#IFECompound(s)RNA source organismTitleMethodResolutionDate
13UCZ|1|R (rep)RNA (92-MER), RNA (5'-R(*GP*G)-3')The c-di-GMP-I riboswitch bound to GpGX-RAY DIFFRACTION2.82012-01-04
23UCU|1|RRNA (92-MER), diguanosine monophosphateThe c-di-GMP-I riboswitch bound to pGpGX-RAY DIFFRACTION2.82012-01-04
33MXH|1|Rc-di-GMP riboswitchNative structure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.32010-08-25
43MUR|1|RC92U mutant c-di-GMP riboswitchCrystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION32010-08-25
54YB1|1|RRNA (91-MER)Vibrio cholerae20A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMPX-RAY DIFFRACTION2.082015-04-15
63UD4|1|RRNA (92-MER), RNA (5'-R(*GP*A)-3')The C92U mutant c-di-GMP-I riboswitch bound to GpAX-RAY DIFFRACTION2.72012-01-04
73MUM|1|RG20A mutant c-di-GMP RiboswitchCrystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION2.92010-08-25
83IRW|1|Rc-di-GMP RiboswitchVibrio choleraeStructure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.72009-11-10
93MUT|1|RG20A/C92U mutant c-di-GMP riboswitchCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION32010-08-25

Release history

Release2.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.100
Date2016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_12260.3NR_3.0_12260.22.93(9) 3IRW|1|R, 3MUM|1|R, 3MUR|1|R, 3MUT|1|R, 3MXH|1|R, 3UCU|1|R, 3UCZ|1|R, 3UD4|1|R, 4YB1|1|R(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13MXH|1|RNative structure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.391
23MUM|1|RCrystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION2.991
33MUT|1|RCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION391
43MUR|1|RCrystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION391
53UCZ|1|RThe c-di-GMP-I riboswitch bound to GpGX-RAY DIFFRACTION2.891
63UCU|1|RThe c-di-GMP-I riboswitch bound to pGpGX-RAY DIFFRACTION2.891
73UD4|1|RThe C92U mutant c-di-GMP-I riboswitch bound to GpAX-RAY DIFFRACTION2.791
83IRW|1|RStructure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.790
94YB1|1|R20A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMPX-RAY DIFFRACTION2.0891