NR_3.0_12914.2

Members (68)
History
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#	IFE	Standardized name	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	1FFK\|0 (rep)	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION	X-ray diffraction	2.4	2000-08-14
2	1FFZ\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH R(CC)-DA-PUROMYCIN	X-ray diffraction	3.2	2000-08-28
3	1FG0\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND	X-ray diffraction	3	2000-08-28
4	1JJ2\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Fully Refined Crystal Structure of the Haloarcula marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution	X-ray diffraction	2.4	2001-08-01
5	1K73\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit	X-ray diffraction	3.01	2003-07-22
6	1K8A\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of Carbomycin A bound to the 50S ribosomal subunit of Haloarcula marismortui	X-ray diffraction	3	2002-07-19
7	1K9M\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui	X-ray diffraction	3	2002-07-19
8	1KC8\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit	X-ray diffraction	3.01	2003-07-22
9	1KD1\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui	X-ray diffraction	3	2002-07-19
10	1KQS\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis	X-ray diffraction	3.1	2002-02-22
11	1M1K\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui	X-ray diffraction	3.2	2002-07-19
12	1M90\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit	X-ray diffraction	2.8	2002-09-06
13	1N8R\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of large ribosomal subunit in complex with virginiamycin M	X-ray diffraction	3	2003-07-22
14	1NJI\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of chloramphenicol bound to the 50S ribosomal subunit	X-ray diffraction	3	2003-07-22
15	1Q7Y\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit	X-ray diffraction	3.2	2003-10-07
16	1Q81\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure of minihelix with 3' puromycin bound to A-site of the 50S ribosomal subunit.	X-ray diffraction	2.95	2003-10-07
17	1Q82\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit	X-ray diffraction	2.98	2003-10-07
18	1Q86\|A	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.	X-ray diffraction	3	2003-10-07
19	1QVF\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	3.1	2003-11-11
20	1QVG\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	2.9	2003-11-11
21	1S72\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION	X-ray diffraction	2.4	2004-06-15
22	1VQ4\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of the transition state analogue 'DAA' bound to the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	2.7	2005-11-29
23	1VQ5\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of the transition state analogue 'RAA' bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.6	2005-11-29
24	1VQ6\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of c-hpmn and CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.7	2005-11-29
25	1VQ7\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of the transition state analogue 'DCA' bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.5	2005-11-29
26	1VQ8\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of CCDA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.2	2005-11-29
27	1VQ9\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.4	2005-11-29
28	1VQK\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of CCDA-PHE-CAP-BIO bound to the a site of the ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.3	2005-11-29
29	1VQL\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of the transition state analogue 'DCSN' bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.3	2005-11-29
30	1VQM\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of the transition state analogue 'DAN' bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.3	2005-11-29
31	1VQN\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.4	2005-11-29
32	1VQO\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui	X-ray diffraction	2.2	2005-11-29
33	1VQP\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of the transition state analogue 'RAP' bound to the large ribosomal subunit of haloarcula marismortui	X-ray diffraction	2.25	2005-11-29
34	1W2B\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Trigger Factor ribosome binding domain in complex with 50S	X-ray diffraction	3.5	2004-09-02
35	1YHQ\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure Of Azithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui	X-ray diffraction	2.4	2005-04-26
36	1YI2\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure Of Erythromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui	X-ray diffraction	2.65	2005-04-26
37	1YIJ\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure Of Telithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui	X-ray diffraction	2.6	2005-04-26
38	1YIT\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure Of Virginiamycin M and S Bound To The 50S Ribosomal Subunit Of Haloarcula Marismortui	X-ray diffraction	2.8	2005-04-26
39	1YJ9\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22	X-ray diffraction	2.8	2005-04-26
40	1YJN\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui	X-ray diffraction	3	2005-04-26
41	1YJW\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui	X-ray diffraction	2.9	2005-04-26
42	2OTJ\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	13-deoxytedanolide bound to the large subunit of Haloarcula marismortui	X-ray diffraction	2.9	2007-04-03
43	2OTL\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Girodazole bound to the large subunit of Haloarcula marismortui	X-ray diffraction	2.7	2007-04-03
44	2QA4\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit	X-ray diffraction	3	2008-04-01
45	2QEX\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit	X-ray diffraction	2.9	2008-09-30
46	3CC2\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins	X-ray diffraction	2.4	2008-05-20
47	3CC4\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit	X-ray diffraction	2.7	2008-05-20
48	3CC7\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U	X-ray diffraction	2.7	2008-05-20
49	3CCE\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A	X-ray diffraction	2.75	2008-05-20
50	3CCJ\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U	X-ray diffraction	3.3	2008-05-20
51	3CCL\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model.	X-ray diffraction	2.9	2008-05-20
52	3CCM\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U	X-ray diffraction	2.55	2008-05-20
53	3CCQ\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U	X-ray diffraction	2.9	2008-05-20
54	3CCR\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.	X-ray diffraction	3	2008-05-20
55	3CCS\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A	X-ray diffraction	2.95	2008-05-20
56	3CCU\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C	X-ray diffraction	2.8	2008-05-20
57	3CCV\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A	X-ray diffraction	2.9	2008-05-20
58	3CD6\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin	X-ray diffraction	2.75	2008-05-20
59	3CMA\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	2.8	2008-09-23
60	3CME\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui	X-ray diffraction	2.95	2008-09-23
61	3CPW\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI	X-ray diffraction	2.7	2008-07-22
62	3CXC\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui	X-ray diffraction	3	2009-04-28
63	3G4S\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of Tiamulin bound to the large ribosomal subunit	X-ray diffraction	3.2	2009-04-28
64	3G6E\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit	X-ray diffraction	2.7	2009-04-28
65	3G71\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of Bruceantin bound to the large ribosomal subunit	X-ray diffraction	2.85	2009-04-28
66	3I55\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit	X-ray diffraction	3.11	2010-03-09
67	3I56\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit	X-ray diffraction	2.9	2010-03-09
68	3OW2\|0	Large subunit ribosomal RNA	Haloarcula marismortui	Archaea	RF02540	Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit	X-ray diffraction	2.7	2012-06-20

Release history

Release	0.75	0.76	0.77	0.78	0.79	0.80	0.81	0.82	0.83	0.84	0.85	0.86	0.87	0.88	0.89	0.90	0.91	0.92	0.93	0.94	0.95	0.96	0.97	0.98	0.99	0.100	0.101	0.102	0.103	0.104	0.105	0.106	0.107	0.108	0.109	0.110	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12
Date	2012-06-23	2012-06-30	2012-07-07	2012-07-14	2012-07-21	2012-07-28	2012-08-04	2012-08-11	2012-08-18	2012-08-25	2012-09-01	2012-09-08	2012-09-15	2012-09-22	2012-09-29	2012-10-06	2012-10-13	2012-10-20	2012-10-27	2012-11-03	2012-11-10	2012-11-17	2012-11-24	2012-12-01	2012-12-08	2012-12-15	2012-12-22	2012-12-29	2013-01-05	2013-01-12	2013-01-19	2013-01-26	2013-02-02	2013-02-09	2013-02-16	2013-02-23	2013-03-02	2013-03-09	2013-03-16	2013-03-23	2013-03-30	2013-04-06	2013-04-13	2013-04-20	2013-04-27	2013-05-04	2013-05-11	2013-05-18	2013-05-25

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	View	PDB	Title	Method	Resolution	Length

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_12914.2 Obsolete

Release history

Parents

Children