Equivalence class NR_3.5_31819.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1QRS|1|B (rep) | Transfer RNA | TRNAGLN2 | Escherichia coli | Bacteria | RF00005 | GLUTAMINYL-TRNA SYNTHETASE MUTANT D235N COMPLEXED WITH GLUTAMINE TRANSFER RNA | X-ray diffraction | 2.6 | 1996-12-07 |
| 2 | 1O0C|1|B | Transfer RNA | Glutaminyl tRNA | RF00005 | CRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | X-ray diffraction | 2.7 | 2003-04-15 | ||
| 3 | 1QTQ|1|B | Transfer RNA | RNA (TRNA GLN II ) | Escherichia coli | Bacteria | RF00005 | GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA AND AN AMINO ACID ANALOG | X-ray diffraction | 2.25 | 1998-05-27 |
| 4 | 1QRT|1|B | Transfer RNA | TRNAGLN2 | Escherichia coli | Bacteria | RF00005 | GLUTAMINYL-TRNA SYNTHETASE MUTANT D235G COMPLEXED WITH GLUTAMINE TRANSFER RNA | X-ray diffraction | 2.7 | 1996-12-07 |
| 5 | 1GTR|1|B | Transfer RNA | RNA (74-MER) | RF00005 | STRUCTURAL BASIS OF ANTICODON LOOP RECOGNITION BY GLUTAMINYL-TRNA SYNTHETASE | X-ray diffraction | 2.5 | 1995-02-07 | ||
| 6 | 1GTS|1|B | Transfer RNA | TRNAGLN | Escherichia coli | Bacteria | RF00005 | STRUCTURAL BASIS FOR TRANSFER RNA AMINOACEYLATION BY ESCHERICHIA COLI GLUTAMINYL-TRNA SYNTHETASE | X-ray diffraction | 2.8 | 1995-02-07 |
| 7 | 1QRU|1|B | Transfer RNA | TRNAGLN2 | Escherichia coli | Bacteria | RF00005 | GLUTAMINYL-TRNA SYNTHETASE MUTANT I129T COMPLEXED WITH GLUTAMINE TRANSFER RNA | X-ray diffraction | 3 | 1996-12-07 |
| 8 | 1O0B|1|B | Transfer RNA | Glutaminyl tRNA | RF00005 | CRYSTAL STRUCTURE OF L-GLUTAMINE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | X-ray diffraction | 2.7 | 2003-04-15 | ||
| 9 | 1EUY|1|B | Transfer RNA | GLUTAMINYL TRNA | RF00005 | GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA MUTANT AND AN ACTIVE SITE INHIBITOR | X-ray diffraction | 2.6 | 2000-06-04 | ||
| 10 | 4JXX|1|B | Transfer RNA | RNA (71-MER) | RF00005 | Crystal structure of E coli E. coli glutaminyl-tRNA synthetase bound to tRNA(Gln)(CUG) and ATP from novel cryostabilization conditions | X-ray diffraction | 2.3 | 2013-05-01 | ||
| 11 | 1EXD|1|B | Transfer RNA | GLUTAMINE TRNA APTAMER | RF00005 | CRYSTAL STRUCTURE OF A TIGHT-BINDING GLUTAMINE TRNA BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | X-ray diffraction | 2.7 | 2000-05-15 | ||
| 12 | 2RE8|1|B | Transfer RNA | Glutamine tRNA | RF00005 | Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMYL)-SULFAMOYL]ADENOSINE | X-ray diffraction | 2.6 | 2008-01-15 | ||
| 13 | 5NWY|1|M | Transfer RNA | Gln-tRNA, mRNA | Escherichia coli | Bacteria | RF00005 | 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex | Electron microscopy | 2.9 | 2017-07-19 |
| 14 | 2RD2|1|B | Transfer RNA | Glutamine tRNA | RF00005 | Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMINYL)-SULFAMOYL]ADENOSINE | X-ray diffraction | 2.6 | 2008-01-15 | ||
| 15 | 1ZJW|1|B | Transfer RNA | Glutaminyl-tRNA | RF00005 | Glutaminyl-tRNA synthetase complexed to glutamine and 2'deoxy A76 glutamine tRNA | X-ray diffraction | 2.5 | 2005-06-07 | ||
| 16 | 4V7L|1|AW | Transfer RNA | tRNA-Gln, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
| 17 | 1EUQ|1|B | Transfer RNA | GLUTAMINYL TRNA | RF00005 | CRYSTAL STRUCTURE OF GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA-GLN MUTANT AND AN ACTIVE-SITE INHIBITOR | X-ray diffraction | 3.1 | 2000-06-04 | ||
| 18 | 4V7M|1|AW | Transfer RNA | tRNA-Gln, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of Capreomycin bound to the 70S ribosome. | X-ray diffraction | 3.45 | 2014-07-09 |
| 19 | 4V7M|1|CW | Transfer RNA | tRNA-Gln, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of Capreomycin bound to the 70S ribosome. | X-ray diffraction | 3.45 | 2014-07-09 |
| 20 | 4V7L|1|CW | Transfer RNA | tRNA-Gln, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
| 21 | 4V7L|1|CY | Transfer RNA | tRNA-Gln | Escherichia coli | Bacteria | RF00005 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
| 22 | 4V7L|1|AY | Transfer RNA | tRNA-Gln | Escherichia coli | Bacteria | RF00005 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
| 23 | 1GSG|1|T | Transfer RNA | TRNAGLN | RF00005 | Structure of E.coli glutaminyl-tRNA synthetase complexed with trnagln and ATP at 2.8 Angstroms resolution | X-ray diffraction | 2.8 | 1992-02-24 |
Release history
| Release | 2.138 | 2.139 | 2.140 | 2.141 | 2.142 | 2.143 | 2.144 | 2.145 | 2.146 | 2.147 | 2.148 | 2.149 | 2.150 | 2.151 | 2.152 | 2.153 | 2.154 | 2.155 | 2.156 | 2.157 | 2.158 | 3.0 | 3.1 | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 3.100 | 3.101 | 3.102 | 3.103 | 3.104 | 3.105 | 3.106 | 3.107 | 3.108 | 3.109 | 3.110 | 3.111 | 3.112 | 3.113 | 3.114 | 3.115 | 3.116 | 3.117 | 3.118 | 3.119 | 3.120 | 3.121 | 3.122 | 3.123 | 3.124 | 3.125 | 3.126 | 3.127 | 3.128 | 3.129 | 3.130 | 3.131 | 3.132 | 3.133 | 3.134 | 3.135 | 3.136 | 3.137 | 3.138 | 3.139 | 3.140 | 3.141 | 3.142 | 3.143 | 3.144 | 3.145 | 3.146 | 3.147 | 3.148 | 3.149 | 3.150 | 3.151 | 3.152 | 3.153 | 3.154 | 3.155 | 3.156 | 3.157 | 3.158 | 3.159 | 3.160 | 3.161 | 3.162 | 3.163 | 3.164 | 3.165 | 3.166 | 3.167 | 3.168 | 3.169 | 3.170 | 3.171 | 3.172 | 3.173 | 3.174 | 3.175 | 3.176 | 3.177 | 3.178 | 3.179 | 3.180 | 3.181 | 3.182 | 3.183 | 3.184 | 3.185 | 3.186 | 3.187 | 3.188 | 3.189 | 3.190 | 3.191 | 3.192 | 3.193 | 3.194 | 3.195 | 3.196 | 3.197 | 3.198 | 3.199 | 3.200 | 3.201 | 3.202 | 3.203 | 3.204 | 3.205 | 3.206 | 3.207 | 3.208 | 3.209 | 3.210 | 3.211 | 3.212 | 3.213 | 3.214 | 3.215 | 3.216 | 3.217 | 3.218 | 3.219 | 3.220 | 3.221 |
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| Date | 2017-07-26 | 2017-07-31 | 2017-08-05 | 2017-08-12 | 2017-08-19 | 2017-08-26 | 2017-09-03 | 2017-09-09 | 2017-09-16 | 2017-09-23 | 2017-09-30 | 2017-10-07 | 2017-10-14 | 2017-10-21 | 2017-10-28 | 2017-11-03 | 2017-11-10 | 2017-11-17 | 2017-11-24 | 2017-12-01 | 2017-12-08 | 2017-12-15 | 2017-12-22 | 2017-12-29 | 2018-01-05 | 2018-01-12 | 2018-01-19 | 2018-01-26 | 2018-02-02 | 2018-02-09 | 2018-02-16 | 2018-02-23 | 2018-03-01 | 2018-03-08 | 2018-03-15 | 2018-03-22 | 2018-03-29 | 2018-04-06 | 2018-04-13 | 2018-04-20 | 2018-04-27 | 2018-05-04 | 2018-05-11 | 2018-05-18 | 2018-05-25 | 2018-06-01 | 2018-06-08 | 2018-06-15 | 2018-06-22 | 2018-06-29 | 2018-07-06 | 2018-07-13 | 2018-07-20 | 2018-07-27 | 2018-08-03 | 2018-08-10 | 2018-08-17 | 2018-08-24 | 2018-08-31 | 2018-09-07 | 2018-09-14 | 2018-09-21 | 2018-09-28 | 2018-10-05 | 2018-10-12 | 2018-10-19 | 2018-10-26 | 2018-11-02 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-07 | 2018-12-14 | 2018-12-21 | 2018-12-28 | 2019-01-04 | 2019-01-11 | 2019-01-18 | 2019-01-25 | 2019-02-01 | 2019-02-08 | 2019-02-15 | 2019-02-22 | 2019-03-01 | 2019-03-08 | 2019-03-15 | 2019-03-22 | 2019-03-29 | 2019-04-05 | 2019-04-12 | 2019-04-19 | 2019-04-26 | 2019-05-03 | 2019-05-10 | 2019-05-17 | 2019-05-24 | 2019-05-31 | 2019-06-07 | 2019-06-14 | 2019-06-21 | 2019-06-28 | 2019-07-05 | 2019-07-12 | 2019-07-19 | 2019-07-26 | 2019-08-02 | 2019-08-09 | 2019-08-16 | 2019-08-23 | 2019-08-28 | 2019-09-04 | 2019-09-11 | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 | 2019-10-30 | 2019-11-06 | 2019-11-13 | 2019-11-20 | 2019-11-27 | 2019-12-04 | 2019-12-11 | 2019-12-18 | 2019-12-25 | 2020-01-01 | 2020-01-08 | 2020-01-15 | 2020-01-22 | 2020-01-29 | 2020-02-05 | 2020-02-12 | 2020-02-19 | 2020-02-26 | 2020-03-04 | 2020-03-11 | 2020-03-18 | 2020-03-25 | 2020-04-01 | 2020-04-08 | 2020-04-15 | 2020-04-22 | 2020-04-29 | 2020-05-06 | 2020-05-13 | 2020-05-20 | 2020-05-27 | 2020-06-03 | 2020-06-10 | 2020-06-17 | 2020-06-24 | 2020-07-01 | 2020-07-08 | 2020-07-15 | 2020-07-22 | 2020-07-29 | 2020-08-05 | 2020-08-12 | 2020-08-19 | 2020-08-26 | 2020-09-02 | 2020-09-09 | 2020-09-16 | 2020-09-23 | 2020-09-30 | 2020-10-07 | 2020-10-14 | 2020-10-21 | 2020-10-28 | 2020-11-04 | 2020-11-11 | 2020-11-18 | 2020-11-25 | 2020-12-02 | 2020-12-09 | 2020-12-16 | 2020-12-23 | 2020-12-30 | 2021-01-06 | 2021-01-13 | 2021-01-20 | 2021-01-27 | 2021-02-03 | 2021-02-10 | 2021-02-17 | 2021-02-24 | 2021-03-03 | 2021-03-10 | 2021-03-17 | 2021-03-24 | 2021-03-31 | 2021-04-07 | 2021-04-14 | 2021-04-21 | 2021-04-28 | 2021-05-05 | 2021-05-12 | 2021-05-19 | 2021-05-26 | 2021-06-02 | 2021-06-09 | 2021-06-16 | 2021-06-23 | 2021-06-30 | 2021-07-07 | 2021-07-14 | 2021-07-21 | 2021-07-28 | 2021-08-04 | 2021-08-11 | 2021-08-18 | 2021-08-25 | 2021-09-01 | 2021-09-08 | 2021-09-15 | 2021-09-22 | 2021-09-29 | 2021-10-06 | 2021-10-13 | 2021-10-20 | 2021-10-27 | 2021-11-03 | 2021-11-10 | 2021-11-17 | 2021-11-24 | 2021-12-01 | 2021-12-08 | 2021-12-15 | 2021-12-22 | 2021-12-29 | 2022-01-05 | 2022-01-12 | 2022-01-19 | 2022-01-26 | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 | 2022-03-02 | 2022-03-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_31819.2 | NR_3.5_31819.1 | 2.138 | (22) 1EUQ|1|B, 4V7M|1|CW, 4V7M|1|AW, 4V7L|1|CY, 4V7L|1|CW, 4V7L|1|AY, 4V7L|1|AW, 4JXX|1|B, 2RE8|1|B, 2RD2|1|B, 1ZJW|1|B, 1QTQ|1|B, 1QRU|1|B, 1QRT|1|B, 1QRS|1|B, 1O0C|1|B, 1O0B|1|B, 1GTS|1|B, 1GTR|1|B, 1GSG|1|T, 1EXD|1|B, 1EUY|1|B | (1) 5NWY|1|M | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.5_31819.2 | NR_3.5_31819.3 | 3.222 | (23) 1EUQ|1|B, 2RD2|1|B, 2RE8|1|B, 4JXX|1|B, 4V7L|1|AW, 4V7L|1|AY, 4V7L|1|CW, 4V7L|1|CY, 4V7M|1|AW, 4V7M|1|CW, 1ZJW|1|B, 1QTQ|1|B, 1QRU|1|B, 1EUY|1|B, 1EXD|1|B, 1GSG|1|T, 1GTR|1|B, 1GTS|1|B, 1O0B|1|B, 1O0C|1|B, 1QRS|1|B, 1QRT|1|B, 5NWY|1|M | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 1EXD|1|B | CRYSTAL STRUCTURE OF A TIGHT-BINDING GLUTAMINE TRNA BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | X-RAY DIFFRACTION | 2.7 | 73 |
| 2 | 1EUQ|1|B | CRYSTAL STRUCTURE OF GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA-GLN MUTANT AND AN ACTIVE-SITE INHIBITOR | X-RAY DIFFRACTION | 3.1 | 72 |
| 3 | 1EUY|1|B | GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA MUTANT AND AN ACTIVE SITE INHIBITOR | X-RAY DIFFRACTION | 2.6 | 73 |
| 4 | 4JXX|1|B | Crystal structure of E coli E. coli glutaminyl-tRNA synthetase bound to tRNA(Gln)(CUG) and ATP from novel cryostabilization conditions | X-RAY DIFFRACTION | 2.3 | 71 |
| 5 | 1GTR|1|B | STRUCTURAL BASIS OF ANTICODON LOOP RECOGNITION BY GLUTAMINYL-TRNA SYNTHETASE | X-RAY DIFFRACTION | 2.5 | 74 |
| 6 | 1GTS|1|B | STRUCTURAL BASIS FOR TRANSFER RNA AMINOACEYLATION BY ESCHERICHIA COLI GLUTAMINYL-TRNA SYNTHETASE | X-RAY DIFFRACTION | 2.8 | 74 |
| 7 | 1QRU|1|B | GLUTAMINYL-TRNA SYNTHETASE MUTANT I129T COMPLEXED WITH GLUTAMINE TRANSFER RNA | X-RAY DIFFRACTION | 3 | 74 |
| 8 | 1QRT|1|B | GLUTAMINYL-TRNA SYNTHETASE MUTANT D235G COMPLEXED WITH GLUTAMINE TRANSFER RNA | X-RAY DIFFRACTION | 2.7 | 74 |
| 9 | 1QRS|1|B | GLUTAMINYL-TRNA SYNTHETASE MUTANT D235N COMPLEXED WITH GLUTAMINE TRANSFER RNA | X-RAY DIFFRACTION | 2.6 | 74 |
| 10 | 1QTQ|1|B | GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA AND AN AMINO ACID ANALOG | X-RAY DIFFRACTION | 2.25 | 74 |
| 11 | 1O0C|1|B | CRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | X-RAY DIFFRACTION | 2.7 | 74 |
| 12 | 1O0B|1|B | CRYSTAL STRUCTURE OF L-GLUTAMINE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | X-RAY DIFFRACTION | 2.7 | 74 |
| 13 | 1ZJW|1|B | Glutaminyl-tRNA synthetase complexed to glutamine and 2'deoxy A76 glutamine tRNA | X-RAY DIFFRACTION | 2.5 | 74 |
| 14 | 2RE8|1|B | Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMYL)-SULFAMOYL]ADENOSINE | X-RAY DIFFRACTION | 2.6 | 74 |
| 15 | 2RD2|1|B | Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMINYL)-SULFAMOYL]ADENOSINE | X-RAY DIFFRACTION | 2.6 | 74 |
| 16 | 4V7M|1|CW | The structures of Capreomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3.45 | 74 |
| 17 | 4V7L|1|AW | The structures of viomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3 | 75 |
| 18 | 4V7M|1|AW | The structures of Capreomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3.45 | 74 |
| 19 | 4V7L|1|CW | The structures of viomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3 | 75 |
| 20 | 5NWY|1|M | 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex | ELECTRON MICROSCOPY | 2.9 | 75 |
| 21 | 4V7L|1|CY | The structures of viomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3 | 75 |
| 22 | 4V7L|1|AY | The structures of viomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3 | 75 |
| 23 | 1GSG|1|T | Structure of E.coli glutaminyl-tRNA synthetase complexed with trnagln and ATP at 2.8 Angstroms resolution | X-RAY DIFFRACTION | 2.8 | 66 |