Equivalence class NR_2.5_56726.74 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4YBB|1|AA (rep) | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
| 2 | 4YBB|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
| 3 | 7K00|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 2020-09-23 |
| 4 | 7N1P|1|16 | Small subunit ribosomal RNA | 16S rRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00177 | Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation | Electron microscopy | 2.33 | 2021-07-14 |
| 5 | 7O1A|1|AA | Small subunit ribosomal RNA | Ribosomal RNA 16S | Escherichia coli K-12 | Bacteria | RF00177 | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan | Electron microscopy | 2.4 | 2021-09-01 |
| 6 | 7PJS|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C) | Electron microscopy | 2.35 | 2021-10-20 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7O1A|1|AA | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan | ELECTRON MICROSCOPY | 2.4 | 1523 |
| 2 | 7N1P|1|16 | Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation | ELECTRON MICROSCOPY | 2.33 | 1531 |
| 3 | 7K00|1|A | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 1508 |
| 4 | 7PJS|1|a | Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C) | ELECTRON MICROSCOPY | 2.35 | 660 |
| 5 | 4YBB|1|AA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 1523 |
| 6 | 4YBB|1|BA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 1522 |