Equivalence class NR_3.0_56726.7 Obsolete
# | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
---|---|---|---|---|---|---|---|
1 | 4V9P|1|FA (rep) | 16S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
2 | 4YBB|1|AA | 16S rRNA | Escherichia coli | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2015-03-18 |
3 | 4V9O|1|FA | 16S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
4 | 4U1U|1|CA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2014-07-30 |
5 | 4V9O|1|BA | 16S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
6 | 5AFI|1|a | 16S ribosomal RNA | Escherichia coli | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | ELECTRON MICROSCOPY | 2.9 | 2015-03-11 |
7 | 4U20|1|AA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
8 | 4V9P|1|BA | 16S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
9 | 4U1U|1|AA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2014-07-30 |
10 | 4U26|1|AA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2014-07-30 |
11 | 4U24|1|AA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
12 | 4YBB|1|BA | 16S rRNA | Escherichia coli | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2015-03-18 |
13 | 4U20|1|CA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
14 | 4U27|1|AA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2014-07-30 |
15 | 4V9P|1|HA | 16S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
16 | 4U25|1|AA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
17 | 4V9O|1|DA | 16S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
18 | 4U1V|1|CA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2014-07-30 |
19 | 4WOI|1|DA | 16S ribosomal RNA, Messenger RNA | Escherichia coli | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 2015-08-05 |
20 | 4V9P|1|DA | 16S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
21 | 4V9D|1|BA | 16S rRNA, messenger RNA | Escherichia coli | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2014-07-09 |
22 | 4U27|1|CA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2014-07-30 |
23 | 4U1V|1|AA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2014-07-30 |
24 | 4V9D|1|AA | 16S rRNA, messenger RNA | Escherichia coli | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2014-07-09 |
25 | 4U25|1|CA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
26 | 4WOI|1|AA | 16S ribosomal RNA, Messenger RNA | Escherichia coli | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 2015-08-05 |
27 | 4U26|1|CA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2014-07-30 |
28 | 4U24|1|CA | 16S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
29 | 4V9O|1|HA | 16S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
Release history
Release | 2.35 | 2.36 | 2.37 | 2.38 | 2.39 | 2.40 | 2.41 | 2.42 | 2.43 | 2.44 | 2.45 | 2.46 | 2.47 | 2.48 | 2.49 | 2.50 | 2.51 | 2.52 | 2.53 | 2.54 | 2.55 | 2.56 | 2.57 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2015-08-07 | 2015-08-14 | 2015-08-21 | 2015-08-28 | 2015-09-04 | 2015-09-11 | 2015-09-18 | 2015-09-25 | 2015-10-02 | 2015-10-09 | 2015-10-16 | 2015-10-23 | 2015-10-30 | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 | 2015-12-04 | 2015-12-11 | 2015-12-18 | 2015-12-25 | 2016-01-01 | 2016-01-08 |
Parents
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 4V9P|1|FA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 |
2 | 4V9P|1|HA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 |
3 | 4V9O|1|HA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 |
4 | 4YBB|1|AA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 1523 |
5 | 4U24|1|AA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 1538 |
6 | 4U26|1|AA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 1538 |
7 | 4U25|1|AA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 1538 |
8 | 4U27|1|AA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 1538 |
9 | 4U1V|1|AA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 1538 |
10 | 4U20|1|AA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 1538 |
11 | 4U1U|1|AA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 1538 |
12 | 4V9P|1|BA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 |
13 | 4V9P|1|DA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 |
14 | 4V9O|1|DA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 |
15 | 4V9O|1|BA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 |
16 | 4V9O|1|FA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 |
17 | 4V9D|1|AA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 1538 |
18 | 4YBB|1|BA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 1522 |
19 | 4U24|1|CA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 1539 |
20 | 4U26|1|CA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 1539 |
21 | 4U25|1|CA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 1539 |
22 | 4U27|1|CA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 1539 |
23 | 4U1V|1|CA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 1539 |
24 | 4U20|1|CA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 1539 |
25 | 4U1U|1|CA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 1539 |
26 | 4V9D|1|BA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 1539 |
27 | 5AFI|1|a | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | ELECTRON MICROSCOPY | 2.9 | 1528 |
28 | 4WOI|1|DA | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 1539 |
29 | 4WOI|1|AA | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 1538 |