BGSU RNA Site //

Equivalence class NR_4.0_95556.2 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
14V8U|1|CV (rep)Transfer RNAMRNA, RNAThermus thermophilusBacteriaRF00005Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-ray diffraction3.72014-07-09
24V8U|1|AVTransfer RNAMRNA, RNAThermus thermophilusBacteriaRF00005Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-ray diffraction3.72014-07-09
34V90|1|AVTransfer RNARNA (77-MER), 5'-R(*UP*AP*AP*AP*AP*AP*UP*GP*UP)-3'Thermus thermophilusBacteriaRF00005Thermus thermophilus RibosomeX-ray diffraction2.952014-07-09
44WT8|1|D3Transfer RNAA site tNA, E site tNAThermus thermophilusBacteriaRF00005Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-ray diffraction3.42015-01-21
54V5A|1|AV+ 4V5A|1|AXTransfer RNAP-SITE RNA ASL-PHE, MRNAsynthetic constructSyntheticRF00005Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
64V5A|1|CV+ 4V5A|1|CXTransfer RNAP-SITE RNA ASL-PHE, MRNAsynthetic constructSyntheticRF00005Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
74WT8|1|C3Transfer RNAA site tNA, E site tNAThermus thermophilusBacteriaRF00005Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-ray diffraction3.42015-01-21
84WT8|1|C2Transfer RNAA site tNA, E site tNA, mRNAThermus thermophilusBacteriaRF00005Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-ray diffraction3.42015-01-21

Release history

Release2.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.29
Date2015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_95556.2NR_all_95556.12.7(5) 4V5A|1|CV+4V5A|1|CX, 4V8U|1|AV, 4V90|1|AV, 4V5A|1|AV+4V5A|1|AX, 4V8U|1|CV(3) 4WT8|1|C3, 4WT8|1|D3, 4WT8|1|C2(2) 3BBV|1|z, 4V68|1|AW

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14WT8|1|D3Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.476
24WT8|1|C3Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.476
34WT8|1|C2Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.475
44V5A|1|CV+4V5A|1|CXStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.517
54V8U|1|AVCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.776
64V8U|1|CVCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.776
74V5A|1|AV+4V5A|1|AXStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.517
84V90|1|AVThermus thermophilus RibosomeX-RAY DIFFRACTION2.9576