Equivalence class NR_3.5_64115.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5O60|1|A (rep) | Large subunit ribosomal RNA | 23S rRNA, tRNA CCA-end acetylated (Phe) | Mycolicibacterium smegmatis | Bacteria | RF02541 | Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis | Electron microscopy | 3.18 | 2017-07-12 |
| 2 | 5O61|1|A | Large subunit ribosomal RNA | 23S rRNA | Mycobacterium smegmatis | Bacteria | RF02541 | The complete structure of the Mycobacterium smegmatis 70S ribosome | Electron microscopy | 3.31 | 2017-07-12 |
| 3 | 5XYM|1|A | Large subunit ribosomal RNA | 23S RNA | Mycolicibacterium smegmatis | Bacteria | RF02541 | Large subunit of Mycobacterium smegmatis | Electron microscopy | 3.08 | 2017-09-27 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_64115.2 | NR_3.5_64115.1 | 2.148 | (2) 5O60|1|A, 5O61|1|A | (1) 5XYM|1|A | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.5_64115.2 | NR_3.5_64115.3 | 3.0 | (2) 5O60|1|A, 5XYM|1|A | (1) 5O61|1|A | (0) |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 5O60|1|A | Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis | ELECTRON MICROSCOPY | 3.18 | 3119 | |
| 2 | 5O61|1|A | The complete structure of the Mycobacterium smegmatis 70S ribosome | ELECTRON MICROSCOPY | 3.31 | 3119 | |
| 3 | 5XYM|1|A | Large subunit of Mycobacterium smegmatis | ELECTRON MICROSCOPY | 3.08 | 2665 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: