SCHULTZ | |
2ATW | 2ATW | B | 24 | 0 | 2.2 | 10-11-05 | synthetic | STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX | B.BEUTH,S.PENNELL,K.B.ARNVIG,S.R.MARTIN,I.A.TAYLOR | |
354D | 354D | AB | 22 | 8 | 1.5 | 11-26-97 | ESCHERICHIA COLI,ESCHERICHIA COLI | STRUCTURE OF LOOP E FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | |
3CJZ | 3CJZ | AB | 24 | 10 | 1.8 | 10-14-08 | synthetic | EFFECTS OF N2,N2-DIMETHYLGUANOSINE ON RNA STRUCTURE AND STABILITY: CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH TANDEM M22G:A PAIRS | P.S.PALLAN,C.KREUTZ,S.BOSIO,R.MICURA,M.EGLI | |
3BSU | 3BSU | D | 24 | 0 | 2.1 | 3-25-08 | HOMO SAPIENS | HYBRID-BINDING DOMAIN OF HUMAN RNASE H1 IN COMPLEX WITH 12- MER RNA/DNA | M.NOWOTNY,S.M.CERRITELLI,R.GHIRLANDO,S.A.GAIDAMAKOV, R.J.CROUCH,W.YANG | |
2R20 | 2R20 | AB | 24 | 11 | 1.3 | 9-25-07 | synthetic | STRUCTURE OF THE RNA BROMINATED TRIDECAMER R(GCGUU- 5BUGAAACGC) AT 1.3 A (BR2) | Y.TIMSIT,S.BOMBARD | 2R21 2R1S Compare |
353D | 353D | AB | 24 | 11 | 2.4 | 11-10-97 | synthetic,synthetic | CRYSTAL STRUCTURE OF DOMAIN A OF THERMUS FLAVUS 5S RRNA AND THE CONTRIBUTION OF WATER MOLECULES TO ITS STRUCTURE | C.BETZEL,S.LORENZ,J.P.FURSTE,R.BALD,M.ZHANG,T.R.SCHNEIDER, K.S.WILSON,V.A.ERDMANN | |
157D | 157D | AB | 24 | 12 | 1.8 | 5-31-94 | synthetic | CRYSTAL AND MOLECULAR STRUCTURE OF R(CGCGAAUUAGCG): AN RNA DUPLEX CONTAINING TWO G(ANTI).A(ANTI) BASE-PAIRS | G.A.LEONARD,K.E.MCAULEY-HECHT,S.EBEL,D.M.LOUGH,T.BROWN, W.N.HUNTER | 1YYO 1YYK 1AL5 1CX5 1AC3 Compare |
3R2D | 3R2D | RS | 20 | 7 | 2.2 | 6-22-11 | AQUIFEX AEOLICUS | CRYSTAL STRUCTURE OF ANTITERMINATION FACTORS NUSB AND NUSE IN COMPLEX WITH DSRNA | J.R.STAGNO,X.JI | |
1QBP | 1QBP | AB | 72 | 29 | 2.1 | 11-26-99 | synthetic | CRYSTAL STRUCTURE OF A BROMINATED RNA HELIX WITH FOUR MISMATCHED BASE PAIRS | A.C.ANDERSON,R.H.O'NEIL,D.J.FILMAN,C.A.FREDERICK | |
280D | 280D | AB | 48 | 24 | 2.4 | 9-30-96 | engineered | THE STRUCTURE OF AN RNA DODECAMER SHOWS HOW TANDEM U-U BASE PAIRS INCREASE THE RANGE OF STABLE RNA STRUCTURES AND THE DIVERSITY OF RECOGNITION SITES | S.E.LIETZKE,C.L.BARNES,C.E.KUNDROT | 205D Compare |
2BS0 | 2BS0 | R | 21 | 6 | 2.5 | 3-22-06 | BACTERIOPHAGE MS2 | MS2 (N87AE89K MUTANT) - VARIANT QBETA RNA HAIRPIN COMPLEX | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | 1ZSE 2BS1 Compare |
1ZBI | 1ZBI | C | 12 | 0 | 1.9 | 7-12-05 | synthetic | BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D132N IN COMPLEX WITH 12-MER RNA/DNA HYBRID | M.NOWOTNY,S.A.GAIDAMAKOV,R.J.CROUCH,W.YANG | |
1KD5 | 1KD5 | AB | 22 | 10 | 1.6 | 3-04-03 | synthetic | THE CRYSTAL STRUCTURE OF R(GGUCACAGCCC)2 METAL FREE FORM | V.KACER,S.A.SCARINGE,J.N.SCARSDALE,J.P.RIFE | 1KD4 1KD3 Compare |
2NUG | 2NUG | CDEF | 44 | 20 | 1.7 | 11-20-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 1.7-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
1QCU | 1QCU | AB | 44 | 22 | 1.2 | 11-11-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN 18 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
3LRR | 3LRR | CD | 22 | 9 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 12 BP AU RICH 5' PPP DSRNA | P.LI | |
1LNT | 1LNT | AB | 22 | 11 | 1.7 | 6-03-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HIGHLY CONSERVED RNA INTERNAL LOOP OF SRP | J.DENG,Y.XIONG,B.PAN,M.SUNDARALINGAM | |
3FS0 | 3FS0 | AB | 21 | 8 | 2.3 | 2-24-09 | synthetic,synthetic | CLASS II LIGASE RIBOZYME PRODUCT-TEMPLATE DUPLEX, STRUCTURE 2 | J.N.PITT,A.R.FERRE-D'AMARE | |
2Q1O | 2Q1O | AB | 44 | 20 | 1.1 | 10-30-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGC-NF2- AAUUGGCG, WITH AN INCORPORATED 2,4-DIFLUOROTOLUYL RESIDUE (NF2) | F.LI,P.S.PALLAN | 2G92 Compare |
1YZ9 | 1YZ9 | CDEF | 44 | 20 | 2.1 | 11-22-05 | synthetic | CRYSTAL STRUCTURE OF RNASE III MUTANT E110Q FROM AQUIFEX AEOLICUS COMPLEXED WITH DOUBLE STRANDED RNA AT 2.1- ANGSTROM RESOLUTION | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
3IBK | 3IBK | AB | 22 | 12 | 2.2 | 5-12-10 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA QUADRUPLEX | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
3IEV | 3IEV | D | 11 | 0 | 1.9 | 8-25-09 | synthetic | CRYSTAL STRUCTURE OF ERA IN COMPLEX WITH MGGNP AND THE 3' END OF 16S RRNA | C.TU,X.JI | |
2ASB | 2ASB | B | 11 | 0 | 1.5 | 10-11-05 | synthetic | STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX | B.BEUTH,S.PENNELL,K.B.ARNVIG,S.R.MARTIN,I.A.TAYLOR | |
3HGA | 3HGA | X | 10 | 4 | 1.3 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF 4-SE-URIDINE DERIVATIZED RNA | JIA SHENG,SOARES ALEXEI,ZHEN HUANG | |
1MSW | 1MSW | R | 10 | 0 | 2.1 | 11-15-02 | synthetic | STRUCTURAL BASIS FOR THE TRANSITION FROM INITIATION TO ELONGATION TRANSCRIPTION IN T7 RNA POLYMERASE | Y.W.YIN,T.A.STEITZ | |
1DI2 | 1DI2 | CD | 20 | 10 | 1.9 | 12-02-99 | synthetic | CRYSTAL STRUCTURE OF A DSRNA-BINDING DOMAIN COMPLEXED WITH DSRNA: MOLECULAR BASIS OF DOUBLE-STRANDED RNA-PROTEIN INTERACTIONS | J.M.RYTER,S.C.SCHULTZ | 1RC7 3ADL 1FIX Compare |
1A34 | 1A34 | BC | 20 | 9 | 1.8 | 4-29-98 | synthetic,TOBACCO NECROSIS SATELLITE VIRUS | SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX | S.B.LARSON,J.DAY,A.J.GREENWOOD,A.MCPHERSON | 1RRR 2E2I 404D 2NVQ 2JA8 2E2H 1OO7 2YU9 1JB8 1PJG 3HOY 1EFO 2JA7 2VUM 3HOV 2NVT 2R7Z 3I4N 1R9S 1SFO 1PJO 1Y1W 2JA6 3HOX 1RRD 1G4Q 2NVZ 3I4M 1R9T 2NVX 3M4O 1Y77 2JA5 Compare |
3R1D | 3R1D | AB | 50 | 18 | 1.4 | 6-01-11 | synthetic | CRYSTAL STRUCTURE OF GC(8BRG)GCGGCGGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
3BSX | 3BSX | C | 19 | 0 | 2.3 | 4-08-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF HUMAN PUMILIO 1 IN COMPLEX WITH PUF5 RNA | Y.K.GUPTA,D.T.NAIR,R.P.WHARTON,A.K.AGGARWAL | |
1DQH | 1DQH | AB | 19 | 9 | 1.7 | 11-13-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS | Y.XIONG,M.SUNDARALINGAM | 1DQF Compare |
3R2C | 3R2C | R | 18 | 0 | 1.9 | 6-22-11 | AQUIFEX AEOLICUS | CRYSTAL STRUCTURE OF ANTITERMINATION FACTORS NUSB AND NUSE IN COMPLEX WITH BOXA RNA | J.R.STAGNO,X.JI | |
3NJ7 | 3NJ7 | AB | 60 | 24 | 1.9 | 8-25-10 | synthetic | .9 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
3K49 | 3K49 | B | 30 | 0 | 2.5 | 10-27-09 | synthetic | PUF3 RNA BINDING DOMAIN BOUND TO COX17 RNA 3' UTR RECOGNITION SEQUENCE SITE B | D.ZHU,C.R.STUMPF,J.M.KRAHN,M.WICKENS,T.M.T.HALL | 3K4E Compare |
3K5Z | 3K5Z | B | 9 | 0 | 2.4 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/GLD-1 FBEA G4A MUTANT COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
3BSO | 3BSO | PT | 16 | 7 | 1.7 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO CYTIDINE 5'-TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | 3H5X 3H5Y Compare |
479D | 479D | B | 9 | 0 | 1.9 | 5-15-00 | synthetic | CRYSTAL STRUCTURE A DNA:RNA HYBRID DUPLEX, A DYNAMIC MODEL FOR RNASE H RECOGNITION | Y.XIONG,M.SUNDARALINGAM | 2DQP 2DQQ 2DQO Compare |
2VNU | 2VNU | B | 9 | 0 | 2.3 | 4-08-08 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF SC RRP44 | E.LORENTZEN,J.BASQUIN,E.CONTI | |
3K5Q | 3K5Q | B | 9 | 0 | 2.2 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/FBE COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
1ZH5 | 1ZH5 | CD | 18 | 4 | 1.9 | 1-17-06 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3'-TERMINII OF NASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN | M.TEPLOVA,Y.R.YUAN,S.ILIN,L.MALININA,A.T.PHAN,A.TEPLOV, D.J.PATEL | 1YTY Compare |
1G2E | 1G2E | B | 9 | 1 | 2.3 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA | X.WANG,T.M.T.HALL | |
3K5Y | 3K5Y | B | 9 | 0 | 2.3 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/GLD-1 FBEA COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | 3QGB Compare |
3K64 | 3K64 | B | 9 | 0 | 2.0 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/FEM-3 PME COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
1YVP | 1YVP | CDG | 21 | 5 | 2.2 | 6-07-05 | synthetic,synthetic | RO AUTOANTIGEN COMPLEXED WITH RNAS | A.J.STEIN,G.FUCHS,C.FU,S.L.WOLIN,K.M.REINISCH | |
3K61 | 3K61 | B | 9 | 0 | 2.2 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/FOG-1 FBEA COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
3I5X | 3I5X | B | 9 | 0 | 1.9 | 9-08-09 | synthetic | STRUCTURE OF MSS116P BOUND TO SSRNA AND AMP-PNP | M.DEL CAMPO,A.M.LAMBOWITZ | 3I62 3I61 Compare |
3GIB | 3GIB | H | 9 | 0 | 2.4 | 11-17-09 | synthetic | CRYSTAL STUCTURE OF THE COMPLEX OF THE E. COLI HFQ WITH POLY(A) | T.M.LINK,P.VALENTIN-HANSEN,R.G.BRENNAN | |
2AO5 | 2AO5 | AB | 36 | 16 | 2.1 | 3-28-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX R(GGCGBRUGCGCU)2 WITH TERMINAL AND INTERNAL TANDEM G-U BASE PAIRS | R.UTSUNOMIYA,K.SUTO,D.BALASUNDARESAN,A.FUKAMIZU,P.K.KUMAR, H.MIZUNO | |
3K62 | 3K62 | B | 9 | 0 | 1.9 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/GLD-1 FBEB COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
3QGC | 3QGC | B | 9 | 0 | 1.9 | 3-23-11 | synthetic | CRYSTAL STRUCTURE OF FBF-2 R288Y MUTANT IN COMPLEX WITH GLD-1 FBEA A7U MUTANT | Y.WANG,C.QIU,Y.Y.KOH,L.OPPERMAN,L.GROSS,T.M.T.HALL,M.WICKENS | 3QG9 Compare |
421D | 421D | B | 9 | 0 | 1.8 | 1-05-99 | synthetic | '-D(*TP*TP*CP*TP*TP*(BRO)CP*TP*TP*C)-3', 5'- R(*GP*AP*AP*GP*AP*AP*GP*AP*A)-3' | Y.XIONG,M.SUNDARALINGAM | 2GUN Compare |
2G91 | 2G91 | AB | 15 | 6 | 1.5 | 4-03-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE AN RNA NONAMER R(GGUGCGC) D(BRC)R(C) | K.SHI,B.PAN,M.SUNDARALINGAM | |
2GQ6 | 2GQ6 | KL | 32 | 16 | 1.3 | 6-27-06 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA RACEMATE | W.RYPNIEWSKI,M.VALLAZZA,M.PERBANDT,S.KLUSSMANN,C.BETZEL, V.A.ERDMANN | 2GQ5 2G32 2GQ7 2GQ4 2GPM Compare |
3Q0S | 3Q0S | B | 8 | 0 | 2.0 | 3-16-11 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO2 IN COMPLEX WITH ERK2 NRE | G.LU,T.M.T.HALL | 3Q0N Compare |
2BGG | 2BGG | PQ | 29 | 10 | 2.2 | 3-31-05 | synthetic,synthetic | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT SIRNA DUPLEX. | J.S.PARKER,S.M.ROE,D.BARFORD | |
3KNC | 3KNC | B | 8 | 0 | 2.5 | 12-08-10 | synthetic | CRYSTAL STRUCTURE OF THE CENA-RNA HYBRID OCTAMER CE(GCGTAGCG) :R(CGCUACGC) | M.OVAERE,L.VAN MEERVELT | 1EJZ Compare |
3Q0Q | 3Q0Q | B | 8 | 0 | 2.0 | 3-16-11 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO2 IN COMPLEX WITH P38ALPHA NREA | G.LU,T.M.T.HALL | 3Q0L Compare |
3Q0R | 3Q0R | B | 8 | 0 | 2.0 | 3-16-11 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO2 IN COMPLEX WITH P38ALPHA NREB | G.LU,T.M.T.HALL | 3Q0M Compare |
1JZV | 1JZV | ABCD | 30 | 15 | 1.7 | 11-11-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BULGED RNA FROM THE SL2 STEM-LOOP OF THE HIV-1 PSI-RNA | Y.XIONG,C.SUDARSANAKUMAR,J.DENG,B.PAN,M.SUNDARALINGAM | |
402D | 402D | AB | 16 | 8 | 2.3 | 6-16-98 | synthetic | '-R(*CP*GP*CP*CP*AP*GP*CP*G)-3' | S.B.JANG,L.-W.HUNG,Y.-I.CHI,E.L.HOLBROOK,R.CARTER, S.R.HOLBROOK | |
398D | 398D | AB | 24 | 8 | 1.9 | 10-06-98 | synthetic | '-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS- STRAND SYNTHESIS OF HIV REPLICATION | U.MUELLER,G.MEIER,A.MOCHI-ONORI,L.CELLAI,H.HEUMANN | |
472D | 472D | AB | 16 | 8 | 1.9 | 11-27-00 | synthetic,synthetic | STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS | J.DENG,M.SUNDARALINGAM | |
3QRP | 3QRP | BC | 14 | 7 | 2.4 | 5-25-11 | synthetic,synthetic | STRUCTURE OF THERMUS THERMOPHILUS CSE3 BOUND TO AN RNA REPRESENTING A PRODUCT MIMIC COMPLEX | M.J.SCHELLENBERG,E.M.GESNER,E.L.GARSIDE,A.M.MACMILLAN | |
3GLP | 3GLP | AB | 40 | 12 | 1.2 | 5-26-09 | synthetic | .23 A RESOLUTION X-RAY STRUCTURE OF (GCUGCUGC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
259D | 259D | AB | 16 | 8 | 1.5 | 8-26-96 | synthetic | RNA HYDRATION: A DETAILED LOOK | M.EGLI,S.PORTMANN,N.USMAN | 1RXB Compare |
2G3S | 2G3S | AB | 80 | 40 | 1.5 | 1-16-07 | synthetic | RNA STRUCTURE CONTAINING GU BASE PAIRS | S.B.JANG,L.W.HUNG,M.S.JEONG,E.L.HOLBROOK,X.CHEN,D.H.TURNER, S.R.HOLBROOK | |
3I5Y | 3I5Y | B | 8 | 0 | 2.5 | 9-08-09 | synthetic | STRUCTURE OF MSS116P BOUND TO SSRNA CONTAINING A SINGLE 5- BRU AND AMP-PNP | M.DEL CAMPO,A.M.LAMBOWITZ | |
3MJ0 | 3MJ0 | B | 8 | 0 | 2.3 | 5-25-11 | synthetic | CRYSTAL STRUCTURE OF DROSOPHIA AGO-PAZ DOMAIN IN COMPLEX WITH 3'-END 2'-O-METHYLATED RNA | Y.HUANG,L.DING,J.MA | |
3BSN | 3BSN | PT | 16 | 6 | 1.8 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO 5-NITROCYTIDINE TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | |
1N35 | 1N35 | BC | 13 | 5 | 2.5 | 12-25-02 | synthetic,synthetic | LAMBDA3 ELONGATION COMPLEX WITH FOUR PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | 1UON Compare |
3R1C | 3R1C | CD | 288 | 144 | 2.0 | 6-01-11 | synthetic | CRYSTAL STRUCTURE OF GCGGCGGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
439D | 439D | AB | 16 | 8 | 1.6 | 9-14-01 | synthetic,synthetic | '-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'- R(*CP*CP*GP*CP*CP*UP*GP*G)-3' | M.PERBANDT,S.LORENZ,M.VALLAZZA,V.A.ERDMANN,C.BETZEL | |
1J9H | 1J9H | AB | 32 | 16 | 1.4 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH URIDINE BULGES | Y.XIONG,J.DENG,C.SUDARSANAKUMAR,M.SUNDARALINGAM | |
438D | 438D | AB | 16 | 8 | 2.5 | 5-12-99 | synthetic | STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS | K.SHI,M.C.WAHL,M.SUNDARALINGAM | |
1M8W | 1M8W | C | 15 | 0 | 2.2 | 9-25-02 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH NRE1-19 RNA | X.WANG,J.MCLACHLAN,P.D.ZAMORE,T.M.T.HALL | 1M8X Compare |
1FXL | 1FXL | B | 8 | 1 | 1.8 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA | X.WANG,T.M.T.HALL | |
3EQT | 3EQT | CD | 16 | 8 | 2.0 | 3-10-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN LGP2 C-TERMINAL DOMAIN IN COMPLEX WITH DSRNA | P.LI,X.LI | |
165D | 165D | AB | 16 | 8 | 1.6 | 8-31-94 | synthetic | THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE | W.CRUSE,P.SALUDJIAN,E.BIALA,P.STRAZEWSKI,T.PRANGE,O.KENNARD | |
3L25 | 3L25 | CF | 16 | 8 | 2.0 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | |
435D | 435D | AB | 28 | 14 | 1.4 | 6-14-99 | synthetic,synthetic | '-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3' | U.MUELLER,H.SCHUEBEL,M.SPRINZL,U.HEINEMANN | |
2VOD | 2VOD | C | 14 | 0 | 2.1 | 5-06-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAUUUU | O.KOTIK-KOGAN,E.R.VALENTINE,D.SANFELICE,M.R.CONTE,S.CURRY | |
2VAL | 2VAL | AC | 28 | 14 | 2.0 | 10-16-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN ESCHERICHIA COLI TRNAGLY MICROHELIX AT 2.0 ANGSTROM RESOLUTION | C.FORSTER,A.B.E.BRAUER,M.PERBANDT,D.LEHMANN,J.P.FURSTE, C.BETZEL,V.A.ERDMANN | |
2V6W | 2V6W | AB | 14 | 7 | 1.8 | 11-06-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | TRNASER ACCEPTOR STEM: CONFORMATION AND HYDRATION OF A MICROHELIX IN A CRYSTAL STRUCTURE AT 1.8 ANGSTROM RESOLUTION | C.FOERSTER,A.B.E.BRAUER,S.BRODE,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN | |
409D | 409D | AB | 42 | 18 | 2.5 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES | B.PAN,S.N.MITRA,L.SUN,D.HART,M.SUNDARALINGAM | |
2JLX | 2JLX | D | 14 | 0 | 2.2 | 11-25-08 | synthetic | DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA AND ADP- VANADATE | D.H.LUO,T.XU,R.P.WATSON,D.S.BECKER,A.SAMPATH,W.JAHNKE, S.S.YEONG,C.H.WANG,S.P.LIM,S.G.VASUDEVAN,J.LESCAR | 2JLY Compare |
3S49 | 3S49 | AB | 49 | 18 | 2.3 | 6-29-11 | synthetic | RNA CRYSTAL STRUCTURE WITH 2-SE-URIDINE MODIFICATION | J.SHENG,J.GAN,H.SUN,A.E.H.HASSAN,S.JIANG,Z.HUANG | |
3GVN | 3GVN | AB | 14 | 7 | 1.2 | 7-28-09 | synthetic,synthetic | THE 1.2 ANGSTROEM CRYSTAL STRUCTURE OF AN E.COLI TRNASER ACCEPTOR STEM MICROHELIX REVEALS TWO MAGNESIUM BINDING SITES | A.EICHERT,J.P.FURSTE,A.SCHREIBER,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FORSTER | |
1WMQ | 1WMQ | C | 14 | 0 | 1.6 | 3-15-05 | synthetic | STRUCTURE OF THE HUTP ANTITERMINATION COMPLEX BOUND TO A SINGLE STRANDED REGION OF HUT MRNA | T.S.KUMAREVEL,H.MIZUNO,P.K.R.KUMAR | 1WRQ Compare |
466D | 466D | AB | 28 | 14 | 1.2 | 8-16-99 | synthetic,synthetic | DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX | U.MUELLER,Y.A.MULLER,R.HERBST-IRMER,M.SPRINZL,U.HEINEMANN | 434D 464D Compare |
2G4B | 2G4B | B | 7 | 0 | 2.5 | 7-25-06 | synthetic | STRUCTURE OF U2AF65 VARIANT WITH POLYURIDINE TRACT | E.A.SICKMIER,C.L.KIELKOPF | |
3HSB | 3HSB | X | 7 | 0 | 2.2 | 6-23-10 | synthetic | CRYSTAL STRUCTURE OF YMAH (HFQ) FROM BACILLUS SUBTILIS IN COMPLEX WITH AN RNA APTAMER | S.BABA,T.SOMEYA,T.KUMASAKA,G.KAWAI,K.NAKAMURA | |
1WPU | 1WPU | C | 14 | 0 | 1.5 | 8-30-05 | synthetic | CRYSTAL STRUCTURE OF THE HUTP ANTITERMINATION COMPLEX BOUND TO A SINGLE STRANDED REGION OF HUT MRNA | T.S.KUMAREVEL,H.MIZUNO,P.K.R.KUMAR | |
2V7R | 2V7R | AB | 14 | 7 | 1.2 | 3-18-08 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION | C.FOERSTER,M.MANKOWSKA,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN | |
3KMS | 3KMS | BC | 12 | 5 | 2.2 | 7-07-10 | synthetic,synthetic | G62S MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA TRIGONAL STRUCTURE | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | 3KLV 3KNA Compare |
3R1E | 3R1E | AB | 14 | 6 | 1.0 | 6-01-11 | synthetic | CRYSTAL STRUCTURE OF GC(8BRG)GCGGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
2PO1 | 2PO1 | C | 7 | 0 | 1.9 | 3-18-08 | synthetic | CRYSTAL STRUCTURE OF THE P. ABYSSI EXOSOME RNASE PH RING COMPLEXED WITH A SINGLE STRANDED 10-MER POLY(A) RNA | M.V.A.S.NAVARRO,B.G.GUIMARAES | |
2DB3 | 2DB3 | G | 24 | 0 | 2.2 | 5-02-06 | synthetic | STRUCTURAL BASIS FOR RNA UNWINDING BY THE DEAD-BOX PROTEIN DROSOPHILA VASA | T.SENGOKU,O.NUREKI,A.NAKAMURA,S.KOBAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
2VUQ | 2VUQ | AB | 14 | 7 | 1.2 | 3-10-09 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY ACCEPTOR STEM MICROHELIX (DERIVED FROM THE GENE SEQUENCE DG9990) AT 1.18 ANGSTROEM RESOLUTION | A.EICHERT,M.PERBANDT,A.SCHREIBER,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
2VON | 2VON | C | 14 | 0 | 2.1 | 5-06-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAAUUU | O.KOTIK-KOGAN,E.R.VALENTINE,D.SANFELICE,M.R.CONTE,S.CURRY | |
2A0P | 2A0P | AB | 14 | 6 | 1.9 | 8-16-05 | synthetic | CRYSTAL STRUCTURE OF RNA OLIGOMER CONTAINING 4'-THIORIBOSE | P.HAEBERLI,I.BERGER,P.S.PALLAN,M.EGLI | |
2W89 | 2W89 | AB | 28 | 14 | 2.0 | 11-17-09 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE E.COLI TRNAARG AMINOACYL STEM ISSOACCEPTOR RR-1660 AT 2.0 ANGSTROEM RESOLUTION | A.EICHERT,A.SCHREIBER,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
2J0S | 2J0S | E | 6 | 0 | 2.2 | 9-06-06 | HOMO SAPIENS | THE CRYSTAL STRUCTURE OF THE EXON JUNCTION COMPLEX AT 2.2 A RESOLUTION | F.BONO,J.EBERT,E.LORENTZEN,E.CONTI | 2HYI 3EX7 2J0Q Compare |
1OSU | 1OSU | A | 18 | 6 | 1.4 | 4-04-96 | synthetic | STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU- OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS | M.C.WAHL,S.T.RAO,M.SUNDARALINGAM | |
1J8G | 1J8G | A | 24 | 20 | 0.6 | 11-23-01 | synthetic | X-RAY ANALYSIS OF A RNA TETRAPLEX R(UGGGGU)4 AT ULTRA-HIGH RESOLUTION | J.DENG,Y.XIONG,M.SUNDARALINGAM | |
3MDI | 3MDI | C | 6 | 1 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UGUAAA | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
3AHU | 3AHU | X | 6 | 0 | 2.2 | 7-13-11 | synthetic | CRYSTAL STRUCTURE OF YMAH (HFQ) FROM BACILLUS SUBTILIS IN COMPLEX WITH AN RNA APTAMER. | S.BABA,T.SOMEYA,T.KUMASAKA,G.KAWAI,K.NAKAMURA | |
3G9Y | 3G9Y | C | 6 | 1 | 1.4 | 3-03-09 | synthetic | CRYSTAL STRUCTURE OF THE SECOND ZINC FINGER FROM ZRANB2/ZNF265 BOUND TO 6 NT SSRNA SEQUENCE AGGUAA | F.E.LOUGHLIN,A.P.MCGRATH,M.LEE,J.M.GUSS,J.P.MACKAY | |
2GXB | 2GXB | EF | 12 | 6 | 2.2 | 5-01-07 | synthetic | CRYSTAL STRUCTURE OF THE ZA DOMAIN BOUND TO Z-RNA | A.ATHANASIADIS,D.PLACIDO,A.RICH | 1T4X Compare |
2G8F | 2G8F | B | 6 | 0 | 1.6 | 4-25-06 | synthetic | B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE) | M.NOWOTNY,W.YANG | 2G8U 2G8W 2G8I 2G8K 2R7Y 2G8H 2G8V Compare |
2XZO | 2XZO | D | 6 | 0 | 2.4 | 3-30-11 | SYNTHETIC CONSTRUCT | UPF1 HELICASE - RNA COMPLEX | S.CHAKRABARTI,U.JAYACHANDRAN,F.BONNEAU,F.FIORINI,C.BASQUIN,S.DOMCKE, H.LE HIR,E.CONTI | |
1UTD | 1UTD | 8 | 35 | 0 | 2.1 | 1-15-04 | BACILLUS STEAROTHERMOPHILUS | THE STRUCTURE OF THE TRP RAN-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A 63-NUCLEOTIDE RNA MOLECULE CONTAINING GAGUUU REPEATS | N.H.HOPCROFT,A.MANFREDO,A.L.WENDT,A.M.BRZOZOWSKI,P.GOLLNICK, A.A.ANTSON | |
3NNC | 3NNC | B | 6 | 0 | 2.2 | 10-27-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX | M.TEPLOVA,J.SONG,H.GAW,A TEPLOV,D.J.PATEL | |
2A8V | 2A8V | DE | 9 | 0 | 2.4 | 4-26-99 | synthetic,ESCHERICHIA COLI | RHO TRANSCRIPTION TERMINATION FACTOR/RNA COMPLEX | C.E.BOGDEN,D.FASS,N.BERGMAN,M.D.NICHOLS,J.M.BERGER | |
3FHT | 3FHT | C | 12 | 0 | 2.2 | 2-17-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN DBP5 IN COMPLEX WITH AMPPNP AND RNA | H.VON MOELLER,E.CONTI | 3G0H Compare |
3MDG | 3MDG | C | 6 | 1 | 2.2 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UUGUAU | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
2JLZ | 2JLZ | C | 12 | 0 | 2.2 | 11-25-08 | synthetic | DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA AND ADP | D.H.LUO,T.XU,R.P.WATSON,D.S.BECKER,A.SAMPATH,W.JAHNKE, S.S.YEONG,C.H.WANG,S.P.LIM,S.G.VASUDEVAN,J.LESCAR | |
3NNA | 3NNA | B | 5 | 0 | 1.9 | 10-27-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX | M.TEPLOVA,J.SONG,H.GAW,A TEPLOV,D.J.PATEL | |
2Q66 | 2Q66 | X | 5 | 0 | 1.8 | 8-28-07 | synthetic | STRUCTURE OF YEAST POLY(A) POLYMERASE WITH ATP AND OLIGO(A) | A.BOHM,P.BALBO | |
3KMQ | 3KMQ | BC | 10 | 5 | 2.1 | 7-07-10 | synthetic,synthetic | G62S MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA, TETRAGONAL STRUCTURE | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | |
3O8R | 3O8R | C | 5 | 0 | 2.3 | 1-05-11 | synthetic | VISUALIZING ATP-DEPENDENT RNA TRANSLOCATION BY THE NS3 HELICASE FROM HCV | T.C.APPLEBY,J.R.SOMOZA | |
2JLU | 2JLU | C | 10 | 0 | 2.0 | 11-25-08 | synthetic | DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA | D.H.LUO,T.XU,R.P.WATSON,D.S.BECKER,A.SAMPATH,W.JAHNKE, S.S.YEONG,C.H.WANG,S.P.LIM,S.G.VASUDEVAN,J.LESCAR | 2JLV Compare |
3M7N | 3M7N | X | 14 | 0 | 2.4 | 4-28-10 | synthetic | ARCHAEOGLOBUS FULGIDUS EXOSOME WITH RNA BOUND TO THE ACTIVE SITE | S.HARTUNG,K.-P.HOPFNER | |
3O8C | 3O8C | C | 5 | 0 | 2.0 | 1-05-11 | synthetic | VISUALIZING ATP-DEPENDENT RNA TRANSLOCATION BY THE NS3 HELICASE FROM HCV | T.C.APPLEBY,J.R.SOMOZA | |
3JXR | 3JXR | AB | 10 | 4 | 1.2 | 2-09-10 | synthetic | X-RAY STRUCTURE OF R[CGCG(5-FLUORO)CG]2 | D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK,W.RYPNIEWSKI | 3JXQ Compare |
1J6S | 1J6S | A | 20 | 12 | 1.4 | 8-05-03 | synthetic | CRYSTAL STRUCTURE OF AN RNA TETRAPLEX (UGAGGU)4 WITH A- TETRADS, G-TETRADS, U-TETRADS AND G-U OCTADS | B.PAN,Y.XIONG,K.SHI,J.DENG,M.SUNDARALINGAM | |
1UVM | 1UVM | D | 15 | 0 | 2.0 | 2-19-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 5NT RNA CONFORMATION A | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
3PEY | 3PEY | B | 5 | 0 | 1.4 | 3-23-11 | synthetic | S. CEREVISIAE DBP5 BOUND TO RNA AND ADP BEF3 | B.MONTPETIT,N.D.THOMSEN,K.J.HELMKE,M.A.SEELIGER,J.M.BERGER,K.WEIS | 3PEW Compare |
3NMR | 3NMR | B | 5 | 0 | 1.9 | 10-27-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX | M.TEPLOVA,J.SONG,H.GAW,A TEPLOV,D.J.PATEL | |
3D2S | 3D2S | E | 18 | 0 | 1.7 | 12-02-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF MBNL1 TANDEM ZINC FINGER 3 AND 4 DOMAIN IN COMPLEX WITH CGCUGU RNA | M.TEPLOVA,D.J.PATEL | |
2JEA | 2JEA | C | 5 | 0 | 2.3 | 4-03-07 | synthetic | STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA | E.LORENTZEN,E.CONTI | |
1UVL | 1UVL | B | 15 | 0 | 2.0 | 2-26-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 5NT RNA CONFORMATION B | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
377D | 377D | AB | 20 | 8 | 1.8 | 8-10-98 | synthetic | '-R(*CP*GP*UP*AP*CP*DG)-3' | R.BISWAS,S.N.MITRA,M.SUNDARALINGAM | |
1KNZ | 1KNZ | W | 20 | 0 | 2.5 | 1-17-02 | synthetic | RECOGNITION OF THE ROTAVIRUS MRNA 3' CONSENSUS BY AN ASYMMETRIC NSP3 HOMODIMER | R.C.DEO,C.M.GROFT,K.R.RAJASHANKAR,S.K.BURLEY | |
3KOA | 3KOA | BC | 9 | 3 | 2.4 | 7-07-10 | synthetic,synthetic | M296I MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA AND GTP | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | |
1P79 | 1P79 | A | 20 | 8 | 1.1 | 11-04-03 | synthetic | CRYSTAL STRUCTURE OF A BULGED RNA TETRAPLEX: IMPLICATIONS FOR A NOVEL BINDING SITE IN RNA TETRAPLEX | B.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
1YTU | 1YTU | CD | 9 | 4 | 2.5 | 4-05-05 | synthetic,synthetic | STRUCTURAL BASIS FOR 5'-END-SPECIFIC RECOGNITION OF THE GUIDE RNA STRAND BY THE A. FULGIDUS PIWI PROTEIN | J.B.MA,Y.R.YUAN,G.MEISTER,Y.PEI,T.TUSCHL,D.J.PATEL | |
2AWE | 2AWE | ABCD | 39 | 24 | 2.1 | 2-07-06 | engineered | BASE-TETRAD SWAPPING RESULTS IN DIMERIZATION OF RNA QUADRUPLEXES: IMPLICATIONS FOR FORMATION OF I-MOTIF RNA OCTAPLEX | B.PAN,K.SHI,M.SUNDARALINGAM | |
2GRB | 2GRB | EFGH | 32 | 31 | 1.4 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA QUADRUPLEX CONTAINING INOSINE- TETRAD | B.PAN,K.SHI,M.SUNDARALINGAM | |
3P4B | 3P4B | A | 24 | 0 | 1.4 | 1-05-11 | synthetic | ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RA2U2-P3 | P.S.PALLAN,E.M.GREENE,P.A.JICMAN,R.K.PANDEY,M.MANOHARAN,E.ROZNERS, M.EGLI | |
1MDG | 1MDG | A | 20 | 16 | 1.5 | 8-12-03 | synthetic | AN ALTERNATING ANTIPARALLEL OCTAPLEX IN AN RNA CRYSTAL STRUCTURE | B.C.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
1UVI | 1UVI | D | 12 | 0 | 2.1 | 2-19-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 6NT RNA | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
3P4C | 3P4C | A | 8 | 0 | 1.1 | 1-05-11 | synthetic | ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RA2U2-R32 | P.S.PALLAN,E.M.GREENE,P.A.JICMAN,R.K.PANDEY,M.MANOHARAN,E.ROZNERS, M.EGLI | |
1UVJ | 1UVJ | D | 12 | 0 | 1.9 | 2-19-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 7NT RNA | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
3P4D | 3P4D | A | 8 | 0 | 1.9 | 1-05-11 | synthetic | ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RC4G4 | P.S.PALLAN,E.M.GREENE,P.A.JICMAN,R.K.PANDEY,M.MANOHARAN,E.ROZNERS, M.EGLI | |
1UTF | 1UTF | 0 | 25 | 0 | 1.9 | 1-15-04 | BACILLUS STEAROTHERMOPHILUS | THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A RNA MOLECULE CONTAINING UAGAU REPEATS (PART I) | N.H.HOPCROFT,A.MANFREDO,A.L.WENDT,A.M.BRZOZOWSKI,P.GOLLNICK, A.A.ANTSON | 1UTV Compare |
2XNR | 2XNR | C | 3 | 0 | 1.6 | 9-08-10 | SACCHAROMYCES CEREVISIAE | STRUCTURAL INSIGHTS INTO CIS ELEMENT RECOGNITION OF NON- POLYADENYLATED RNAS BY THE NAB3-RRM | B.M.LUNDE,M.HORNER,A.MEINHART | |
2VOO | 2VOO | C | 6 | 0 | 1.8 | 5-06-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER UUUUUUUU | O.KOTIK-KOGAN,E.R.VALENTINE,D.SANFELICE,M.R.CONTE,S.CURRY | |
1H2C | 1H2C | R | 3 | 0 | 1.6 | 4-10-03 | ESCHERICHIA COLI | EBOLA VIRUS MATRIX PROTEIN VP40 N-TERMINAL DOMAIN IN COMPLEX WITH RNA (HIGH-RESOLUTION VP40[55-194] VARIANT). | F.X.GOMIS-RUTH,A.DESSEN,A.BRACHER,H.D.KLENK,W.WEISSENHORN | 1H2D Compare |
2X1F | 2X1F | B | 2 | 0 | 1.6 | 2-02-10 | synthetic | STRUCTURE OF RNA15 RRM WITH BOUND RNA (GU) | C.PANCEVAC,D.C.GOLDSTONE,A.RAMOS,I.A.TAYLOR | |
3ER9 | 3ER9 | D | 2 | 0 | 2.1 | 6-16-09 | synthetic | CRYSTAL STRUCTURE OF THE HETERODIMERIC VACCINIA VIRUS MRNA POLYADENYLATE POLYMERASE COMPLEX WITH UU AND 3'-DEOXY ATP | C.LI,H LI,S.ZHOU,T.L.POULOS,P.D.GERSHON | |
3GPQ | 3GPQ | EF | 3 | 0 | 2.0 | 7-21-09 | synthetic | CRYSTAL STRUCTURE OF MACRO DOMAIN OF CHIKUNGUNYA VIRUS IN COMPLEX WITH RNA | H.MALET,S.JAMAL,B.COUTARD,B.CANARD | |
1QLN | 1QLN | R | 2 | 0 | 2.4 | 2-04-00 | BACTERIOPHAGE T7 | STRUCTURE OF A TRANSCRIBING T7 RNA POLYMERASE INITIATION COMPLEX | G.M.T.CHEETHAM,T.A.STEITZ | |
2X1A | 2X1A | B | 1 | 0 | 2.0 | 2-02-10 | synthetic | STRUCTURE OF RNA15 RRM WITH RNA BOUND (G) | C.PANCEVAC,D.C.GOLDSTONE,A.RAMOS,I.A.TAYLOR | |
1B2M | 1B2M | CDE | 3 | 0 | 2.0 | 3-25-99 | synthetic | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | R.K.ARNI,L.WATANABE,R.J.WARD,R.J.KREITMAN,K.KUMAR,F.G.WALZ JR. | |
1UVK | 1UVK | BDF | 3 | 0 | 2.5 | 2-19-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 DEAD-END COMPLEX | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |