#IFECompound(s)RNA source organismTitleMethodResolutionDate
17TZS|1|X (rep)RNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)X-RAY DIFFRACTION2.212022-05-25
22GDI|1|XTPP riboswitchCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.052006-07-04
32GDI|1|YTPP riboswitchCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.052006-07-04
47TZS|1|YRNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)X-RAY DIFFRACTION2.212022-05-25
57TDA|1|AthiM TPP riboswitch RNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.252022-02-16
62HOJ|1|Athi-box riboswitchCrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.52006-09-19
77TDC|1|AthiM riboswitch RNA (83-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ionsX-RAY DIFFRACTION2.462022-02-16

Release history

Release3.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.249
Date2022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-21

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_42241.3NR_2.5_42241.23.232(5) 7TDC|1|A, 7TDA|1|A, 2HOJ|1|A, 2GDI|1|Y, 2GDI|1|X(2) 7TZS|1|Y, 7TZS|1|X(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12HOJ|1|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.578
27TDA|1|ACrystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.2579
37TDC|1|ACrystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ionsX-RAY DIFFRACTION2.4679
42GDI|1|XCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.0578
57TZS|1|XCrystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)X-RAY DIFFRACTION2.2178
67TZS|1|YCrystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)X-RAY DIFFRACTION2.2178
72GDI|1|YCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.0578