#IFECompound(s)RNA source organismTitleMethodResolutionDate
12QBG|B (rep)Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION3.32007-09-25
21VS6|BCrystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.X-RAY DIFFRACTION3.462006-09-26
31VS8|BCrystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.X-RAY DIFFRACTION3.462006-09-26
41VT2|ACrystal structure of the E. coli ribosome bound to CEM-101. This file contains the 50S subunit of the second 70S ribosome.X-RAY DIFFRACTION3.32010-10-06
52AW4|BCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. This file contains the 50S subunit of one 70S ribosome. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION3.462005-11-08
62AWB|BCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. This file contains the 50S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION3.462005-11-08
72GYA|0Structure of the 50S subunit of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152006-09-26
82GYC|0Structure of the 50S subunit of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152006-09-26
92I2T|BCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. This file contains the 50s subunit of one 70s ribosome. The entire crystal structure contains two 70s ribosomes and is described in remark 400.X-RAY DIFFRACTION3.222006-10-24
102I2V|BCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. This file contains the 50s subunit of one 70s ribosome. The entire crystal structure contains two 70s ribosomes and is described in remark 400.X-RAY DIFFRACTION3.222006-10-24
112J28|BEscherichia coliMODEL OF E. COLI SRP BOUND TO 70S RNCSELECTRON MICROSCOPY9.52006-11-08
122QAM|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. This file contains the 50S subunit of the first 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION3.212007-09-25
132QAO|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. This file contains the 50S subunit of the second 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION3.212007-09-25
142QBA|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. This file contains the 50S subunit of the first 70S ribosome, with gentamicin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION3.542007-09-25
152QBC|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. This file contains the 50S subunit of the second 70S ribosome, with gentamicin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION3.542007-09-25
162QBE|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the first 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION3.32007-09-25
172QBI|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the first 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION42007-09-25
182QBK|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION42007-09-25
192QOV|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. This file contains the 50S subunit of the first 70S ribosome. The entire crystal structure contains two 70S ribosomes.X-RAY DIFFRACTION3.932007-08-14
202QOX|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. This file contains the 50S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes.X-RAY DIFFRACTION3.932007-08-14
212QOZ|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. This file contains the 50S subunit of the first 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes.X-RAY DIFFRACTION3.52007-08-14
222QP1|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. This file contains the 50S subunit of the second 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes.X-RAY DIFFRACTION3.52007-08-14
232VHM|BStructure of PDF binding helix in complex with the ribosome (part 1 of 4)X-RAY DIFFRACTION3.742008-02-26
242VHN|BStructure of PDF binding helix in complex with the ribosome. (part 2 of 4)X-RAY DIFFRACTION3.742008-02-26
252WWQ|BE.COLI 70S RIBOSOME STALLED DURING TRANSLATION OF TNAC LEADER PEPTIDE. THIS FILE CONTAINS THE 50S, THE P-SITE TRNA AND THE TNAC LEADER PEPTIDE (PART 2 OF 2).ELECTRON MICROSCOPY5.82010-04-14
262Z4L|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). This file contains the 50S subunit of the first 70S ribosome, with paromomycin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION4.452007-09-25
272Z4N|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with paromomycin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.X-RAY DIFFRACTION4.452007-09-25
283BBX|BEscherichia coliThe Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexELECTRON MICROSCOPY102008-10-21
293DF2|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 50S subunit of the first 70S ribosome. The entire crystal structure contains two 70S ribosomes.X-RAY DIFFRACTION3.52008-08-19
303DF4|BCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 50S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes.X-RAY DIFFRACTION3.52008-08-19
313E1B|BStructure of the 50S subunit of E. coli ribosome in Pre-accommodation stateELECTRON MICROSCOPY92009-08-18
323E1D|BStructure of the 50S subunit of E. coli ribosome in Post-accommodation stateELECTRON MICROSCOPY92009-08-18
333FIK|BTernary complex-bound E.coli 70S ribosome. This entry consists of the 50S subunit.ELECTRON MICROSCOPY6.72009-02-24
343I1N|ACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192009-09-01
353I1P|ACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192009-09-01
363I1R|ACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812009-09-01
373I1T|ACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812009-09-01
383I20|ACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712009-09-01
393I22|ACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712009-09-01
403IZT|BStructural insights into cognate vs. near-cognate discrimination during decoding. This entry contains the large subunit of a ribosome programmed with a near-cognate codon.ELECTRON MICROSCOPY13.22011-03-23
413IZU|BStructural insights into cognate vs. near-cognate discrimination during decoding. This entry contains the large subunit of a ribosome programmed with a cognate codonELECTRON MICROSCOPY8.252011-03-23
423J01|8Structure of the ribosome-SecYE complex in the membrane environmentELECTRON MICROSCOPY7.12011-04-20
433J0T|BStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.12012-03-21
443J0W|BStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 4a of the six classes)ELECTRON MICROSCOPY14.72012-03-21
453J0Y|BStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 4b of the six classes)ELECTRON MICROSCOPY13.52012-03-21
463J11|BStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 3 of the six classes)ELECTRON MICROSCOPY13.12012-03-21
473J12|BStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 5 of the six classes)ELECTRON MICROSCOPY11.52012-03-21
483J14|BStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 6 of the six classes)ELECTRON MICROSCOPY11.52012-03-21
493J19|AStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading (50S subunit)ELECTRON MICROSCOPY8.32012-05-09
503J37|ATetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.82013-04-03
513J4X|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b, 50S subunit)ELECTRON MICROSCOPY122013-11-13
523J50|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2, 50S subunit)ELECTRON MICROSCOPY202013-11-13
533J51|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3, 50S subunit)ELECTRON MICROSCOPY172013-11-13
543J52|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a, 50S subunit)ELECTRON MICROSCOPY122013-11-13
553J54|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4, 50S subunit)ELECTRON MICROSCOPY132013-11-13
563J56|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a, 50S subunit)ELECTRON MICROSCOPY152013-11-13
573J58|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b, 50S subunit)ELECTRON MICROSCOPY172013-11-13
583J5A|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1, 50S subunit)ELECTRON MICROSCOPY122013-11-13
593J5C|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a, 50S subunit)ELECTRON MICROSCOPY172013-11-13
603J5E|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b, 50S subunit)ELECTRON MICROSCOPY172013-11-13
613J5G|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a, 50S subunit)ELECTRON MICROSCOPY202013-11-13
623J5I|AE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b, 50S subunit)ELECTRON MICROSCOPY152013-11-13
633J5K|AE. coli 70S-fMetVal-tRNAVal post-translocation complex (post4, 50S subunit)ELECTRON MICROSCOPY92013-11-13
643J5O|AVisualization of two tRNAs trapped in transit during EF-G-mediated translocation (50S subunit)ELECTRON MICROSCOPY6.82013-12-11
653J5U|AStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure, 50S subunit)ELECTRON MICROSCOPY7.62013-12-18
663J5W|AStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure, 50S subunit)ELECTRON MICROSCOPY7.62013-12-18
673KCR|8Ribosome-SecY complex. This entry 3KCR contains 50S ribosomal subnit. The 30S ribosomal subunit can be found in PDB entry 3KC4ELECTRON MICROSCOPY9.62010-03-02
683OAS|ACrystal structure of the E. coli ribosome bound to telithromycin. This file contains the 50S subunit of the second 70S ribosome.X-RAY DIFFRACTION3.252010-12-15
693OAT|ACrystal structure of the E. coli ribosome bound to telithromycin. This file contains the 50S subunit of the first 70S ribosome with telithromycin bound.X-RAY DIFFRACTION3.252010-12-15
703OFC|ACrystal structure of the E. coli ribosome bound to chloramphenicol. This file contains the 50S subunit of the first 70S ribosome with chloramphenicol bound.X-RAY DIFFRACTION3.192010-10-20
713OFD|ACrystal structure of the E. coli ribosome bound to chloramphenicol. This file contains the 50S subunit of the second 70S ribosome.X-RAY DIFFRACTION3.192010-10-20
723OFQ|ACrystal structure of the E. coli ribosome bound to erythromycin. This file contains the 50S subunit of the second 70S ribosome.X-RAY DIFFRACTION3.12010-10-13
733OFR|ACrystal structure of the E. coli ribosome bound to erythromycin. This file contains the 50S subunit of the first 70S ribosome with erthromycin bound.X-RAY DIFFRACTION3.12010-10-13
743OFZ|ACrystal structure of the E. coli ribosome bound to clindamycin. This file contains the 50S subunit of the first 70S ribosome bound to clindamycin.X-RAY DIFFRACTION3.292010-10-20
753OG0|ACrystal structure of the E. coli ribosome bound to clindamycin. This file contains the 50S subunit of the second 70S ribosome.X-RAY DIFFRACTION3.292010-10-20
763ORB|ACrystal structure of the E. coli ribosome bound to CEM-101. This file contains the 50S subunit of the first 70S ribosome bound to CEM-101.X-RAY DIFFRACTION3.32010-10-06
773R8S|AStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32011-06-01
783R8T|AStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32011-06-01
793SGF|ACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the RibosomeX-RAY DIFFRACTION3.22012-01-11
803UOS|ACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72012-01-11
814GAR|AAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32012-08-29
824GAU|AAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32012-08-29
834KIX|AControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92013-07-17
844KIZ|AControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92013-07-17
854KJ1|AControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92013-07-17
864KJ3|AControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92013-07-17
874KJ5|AControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92013-07-17
884KJ7|AControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92013-07-17
894KJ9|AControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92013-07-17
904KJB|AControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92013-07-17

Release history

Release1.411.421.431.441.451.461.471.481.491.501.511.521.531.54
Date2013-12-212013-12-282014-01-042014-01-112014-01-182014-01-252014-02-012014-02-082014-02-152014-02-222014-03-012014-03-082014-03-172014-03-22

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This classDescendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength