#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18ISZ|1|C (rep)RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructStructure of procaryotic Ago with DNA-RNA complexElectron microscopy3.272023-10-18
28IT1|1|PRNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructCryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)Electron microscopy3.412023-11-08
38K9G|1|CRNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructThe Dimer Structure of procaryotic Ago with DNA and RNAElectron microscopy3.492023-10-18
48IT1|1|HRNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructCryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)Electron microscopy3.412023-11-08
58K9G|1|GRNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructThe Dimer Structure of procaryotic Ago with DNA and RNAElectron microscopy3.492023-10-18
68IT1|1|DRNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructCryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)Electron microscopy3.412023-11-08
78IT1|1|LRNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructCryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)Electron microscopy3.412023-11-08
88IT0|1|GRNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructThe Dimer Structure of procaryotic Ago with DNA and RNAElectron microscopy3.52023-10-18
98IT0|1|CRNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3')synthetic constructThe Dimer Structure of procaryotic Ago with DNA and RNAElectron microscopy3.52023-10-18

Release history

Release3.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.330
Date2023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_53815.1NR_4.0_17927.13.308(5) 8K9G|1|G, 8K9G|1|C, 8IT0|1|G, 8IT0|1|C, 8ISZ|1|C(4) 8IT1|1|P, 8IT1|1|L, 8IT1|1|H, 8IT1|1|D(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18ISZ|1|CStructure of procaryotic Ago with DNA-RNA complexELECTRON MICROSCOPY3.2721
28K9G|1|GThe Dimer Structure of procaryotic Ago with DNA and RNAELECTRON MICROSCOPY3.4921
38IT1|1|PCryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)ELECTRON MICROSCOPY3.4121
48IT1|1|HCryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)ELECTRON MICROSCOPY3.4121
58IT1|1|LCryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)ELECTRON MICROSCOPY3.4121
68IT1|1|DCryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)ELECTRON MICROSCOPY3.4121
78K9G|1|CThe Dimer Structure of procaryotic Ago with DNA and RNAELECTRON MICROSCOPY3.4921
88IT0|1|GThe Dimer Structure of procaryotic Ago with DNA and RNAELECTRON MICROSCOPY3.521
98IT0|1|CThe Dimer Structure of procaryotic Ago with DNA and RNAELECTRON MICROSCOPY3.521
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