#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18AMI|1|B+ 8AMI|1|A (rep)RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with barium ions (model 2)X-ray diffraction1.792022-11-23
28AMG|1|H+ 8AMG|1|GRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-ray diffraction2.262022-11-23
38AMG|1|E+ 8AMG|1|FRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-ray diffraction2.262022-11-23
48AMG|1|A+ 8AMG|1|BRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-ray diffraction2.262022-11-23
58AMG|1|C+ 8AMG|1|DRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-ray diffraction2.262022-11-23
68AMG|1|J+ 8AMG|1|IRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-ray diffraction2.262022-11-23
78AMG|1|K+ 8AMG|1|LRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-ray diffraction2.262022-11-23
88AMJ|1|A+ 8AMJ|1|BRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of unliganded AUGUGGCAU duplexX-ray diffraction2.022022-11-23
98AMN|1|A+ 8AMN|1|BRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
108AMN|1|C+ 8AMN|1|DRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
118AMN|1|E+ 8AMN|1|FRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
128AMN|1|G+ 8AMN|1|HRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
138AMN|1|I+ 8AMN|1|JRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
148AMN|1|K+ 8AMN|1|LRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
158AMN|1|M+ 8AMN|1|NRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
168AMN|1|O+ 8AMN|1|PRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
178AMN|1|Q+ 8AMN|1|RRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
188AMN|1|S+ 8AMN|1|TRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
198AMN|1|U+ 8AMN|1|VRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
208AMN|1|Y+ 8AMN|1|ZRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
218AMN|1|a+ 8AMN|1|bRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23
228AMN|1|c+ 8AMN|1|dRNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')Homo sapiensCrystal structure of AUGUGGCAU duplex with strontium ionsX-ray diffraction2.462022-11-23

Release history

Release3.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.335
Date2022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18AMN|1|a+8AMN|1|bCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
28AMN|1|Y+8AMN|1|ZCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
38AMN|1|c+8AMN|1|dCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
48AMG|1|C+8AMG|1|DCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-RAY DIFFRACTION2.269
58AMN|1|K+8AMN|1|LCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
68AMG|1|E+8AMG|1|FCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-RAY DIFFRACTION2.269
78AMG|1|H+8AMG|1|GCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-RAY DIFFRACTION2.2610
88AMG|1|K+8AMG|1|LCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-RAY DIFFRACTION2.269
98AMG|1|J+8AMG|1|ICrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-RAY DIFFRACTION2.2610
108AMI|1|B+8AMI|1|ACrystal structure of AUGUGGCAU duplex with barium ions (model 2)X-RAY DIFFRACTION1.7910
118AMG|1|A+8AMG|1|BCrystal structure of AUGUGGCAU duplex with barium ions (model 1)X-RAY DIFFRACTION2.269
128AMN|1|C+8AMN|1|DCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
138AMN|1|Q+8AMN|1|RCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
148AMN|1|G+8AMN|1|HCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
158AMN|1|O+8AMN|1|PCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
168AMN|1|U+8AMN|1|VCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
178AMN|1|M+8AMN|1|NCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
188AMN|1|A+8AMN|1|BCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.4610
198AMN|1|I+8AMN|1|JCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
208AMN|1|E+8AMN|1|FCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
218AMJ|1|A+8AMJ|1|BCrystal structure of unliganded AUGUGGCAU duplexX-RAY DIFFRACTION2.029
228AMN|1|S+8AMN|1|TCrystal structure of AUGUGGCAU duplex with strontium ionsX-RAY DIFFRACTION2.469
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