PDBID | FR3D analysis | Chain(s) | NTs | Pairs | Res | Date | Organism | Description provided by author | Author | Also represents |
4FE5 | 4FE5 | B | 67 | 34 | 1.3 | 6-27-12 | synthetic | CRYSTAL STRUCTURE OF THE XPT-PBUX GUANINE RIBOSWITCH APTAMER DOMAIN IN COMPLEX WITH HYPOXANTHINE | C.D.STODDARD,J.J.TRAUSCH,J.WIDMANN,J.MARCANO,R.KNIGHT,R.T.BATEY | 3FO4 2XNZ 3GOG 3FO6 2EET 3GAO 2G9C 2EEV 3GER 2EES 2EEW 1Y27 3DS7 3GES 2EEU 3G4M 3GOT 2B57 Compare |
3CZW | 3CZW | X | 28 | 14 | 1.4 | 9-09-08 | synthetic | X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX | W.RYPNIEWSKI,D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK | 3D0M Compare |
3DVZ | 3DVZ | A | 27 | 10 | 1.0 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA | V.OLIERIC,U.RIEDER,K.LANG,A.SERGANOV,C.SCHULZE-BRIESE,R.MICURA, P.DUMAS,E.ENNIFAR | 483D 1Q9A 480D 1MSY 3S8U 3S7C 3DW6 3DW4 3DW7 3DW5 Compare |
1L2X | 1L2X | A | 27 | 15 | 1.2 | 3-22-02 | synthetic | ATOMIC RESOLUTION CRYSTAL STRUCTURE OF A VIRAL RNA PSEUDOKNOT | M.EGLI,G.MINASOV,L.SU,A.RICH | 437D 1L3D Compare |
2A43 | 2A43 | A | 26 | 14 | 1.3 | 9-27-05 | synthetic | CRYSTAL STRUCTURE OF A LUTEOVIRAL RNA PSEUDOKNOT AND MODEL FOR A MINIMAL RIBOSOMAL FRAMESHIFTING MOTIF | P.S.PALLAN,W.S.MARSHALL,J.HARP,F.C.JEWETT III,Z.WAWRZAK, B.A.BROWN II,A.RICH,M.EGLI | |
2Q1R | 2Q1R | A | 24 | 12 | 1.1 | 10-30-07 | engineered | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH. | F.LI,P.S.PALLAN | |
3NJ6 | 3NJ6 | A | 20 | 8 | 0.9 | 8-25-10 | synthetic | .95 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
1F27 | 1F27 | AB | 30 | 14 | 1.3 | 6-12-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT | J.NIX,D.SUSSMAN,C.WILSON | |
3SJ2 | 3SJ2 | AB | 36 | 17 | 1.4 | 8-03-11 | synthetic,synthetic | A CRYSTAL STRUCTURE OF A MODEL OF THE REPEATING R(CGG) TRANSCRIPT FOUND IN FRAGILE X SYNDROME | A.KUMAR,F.PENGFEI,H.PARK,K.NETTLES,M.GUO,M.D.DISNEY | |
2Y8Y | 2Y8Y | B | 18 | 5 | 1.4 | 5-18-11 | synthetic | STRUCTURE B OF CRISPR ENDORIBONUCLEASE CSE3 BOUND TO 19 NT RNA | D.G.SASHITAL,M.JINEK,J.A.DOUDNA | |
3ND3 | 3ND3 | A | 16 | 0 | 1.4 | 9-21-11 | synthetic | UHELIX 16-MER DSRNA | B.H.MOOERS,A.SINGH | 3ND4 Compare |
397D | 397D | AB | 27 | 11 | 1.3 | 9-11-98 | synthetic,synthetic | A 1.3 A RESOLUTION CRYSTAL STRUCTURE OF THE HIV-1 TRANS- ACTIVATION RESPONSE REGION RNA STEM REVEALS A METAL ION- DEPENDENT BULGE CONFORMATION | J.A.IPPOLITO,T.A.STEITZ | |
2R22 | 2R22 | AB | 26 | 13 | 1.4 | 9-25-07 | synthetic | STRUCTURE OF THE NATIVE RNA TRIDECAMER R(GCGUUUGAAACGC) AT 1.5 A (NATMN) | Y.TIMSIT,S.BOMBARD | |
354D | 354D | AB | 22 | 8 | 1.5 | 11-26-97 | ESCHERICHIA COLI,ESCHERICHIA COLI | STRUCTURE OF LOOP E FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | |
2R20 | 2R20 | AB | 24 | 11 | 1.3 | 9-25-07 | synthetic | STRUCTURE OF THE RNA BROMINATED TRIDECAMER R(GCGUU- 5BUGAAACGC) AT 1.3 A (BR2) | Y.TIMSIT,S.BOMBARD | 2R21 2R1S Compare |
1QCU | 1QCU | AB | 44 | 22 | 1.2 | 11-11-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN 18 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
2Q1O | 2Q1O | AB | 44 | 20 | 1.1 | 10-30-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGC-NF2- AAUUGGCG, WITH AN INCORPORATED 2,4-DIFLUOROTOLUYL RESIDUE (NF2) | F.LI,P.S.PALLAN | 2G92 Compare |
2ASB | 2ASB | B | 11 | 0 | 1.5 | 10-11-05 | synthetic | STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX | B.BEUTH,S.PENNELL,K.B.ARNVIG,S.R.MARTIN,I.A.TAYLOR | |
3HGA | 3HGA | X | 10 | 4 | 1.3 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF 4-SE-URIDINE DERIVATIZED RNA | JIA SHENG,SOARES ALEXEI,ZHEN HUANG | |
3R1D | 3R1D | AB | 50 | 18 | 1.4 | 6-01-11 | synthetic | CRYSTAL STRUCTURE OF GC(8BRG)GCGGCGGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
1PJO | 1PJO | A | 10 | 0 | 1.1 | 12-09-03 | synthetic | CRYSTAL STRUCTURE OF AN RNA/DNA HYBRID OF HIV-1 PPT | M.L.KOPKA,L.LAVELLE,G.W.HAN,H.-L.NG,R.E.DICKERSON | 1RRR 1A34 2E2I 404D 2NVQ 2JA8 2E2H 1OO7 2YU9 1JB8 1PJG 3HOY 1EFO 2JA7 2VUM 3HOV 2NVT 2R7Z 3I4N 1R9S 1SFO 1Y1W 2JA6 3HOX 1RRD 1G4Q 2NVZ 3I4M 1R9T 2NVX 3M4O 1Y77 2JA5 Compare |
3OK4 | 3OK4 | D | 30 | 0 | 1.1 | 11-30-11 | synthetic | CRYSTAL STRUCTURE OF THE ANA:RNA DECAMER SUFFERING FROM LATTICE TRANSLOCATION DEFECTS | M.OVAERE,L.VAN MEERVELT | 3OK2 2KP4 219D 2KP3 2BJ6 Compare |
2G91 | 2G91 | AB | 15 | 6 | 1.5 | 4-03-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE AN RNA NONAMER R(GGUGCGC) D(BRC)R(C) | K.SHI,B.PAN,M.SUNDARALINGAM | |
2GQ6 | 2GQ6 | KL | 32 | 16 | 1.3 | 6-27-06 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA RACEMATE | W.RYPNIEWSKI,M.VALLAZZA,M.PERBANDT,S.KLUSSMANN,C.BETZEL, V.A.ERDMANN | 2GQ5 2G32 2GQ7 2GQ4 2GPM Compare |
3GLP | 3GLP | AB | 40 | 12 | 1.2 | 5-26-09 | synthetic | .23 A RESOLUTION X-RAY STRUCTURE OF (GCUGCUGC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
259D | 259D | AB | 16 | 8 | 1.5 | 8-26-96 | synthetic | RNA HYDRATION: A DETAILED LOOK | M.EGLI,S.PORTMANN,N.USMAN | 1RXB Compare |
2G3S | 2G3S | AB | 80 | 40 | 1.5 | 1-16-07 | synthetic | RNA STRUCTURE CONTAINING GU BASE PAIRS | S.B.JANG,L.W.HUNG,M.S.JEONG,E.L.HOLBROOK,X.CHEN,D.H.TURNER, S.R.HOLBROOK | |
1J9H | 1J9H | AB | 32 | 16 | 1.4 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH URIDINE BULGES | Y.XIONG,J.DENG,C.SUDARSANAKUMAR,M.SUNDARALINGAM | |
435D | 435D | AB | 28 | 14 | 1.4 | 6-14-99 | synthetic,synthetic | '-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3' | U.MUELLER,H.SCHUEBEL,M.SPRINZL,U.HEINEMANN | |
3GVN | 3GVN | AB | 14 | 7 | 1.2 | 7-28-09 | synthetic,synthetic | THE 1.2 ANGSTROEM CRYSTAL STRUCTURE OF AN E.COLI TRNASER ACCEPTOR STEM MICROHELIX REVEALS TWO MAGNESIUM BINDING SITES | A.EICHERT,J.P.FURSTE,A.SCHREIBER,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FORSTER | |
466D | 466D | AB | 28 | 14 | 1.2 | 8-16-99 | synthetic,synthetic | DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX | U.MUELLER,Y.A.MULLER,R.HERBST-IRMER,M.SPRINZL,U.HEINEMANN | 434D 464D Compare |
1WPU | 1WPU | C | 14 | 0 | 1.5 | 8-30-05 | synthetic | CRYSTAL STRUCTURE OF THE HUTP ANTITERMINATION COMPLEX BOUND TO A SINGLE STRANDED REGION OF HUT MRNA | T.S.KUMAREVEL,H.MIZUNO,P.K.R.KUMAR | |
2V7R | 2V7R | AB | 14 | 7 | 1.2 | 3-18-08 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION | C.FOERSTER,M.MANKOWSKA,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN | |
3R1E | 3R1E | AB | 14 | 6 | 1.0 | 6-01-11 | synthetic | CRYSTAL STRUCTURE OF GC(8BRG)GCGGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
2VUQ | 2VUQ | AB | 14 | 7 | 1.2 | 3-10-09 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY ACCEPTOR STEM MICROHELIX (DERIVED FROM THE GENE SEQUENCE DG9990) AT 1.18 ANGSTROEM RESOLUTION | A.EICHERT,M.PERBANDT,A.SCHREIBER,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
1OSU | 1OSU | A | 18 | 6 | 1.4 | 4-04-96 | synthetic | STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU- OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS | M.C.WAHL,S.T.RAO,M.SUNDARALINGAM | |
1J8G | 1J8G | A | 24 | 20 | 0.6 | 11-23-01 | synthetic | X-RAY ANALYSIS OF A RNA TETRAPLEX R(UGGGGU)4 AT ULTRA-HIGH RESOLUTION | J.DENG,Y.XIONG,M.SUNDARALINGAM | |
3G9Y | 3G9Y | C | 6 | 1 | 1.4 | 3-03-09 | synthetic | CRYSTAL STRUCTURE OF THE SECOND ZINC FINGER FROM ZRANB2/ZNF265 BOUND TO 6 NT SSRNA SEQUENCE AGGUAA | F.E.LOUGHLIN,A.P.MCGRATH,M.LEE,J.M.GUSS,J.P.MACKAY | |
2XS2 | 2XS2 | B | 6 | 1 | 1.4 | 10-05-11 | MUS MUSCULUS | CRYSTAL STRUCTURE OF THE RRM DOMAIN OF MOUSE DELETED IN AZOOSPERMIA-LIKE IN COMPLEX WITH RNA, UUGUUCUU | H.T.JENKINS,T.A.EDWARDS | |
4ALP | 4ALP | E | 5 | 0 | 1.5 | 9-05-12 | SYNTHETIC CONSTRUCT | THE LIN28B COLD SHOCK DOMAIN IN COMPLEX WITH HEXAURIDINE | F.MAYR,A.SCHUETZ,N.DOEGE,U.HEINEMANN | |
3JXR | 3JXR | AB | 10 | 4 | 1.2 | 2-09-10 | synthetic | X-RAY STRUCTURE OF R[CGCG(5-FLUORO)CG]2 | D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK,W.RYPNIEWSKI | 3JXQ Compare |
1J6S | 1J6S | A | 20 | 12 | 1.4 | 8-05-03 | synthetic | CRYSTAL STRUCTURE OF AN RNA TETRAPLEX (UGAGGU)4 WITH A- TETRADS, G-TETRADS, U-TETRADS AND G-U OCTADS | B.PAN,Y.XIONG,K.SHI,J.DENG,M.SUNDARALINGAM | |
3PEY | 3PEY | B | 5 | 0 | 1.4 | 3-23-11 | synthetic | S. CEREVISIAE DBP5 BOUND TO RNA AND ADP BEF3 | B.MONTPETIT,N.D.THOMSEN,K.J.HELMKE,M.A.SEELIGER,J.M.BERGER,K.WEIS | 3PEW Compare |
1P79 | 1P79 | A | 20 | 8 | 1.1 | 11-04-03 | synthetic | CRYSTAL STRUCTURE OF A BULGED RNA TETRAPLEX: IMPLICATIONS FOR A NOVEL BINDING SITE IN RNA TETRAPLEX | B.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
3PF4 | 3PF4 | R | 5 | 0 | 1.4 | 9-21-11 | synthetic | CRYSTAL STRUCTURE OF BS-CSPB IN COMPLEX WITH R(GUCUUUA) | R.SACHS,K.E.A.MAX,U.HEINEMANN | |
2GRB | 2GRB | EFGH | 32 | 31 | 1.4 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA QUADRUPLEX CONTAINING INOSINE- TETRAD | B.PAN,K.SHI,M.SUNDARALINGAM | |
3P4B | 3P4B | A | 24 | 0 | 1.4 | 1-05-11 | synthetic | ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RA2U2-P3 | P.S.PALLAN,E.M.GREENE,P.A.JICMAN,R.K.PANDEY,M.MANOHARAN,E.ROZNERS, M.EGLI | |
4E6B | 4E6B | EF | 16 | 8 | 1.5 | 7-11-12 | synthetic,synthetic | CRYSTAL STRUCTURE OF STATISTICALLY DISORDERED 19MER DUPLEX P(CGG) 3C(CUG)3 | L.MALININA,A.POPOV,J.TAMJAR | |
1MDG | 1MDG | A | 20 | 16 | 1.5 | 8-12-03 | synthetic | AN ALTERNATING ANTIPARALLEL OCTAPLEX IN AN RNA CRYSTAL STRUCTURE | B.C.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
2XS7 | 2XS7 | B | 4 | 1 | 1.4 | 10-05-11 | MUS MUSCULUS | CRYSTAL STRUCTURE OF THE RRM DOMAIN OF MOUSE DELETED IN AZOOSPERMIA-LIKE IN COMPLEX WITH SYCP3 RNA, UUGUUU | H.T.JENKINS,T.A.EDWARDS | |
3P4C | 3P4C | A | 8 | 0 | 1.1 | 1-05-11 | synthetic | ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RA2U2-R32 | P.S.PALLAN,E.M.GREENE,P.A.JICMAN,R.K.PANDEY,M.MANOHARAN,E.ROZNERS, M.EGLI | |