Equivalence class NR_2.5_83717.57 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4YBB|1|DA (rep) | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2897 | 2015-03-18 |
| 2 | 4YBB|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2898 | 2015-03-18 |
| 3 | 6PJ6|1|I | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High resolution cryo-EM structure of E.coli 50S | Electron microscopy | 2.2 | 2898 | 2020-01-22 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_2.5_83717.57 | NR_2.5_83717.56 | 3.110 | (2) 4YBB|1|CA, 4YBB|1|DA | (1) 6PJ6|1|I | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_2.5_83717.57 | NR_2.5_83717.58 | 3.125 | (3) 4YBB|1|CA, 4YBB|1|DA, 6PJ6|1|I | (0) | (0) |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 6PJ6|1|I | High resolution cryo-EM structure of E.coli 50S | ELECTRON MICROSCOPY | 2.2 | 2898 | |
| 2 | 4YBB|1|CA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2898 | |
| 3 | 4YBB|1|DA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2897 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: