#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15DM6|1|Y (rep)5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal structure of the 50S ribosomal subunit from Deinococcus radioduransX-ray diffraction2.92015-11-11
24IOA|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radioduransX-ray diffraction3.22013-03-06
34IO9|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radioduransX-ray diffraction3.22013-03-06
42ZJR|1|Y5S ribosomal RNAribosomal 5S RNADeinococcus radioduransBacteriaRF00001Refined native structure of the large ribosomal subunit (50S) from Deinococcus radioduransX-ray diffraction2.912008-06-17
52ZJP|1|Z5S ribosomal RNARIBOSOMAL 5S RNADeinococcus radioduransBacteriaRF00001Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radioduransX-ray diffraction3.72008-06-17
62ZJQ|1|Y5S ribosomal RNAribosomal 5S RNADeinococcus radioduransBacteriaRF00001Interaction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunitX-ray diffraction3.32008-06-17
73CF5|1|Z5S ribosomal RNARRNA-5S RIBOSOMAL RNADeinococcus radioduransBacteriaRF00001Thiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radioduransX-ray diffraction3.32008-06-17
83DLL|1|Z5S ribosomal RNArRNA-5S ribosomal RNADeinococcus radioduransBacteriaRF00001The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioningX-ray diffraction3.52008-09-16
94IOC|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus radioduransX-ray diffraction3.62013-03-06
105DM7|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin AX-ray diffraction32015-11-11
113FWO|1|B5S ribosomal RNA5S RIBOSOMAL RNADeinococcus radioduransBacteriaRF00001The large ribosomal subunit from Deinococcus radiodurans complexed with MethymycinX-ray diffraction3.712010-01-19
121Y69|1|95S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radioduransX-ray diffraction3.332005-03-01
133JQ4|1|B5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001The structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidinX-ray diffraction3.522010-09-08
145JVG|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycinX-ray diffraction3.432016-11-09
155JVH|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001The crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with evernimicinX-ray diffraction3.582016-11-09
161XBP|1|95S ribosomal RNA5S RIBOSOMAL RNADeinococcus radioduransBacteriaRF00001Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with TiamulinX-ray diffraction3.52005-03-01
174U67|1|Y5S ribosomal RNA5s RNADeinococcus radioduransBacteriaRF00001Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22X-ray diffraction3.652015-08-05
183PIP|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-ray diffraction3.452011-02-23
191SM1|1|95S ribosomal RNA5S RIBOSOMAL RNADeinococcus radioduransBacteriaRF00001COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTINX-ray diffraction3.422004-08-03
201NWX|1|95S ribosomal RNA5S RIBOSOMAL RNADeinococcus radioduransBacteriaRF00001COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773X-ray diffraction3.52003-03-18
211NKW|1|95S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal Structure Of The Large Ribosomal Subunit From Deinococcus RadioduransX-ray diffraction3.12003-02-11
221NWY|1|95S ribosomal RNA5S RIBOSOMAL RRNADeinococcus radioduransBacteriaRF00001COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCINX-ray diffraction3.32003-03-18
233PIO|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-ray diffraction3.252011-02-23
244WFN|1|Y5S ribosomal RNA5S ribosomal RNADeinococcus radioduransBacteriaRF00001Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22 in complex with erythromycinX-ray diffraction3.542015-12-23

Release history

Release2.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.158
Date2016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-08

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13DLL|1|ZThe oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioningX-RAY DIFFRACTION3.5122
24IOA|1|YCrystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.2122
34IOC|1|YCrystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.6122
44IO9|1|YCrystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.2122
52ZJQ|1|YInteraction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunitX-RAY DIFFRACTION3.3122
63CF5|1|ZThiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.3122
72ZJR|1|YRefined native structure of the large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION2.91122
82ZJP|1|ZThiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.7122
93PIP|1|YCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.45120
103PIO|1|YCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.25120
114WFN|1|YCrystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22 in complex with erythromycinX-RAY DIFFRACTION3.54122
124U67|1|YCrystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22X-RAY DIFFRACTION3.65122
135JVH|1|YThe crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with evernimicinX-RAY DIFFRACTION3.58120
145JVG|1|YThe large ribosomal subunit from Deinococcus radiodurans in complex with avilamycinX-RAY DIFFRACTION3.43120
155DM6|1|YCrystal structure of the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION2.9122
165DM7|1|YCrystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin AX-RAY DIFFRACTION3122
173FWO|1|BThe large ribosomal subunit from Deinococcus radiodurans complexed with MethymycinX-RAY DIFFRACTION3.71118
183JQ4|1|BThe structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidinX-RAY DIFFRACTION3.52118
191Y69|1|9RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION3.33118
201XBP|1|9Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with TiamulinX-RAY DIFFRACTION3.5118
211NWX|1|9COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773X-RAY DIFFRACTION3.5118
221NKW|1|9Crystal Structure Of The Large Ribosomal Subunit From Deinococcus RadioduransX-RAY DIFFRACTION3.1118
231NWY|1|9COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCINX-RAY DIFFRACTION3.3118
241SM1|1|9COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTINX-RAY DIFFRACTION3.42118
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