BGSU RNA Site //

Equivalence class NR_3.5_08692.3 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
13G9C|1|Q (rep)glmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.92009-11-03
22NZ4|1|QglmS glucosamine-6-phosphate activated ribozymeGlmS ribozyme, substrate strand RNA 13-merRF00234Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.52007-01-16
33G9C|1|RglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.92009-11-03
42NZ4|1|RglmS glucosamine-6-phosphate activated ribozymeGlmS ribozyme, substrate strand RNA 13-merRF00234Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.52007-01-16
53G9C|1|SglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.92009-11-03
62NZ4|1|PglmS glucosamine-6-phosphate activated ribozymeGlmS ribozyme, substrate strand RNA 13-merRF00234Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.52007-01-16
73G96|1|RglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.012009-11-03
83G8S|1|QglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.12009-11-03
92NZ4|1|SglmS glucosamine-6-phosphate activated ribozymeGlmS ribozyme, substrate strand RNA 13-merRF00234Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.52007-01-16
103G9C|1|PglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.92009-11-03
113G96|1|QglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.012009-11-03
123G8S|1|RglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.12009-11-03
133L3C|1|QglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.852009-12-29
143L3C|1|RglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.852009-12-29
153G96|1|PglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.012009-11-03
163G96|1|SglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.012009-11-03
173L3C|1|PglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.852009-12-29
183G8S|1|PglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.12009-11-03
193L3C|1|SglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.852009-12-29
203G8S|1|SglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.12009-11-03
213G8T|1|RglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction32009-11-03
223G8T|1|QglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction32009-11-03
233G8T|1|PglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction32009-11-03
243G8T|1|SglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction32009-11-03

Release history

Release3.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.281
Date2020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-03

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_08692.3NR_3.5_08692.23.151(24) 3G8S|1|Q, 3G96|1|Q, 3L3C|1|Q, 2NZ4|1|S, 3G8T|1|S, 3G9C|1|S, 2NZ4|1|R, 3G8T|1|R, 3G9C|1|R, 2NZ4|1|Q, 3G8T|1|Q, 3G9C|1|Q, 2NZ4|1|P, 3G8T|1|P, 3G9C|1|P, 3L3C|1|R, 3G8S|1|R, 3G96|1|R, 3G8S|1|P, 3G96|1|P, 3L3C|1|P, 3L3C|1|S, 3G8S|1|S, 3G96|1|S(0) (4) 3G95|1|P, 3G95|1|S, 3G95|1|R, 3G95|1|Q

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13G8T|1|PCrystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3140
23G9C|1|PCrystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9139
33G9C|1|SCrystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9139
43G9C|1|QCrystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9140
53G8S|1|QCrystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1140
63G8S|1|RCrystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1140
73G9C|1|RCrystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9140
82NZ4|1|QStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5140
93G96|1|QCrystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01140
103L3C|1|QCrystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85140
113L3C|1|RCrystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85140
122NZ4|1|RStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5140
133G96|1|RCrystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01140
142NZ4|1|SStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5140
153L3C|1|SCrystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85140
162NZ4|1|PStructural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5140
173L3C|1|PCrystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85140
183G96|1|PCrystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01140
193G8S|1|SCrystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1140
203G96|1|SCrystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01140
213G8S|1|PCrystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1140
223G8T|1|SCrystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3140
233G8T|1|QCrystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3140
243G8T|1|RCrystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3140
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