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Equivalence class NR_all_74023.4 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16S0X|1|a (rep)Small subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.Electron microscopy2.422019-08-21
25NGM|1|AaSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF001772.9S structure of the 70S ribosome composing the S. aureus 100S complexElectron microscopy2.92017-10-04
36S13|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).Electron microscopy3.582019-08-21
45ND8|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Hibernating ribosome from Staphylococcus aureus (Unrotated state)Electron microscopy3.72017-06-28
55ND9|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Hibernating ribosome from Staphylococcus aureus (Rotated state)Electron microscopy3.72017-06-28
65LI0|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF0017770S ribosome from Staphylococcus aureusElectron microscopy3.82016-12-28
75T7V|1|ASmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)Electron microscopy3.62017-05-31
85TCU|1|ASmall subunit ribosomal RNA16S RRNAStaphylococcus aureusBacteriaRF00177Methicillin sensitive Staphylococcus aureus 70S ribosomeElectron microscopy3.92017-05-24
96FXC|1|BaSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusElectron microscopy6.762018-03-21
106FXC|1|AaSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusElectron microscopy6.762018-03-21

Release history

Release3.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.162
Date2020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-20

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_74023.4NR_all_74023.33.151(10) 6FXC|1|Ba, 5TCU|1|A, 5ND9|1|a, 5LI0|1|a, 6S0X|1|a, 6FXC|1|Aa, 5NGM|1|Aa, 5ND8|1|a, 6S13|1|a, 5T7V|1|A(0) (2) 5NG8|1|Ba, 5NG8|1|Aa

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_74023.4NR_all_74023.53.163(10) 5T7V|1|A, 5NGM|1|Aa, 5ND9|1|a, 5ND8|1|a, 6S13|1|a, 5LI0|1|a, 6S0X|1|a, 6FXC|1|Ba, 6FXC|1|Aa, 5TCU|1|A(0) (2) 6YEF|1|a, 7KWG|1|a

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16S13|1|aErythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).ELECTRON MICROSCOPY3.581539
26S0X|1|aErythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.ELECTRON MICROSCOPY2.421539
36FXC|1|AaThe cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusELECTRON MICROSCOPY6.761539
46FXC|1|BaThe cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusELECTRON MICROSCOPY6.761539
55NGM|1|Aa2.9S structure of the 70S ribosome composing the S. aureus 100S complexELECTRON MICROSCOPY2.91539
65ND9|1|aHibernating ribosome from Staphylococcus aureus (Rotated state)ELECTRON MICROSCOPY3.71541
75ND8|1|aHibernating ribosome from Staphylococcus aureus (Unrotated state)ELECTRON MICROSCOPY3.71542
85LI0|1|a70S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.81547
95TCU|1|AMethicillin sensitive Staphylococcus aureus 70S ribosomeELECTRON MICROSCOPY3.91464
105T7V|1|AMethicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)ELECTRON MICROSCOPY3.61419
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