Equivalence class NR_4.0_96870.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7ST2|1|5 (rep) | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII) | Electron microscopy | 2.9 | 2022-02-23 |
| 2 | 7ST6|1|5 | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Pre translocation, non-rotated 70S ribosome (Structure I) | Electron microscopy | 3 | 2022-02-23 |
| 3 | 7LV0|1|5 | Transfer RNA | tRNAPro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS) | Electron microscopy | 3.2 | 2021-07-28 |
| 4 | 7K54|1|5 | Transfer RNA | tRNAPro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS) | Electron microscopy | 3.2 | 2021-07-28 |
| 5 | 7K53|1|7 | Transfer RNA | tRNAPro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS) | Electron microscopy | 3.2 | 2021-07-28 |
| 6 | 7SSO|1|5 | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A) | Electron microscopy | 3.2 | 2022-02-23 |
| 7 | 7SSN|1|5 | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B) | Electron microscopy | 3.2 | 2022-02-23 |
| 8 | 7ST7|1|5 | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio) | Electron microscopy | 3.2 | 2022-02-23 |
| 9 | 7K55|1|5 | Transfer RNA | tRNAPro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS) | Electron microscopy | 3.3 | 2021-07-28 |
| 10 | 7SSD|1|5 | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Mid translocation intermediate with EF-G bound with GDP (Structure IV) | Electron microscopy | 3.3 | 2022-02-23 |
| 11 | 7K52|1|5 | Transfer RNA | tRNAPro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III) | Electron microscopy | 3.4 | 2021-07-28 |
| 12 | 7K50|1|7 | Transfer RNA | tRNAPro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Pre-translocation non-frameshifting(CCA-A) complex (Structure I) | Electron microscopy | 3.4 | 2021-07-28 |
| 13 | 7K51|1|5 | Transfer RNA | tRNAPro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II) | Electron microscopy | 3.5 | 2021-07-28 |
| 14 | 7SSL|1|5 | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III) | Electron microscopy | 3.8 | 2022-02-23 |
| 15 | 7SSW|1|5 | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Late translocation intermediate with EF-G dissociated (Structure VI) | Electron microscopy | 3.8 | 2022-02-23 |
| 16 | 7SS9|1|5 | Transfer RNA | tRNA Pro, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Late translocation intermediate with EF-G partially dissociated (Structure V) | Electron microscopy | 3.9 | 2022-02-23 |
Release history
| Release | 3.219 | 3.220 | 3.221 | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-23 | 2022-03-02 | 2022-03-09 | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7SSO|1|5 | Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A) | ELECTRON MICROSCOPY | 3.2 | 77 |
| 2 | 7ST6|1|5 | Pre translocation, non-rotated 70S ribosome (Structure I) | ELECTRON MICROSCOPY | 3 | 77 |
| 3 | 7K50|1|7 | Pre-translocation non-frameshifting(CCA-A) complex (Structure I) | ELECTRON MICROSCOPY | 3.4 | 77 |
| 4 | 7K53|1|7 | Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS) | ELECTRON MICROSCOPY | 3.2 | 77 |
| 5 | 7K52|1|5 | Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III) | ELECTRON MICROSCOPY | 3.4 | 77 |
| 6 | 7K55|1|5 | Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS) | ELECTRON MICROSCOPY | 3.3 | 77 |
| 7 | 7ST2|1|5 | Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII) | ELECTRON MICROSCOPY | 2.9 | 77 |
| 8 | 7K54|1|5 | Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS) | ELECTRON MICROSCOPY | 3.2 | 77 |
| 9 | 7K51|1|5 | Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II) | ELECTRON MICROSCOPY | 3.5 | 77 |
| 10 | 7SSD|1|5 | Mid translocation intermediate with EF-G bound with GDP (Structure IV) | ELECTRON MICROSCOPY | 3.3 | 77 |
| 11 | 7SS9|1|5 | Late translocation intermediate with EF-G partially dissociated (Structure V) | ELECTRON MICROSCOPY | 3.9 | 77 |
| 12 | 7SSW|1|5 | Late translocation intermediate with EF-G dissociated (Structure VI) | ELECTRON MICROSCOPY | 3.8 | 77 |
| 13 | 7LV0|1|5 | Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS) | ELECTRON MICROSCOPY | 3.2 | 77 |
| 14 | 7SSN|1|5 | Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B) | ELECTRON MICROSCOPY | 3.2 | 77 |
| 15 | 7ST7|1|5 | Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio) | ELECTRON MICROSCOPY | 3.2 | 76 |
| 16 | 7SSL|1|5 | Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III) | ELECTRON MICROSCOPY | 3.8 | 77 |